EY692527

Overview
NameEY692527
Unique NameEY692527
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length916
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY692527 vs. ExPASy Swiss-Prot
Match: CRYD_OSTTA (Cryptochrome DASH, chloroplastic/mitochondrial OS=Ostreococcus tauri GN=Ot01g06320 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.543e-11
Identity = 42/117 (35.90%), Postives = 60/117 (51.28%), Query Frame = 3 
Query:  453 RRASIVWFRNDLRVHDNESLNTA-----NNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESVSDLRKNLXARGSDLVVRVGKPXDCLVXVAKSIGAD--AVYAHREVSHDE 782
            R   ++WFRNDLR+ DN  +  A      +  V V+PVY FD   +  S  G  + G  R  F +E V DL+ +L A GSDL+VR GK  D +  +  +   D   +    EV+ +E
Sbjct:    3 RTRVVIWFRNDLRLLDNACVARAATLASESSDVEVVPVYVFDETYFKPSKRGLARFGAGRGKFTLECVGDLKTSLRALGSDLLVRCGKSRDVIAELTLTGANDRTIILTQTEVTSEE 119
The following BLAST results are available for this feature:
BLAST of EY692527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
CRYD_OSTTA1.543e-1135.90Cryptochrome DASH, chloroplastic/mitochondrial OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-001-F03-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692527 ID=EY692527; Name=EY692527; organism=Citrus sinensis; type=EST; length=916bp
CCACGCGTCCGCGGACGCGTGGGGGCAGCTTATCTCCATCCAGTTCAGCT
GCAACACAATTTTCATCTTCCATCTTTAGGGTTGAAATGGATCCCAATAA
GCAAAATCTTGAAAACCCAGAAAACCATTCCAATGAGGAACAAAACCCAC
TTGCGACTATCCCTTCTCAATCACCATTTGCCACTCTTTCCCTCTCATTT
TCTCTCCCCCAAGTCCTCCCAGCCAACACTTTCTTCATTCAACCCAAAAT
TTCCACCTTATTTTCCCACCAACCAAACAAGGTCAAAGTCCCCACACAAG
CCTCTACGCTTACCCACATCTCTCTCTCCGCCTCCTCCACTCTCTCTCCT
TCCAAAATTTCATTCAAGTCCACACTCTCCGCAAACCCTCTTCAGAGCCC
TCTCTCTTTAGGGCCCCACCGCCCCTTGGACCCGAACAATGGGGCCGCAA
TTCGTCGAGCTTCCATTGTTTGGTTCCGCAACGACTTGCGGGTCCATGAT
AACGAATCTCTCAACACCGCCAATAACGAGAGCGTCTCTGTTTTGCCTGT
TTATTGTTTCGACCCGAGGGATTACGGCAAATCCTCTTCTGGCTTTGACA
AAACGGGGCCGTATCGGGCATCGTTTTTGATTGAGTCAGTTTCTGACCTT
CGCAAGAACTTGCANGCACGTGGGTCTGATCTCGTGGTGAGAGTGGGAAA
GCCNNGAGACTGTCTGGTCGANGTGGCTAAAAGCATTGGAGCTGATGCAG
TGTACGCGCACAGAGAAGTGTCACATGATGAGGNNTAATCNNGAGAGAAN
GATGAGGCAGCGATGAAAGACGAAGGAATTGAAAGTGAGTACTTTTTGGG
AAGCACTTGTACCATCTGATGATTTGCCGTTTAGGTGGGGGAAATGCGAC
TANTATGGTGGGTTTA
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