EY692488

Overview
NameEY692488
Unique NameEY692488
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length915
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692488 vs. ExPASy Swiss-Prot
Match: CLK3_BOVIN (Dual specificity protein kinase CLK3 OS=Bos taurus GN=CLK3 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 5.091e-39
Identity = 75/160 (46.88%), Postives = 113/160 (70.62%), Query Frame = 2
Query:  320 EDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRER-KEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEY 793
            EDDK+GH +  +G+ L  RY+I   +GEGTFG+V+EC D  R K  VA+KI+R + KYREAA +EI VL+++ + DK     CV + +WF++  H+CI FE LG + ++FL++NN++ +P+  VR +A QL   + F+H+  + HTDLKPEN+L V+SE+
Sbjct:  137 EDDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEF 296          
BLAST of EY692488 vs. ExPASy Swiss-Prot
Match: CLK4_HUMAN (Dual specificity protein kinase CLK4 OS=Homo sapiens GN=CLK4 PE=1 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 5.629e-38
Identity = 84/190 (44.21%), Postives = 120/190 (63.16%), Query Frame = 2
Query:  233 APPRAPSDHVTSSSLFVKGLARNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEM-VAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYI 796
            +P R  + H +S     K   R  S    EDD++GH +   G+ L +RY+I   +GEG FG+V+EC D     M VA+KIV+ + +YREAA  EI+VL+ L   D     RCVQ+  WFD+  H+CIVFE LG S YDF+++N++  F ID +R++A Q+ + I F+H   + HTDLKPEN+L V S+Y+
Sbjct:  112 SPKRKRNRHCSSHQSRSKSHRRKRSRSI-EDDEEGHLICQSGDVLRARYEIVDTLGEGAFGKVVECIDHGMDGMHVAVKIVKNVGRYREAARSEIQVLEHLNSTDPNSVFRCVQMLEWFDHHGHVCIVFELLGLSTYDFIKENSFLPFQIDHIRQMAYQICQSINFLHHNKLTHTDLKPENILFVKSDYV 300          
BLAST of EY692488 vs. ExPASy Swiss-Prot
Match: CLKA_DICDI (Probable serine/threonine-protein kinase clkA OS=Dictyostelium discoideum GN=clkA PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 9.601e-38
Identity = 73/161 (45.34%), Postives = 108/161 (67.08%), Query Frame = 2
Query:  323 DDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR----CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEY 793
            DD++ +Y   +GE L +RYK+   +G GTF  V+ECWD      VAIKIVR  KKY E A++EI++L+ L K      +    C+++ + F +++HIC+VF++ G SLY+FL+KN YR  P+  ++ I++QLL  I  MH L ++HTDLKPEN+LL SS +
Sbjct:  572 DDENDYYKVQVGEYLNNRYKVLCTVGSGTFSTVVECWDTNSSGQVAIKIVRSAKKYTEDALVEIDILRNLEKTGNSNGKYLSHCIRLLDSFLFKDHICLVFKRYGLSLYEFLKKNRYRPLPLSQIQNISKQLLTAIYSMHKLSLVHTDLKPENILLESSRF 732          
BLAST of EY692488 vs. ExPASy Swiss-Prot
Match: CLK4_MOUSE (Dual specificity protein kinase CLK4 OS=Mus musculus GN=Clk4 PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 2.139e-37
Identity = 76/161 (47.20%), Postives = 110/161 (68.32%), Query Frame = 2
Query:  320 EDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEM-VAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYI 796
            EDD++GH +   G+ L +RY+I   +GEG FG+V+EC D     + VA+KIV+ + +YREAA  EI+VL+ L   D     RCVQ+  WFD+  H+CIVFE LG S YDF+++N++  F ID +R++A Q+ + I F+H   + HTDLKPEN+L V S+Y+
Sbjct:  140 EDDEEGHLICQSGDVLRARYEIVDTLGEGAFGKVVECIDHGMDGLHVAVKIVKNVGRYREAARSEIQVLEHLNSTDPNSVFRCVQMLEWFDHHGHVCIVFELLGLSTYDFIKENSFLPFQIDHIRQMAYQICQSINFLHHNKLTHTDLKPENILFVKSDYV 300          
BLAST of EY692488 vs. ExPASy Swiss-Prot
Match: CLK1_MOUSE (Dual specificity protein kinase CLK1 OS=Mus musculus GN=Clk1 PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 4.034e-36
Identity = 74/160 (46.25%), Postives = 110/160 (68.75%), Query Frame = 2
Query:  320 EDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRE-RKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEY 793
