EY692550

Overview
NameEY692550
Unique NameEY692550
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY692550 vs. ExPASy Swiss-Prot
Match: ANXD6_ARATH (Annexin D6 OS=Arabidopsis thaliana GN=ANN6 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.739e-11
Identity = 55/191 (28.80%), Postives = 87/191 (45.55%), Query Frame = 3 
Query:  213 VWMLGSHERDAAVARQALEESVVNFKALIEILVGRKSSHIALIKQAYQTRYKRHLDQDIA-----NIEP-----PHPYQKAHNAD-VSQHVAKCDAKRLYETGEGSPGAAEKAV----VLEIFSKRSIPQMKLTFSCYKHIYGHDYTKSLKRGNSTDFEDALKMXVKCILNPPTITQRHCMXASRGXGGDK 740
            +W L   ERDA +A ++ +    N   L+EI   R S      KQAY  RYK  L++D+A     NI          ++   NAD V+  +A+ +AK L++         EKA     ++ I + RS  Q+  T + +K  +G    K LK  ++ D+   LK  +KC+  P    ++    A    G D+
Sbjct:   79 LWTLDPTERDAYLANESTKLFTKNIWVLVEIACTRPSLEFFKTKQAYHVRYKTSLEEDVAYHTSGNIRKLLVPLVSTFRYDGNADEVNVKLARSEAKTLHKK------ITEKAYTDEDLIRILTTRSKAQINATLNHFKDKFGSSINKFLKEDSNDDYVQLLKTAIKCLTYPEKYFEKVLRRAINRMGTDE 263
The following BLAST results are available for this feature:
BLAST of EY692550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
ANXD6_ARATH9.739e-1128.80Annexin D6 OS=Arabidopsis thaliana GN=ANN6 PE=2 SV... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-700-001-H02-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692550 ID=EY692550; Name=EY692550; organism=Citrus sinensis; type=EST; length=899bp
CCACGCGTCCGGTTCCTTGGCCTGCAAGGCTTGCCTGCATTATTTATTAA
GTCAATGAAACTCTCCATACTCCTGAAATGGCTTATAGTCTTTAGCTTCT
TCCACTTGGTGGCTTGGAAATTGGGGAGATTTTGAGGCATATGTGCGGTG
AAGACTTGCTAAAGAAGAGCAATATGGCTGGATTTTTGCCGAAAAACTGT
GCAGCATTGGATGTGTGGATGCTTGGTTCCCATGAGAGGGATGCTGCTGT
GGCTAGACAAGCACTTGAAGAAAGTGTTGTTAACTTCAAAGCTTTGATTG
AGATTCTTGTGGGAAGGAAATCAAGTCATATTGCCCTAATCAAACAAGCC
TATCAGACAAGATATAAAAGGCATCTGGACCAAGATATTGCCAATATTGA
GCCTCCCCATCCCTACCAAAAGGCACACAATGCAGATGTTAGCCAACATG
TTGCCAAATGTGATGCAAAAAGGCTTTATGAAACAGGGGAGGGCAGTCCA
GGAGCCGCCGAAAAAGCTGTTGTGCTGGAGATTTTCAGCAAAAGGAGCAT
CCCACAGATGAAGCTGACATTTTCTTGCTATAAACACATCTATGGACATG
ACTACACGAAGTCGCTTAAGAGGGGGAACTCCACGGATTTTGAAGATGCA
CTAAAAATGGNTGTCAAATGCATTCTNAATCCACCCACTATTACGCAAAG
ACACTGTATGNCAGCATCAAGGGGACNAGGGGGTGATAAGCCGCGGTGGC
ACGTGTGTTGGTGAGCAAAGCTGAGGTCGACATGGATGAGATTCAAGGAT
TTTTCAGAAAAATATGGGATGGACTGAGAGATGCATATGTGAGAGCATTC
ATCTGGGGATACAGAATTTTCTTGTGCTTTGGCACAAAGCAGACTGCTT
back to top