            EDD++GH +   G+ L++RY+I   +GEG FG+V+EC D +     VA+KIV+ + +Y EAA  EI+VL+ L   D     RCVQ+  WF++R HICIVFE LG S YDF+++N++  F +D +R++A Q+ + + F+H   + HTDLKPEN+L V S+Y
Sbjct:  141 EDDEEGHLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKVGGRRVAVKIVKNVDRYCEAAQSEIQVLEHLNTTDPHSTFRCVQMLEWFEHRGHICIVFELLGLSTYDFIKENSFLPFRMDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVKSDY 300          
BLAST of EY692488 vs. ExPASy Swiss-Prot
Match: CLK1_HUMAN (Dual specificity protein kinase CLK1 OS=Homo sapiens GN=CLK1 PE=1 SV=2)

HSP 1 Score: 150.599 bits (379), Expect = 1.174e-35
Identity = 73/160 (45.62%), Postives = 108/160 (67.50%), Query Frame = 2
Query:  320 EDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERK-EMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEY 793
            EDD++GH +   G+ L++RY+I   +GEG FG+V+EC D +     VA+KIV+ + +Y EAA  EI+VL+ L   D     RCVQ+  WF++  HICIVFE LG S YDF+++N +  F +D +R++A Q+ + + F+H   + HTDLKPEN+L V S+Y
Sbjct:  142 EDDEEGHLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDY 301          
BLAST of EY692488 vs. ExPASy Swiss-Prot
Match: KNS1_YEAST (Dual specificity protein kinase KNS1 OS=Saccharomyces cerevisiae GN=KNS1 PE=1 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 6.440e-34
Identity = 69/161 (42.86%), Postives = 106/161 (65.84%), Query Frame = 2
Query:  326 DKDGHYMFALGENLTS--RYKIHSKMGEGTFGQVLECWDRERK-EMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYI 796
            DKDGHY++   +   S  R+ +   +G+GTFG+VL+C D + +   VA+K++R + +YREAA  E+ +LQ +  +D  G  +C+ +R  FDY+NHIC+V +  G S+YDF+  N    FP   ++ IARQL+  + F+HDL +IHTDLKPEN+L+    +I
Sbjct:  294 DKDGHYVYQENDIFGSGGRFVVKDLLGQGTFGKVLKCIDNKYEPNYVAVKVIRAVDRYREAAKTELRILQTILNNDPQGQFQCLLLRECFDYKNHICLVTDLYGRSIYDFMCSNGIARFPGSHIQAIARQLIRSVCFLHDLGIIHTDLKPENILICDETHI 454          
BLAST of EY692488 vs. ExPASy Swiss-Prot
Match: POM1_SCHPO (Dual specificity protein kinase pom1 OS=Schizosaccharomyces pombe GN=pom1 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 8.704e-31
Identity = 61/161 (37.89%), Postives = 106/161 (65.84%), Query Frame = 2
Query:  299 NGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRC-VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLL 778
            N S  +  DD+ G Y   LG+++  RY++   +G+G+FGQVL C D E  ++VA+KI+R  K++   A++E ++LQ++ + D     C VQ  + F +R+H+C+  E LG +LY+ ++ N ++  PI +++ I RQL++C+  +++  +IH DLKPEN+LL
Sbjct:  673 NTSSNFGFDDERGDYKVVLGDHIAYRYEVVDFLGKGSFGQVLRCIDYETGKLVALKIIRNKKRFHMQALVETKILQKIREWDPLDEYCMVQYTDHFYFRDHLCVATELLGKNLYELIKSNGFKGLPIVVIKSITRQLIQCLTLLNEKHVIHCDLKPENILL 833          
BLAST of EY692488 vs. ExPASy Swiss-Prot
Match: DYRK4_MOUSE (Dual specificity tyrosine-phosphorylation-regulated kinase 4 OS=Mus musculus GN=Dyrk4 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 8.704e-31
Identity = 58/153 (37.91%), Postives = 103/153 (67.32%), Query Frame = 2
Query:  323 DDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLL 778
            DD+ G YM  L +++  RY++   +G+G+FGQV +C D +  E+VA+KI+R  K++   A++E+++L+ L + DK  N   V ++++F +RNH+CI FE LG +LY+ ++ N++  F + +VR     +L+C+  ++   +IH DLKPEN++L
Sbjct:  201 DDEHGSYMKVLHDHIAYRYEVLEMIGKGSFGQVAKCLDHKNNELVALKIIRNKKRFHHQALVELKILEALRRKDKDNNHNVVHMKDFFYFRNHLCITFELLGINLYELMKNNSFHGFNLSIVRRFTFSILKCLHMLYVEKIIHCDLKPENIVL 353          
BLAST of EY692488 vs. ExPASy Swiss-Prot
Match: DYRK4_HUMAN (Dual specificity tyrosine-phosphorylation-regulated kinase 4 OS=Homo sapiens GN=DYRK4 PE=1 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.939e-30
Identity = 58/153 (37.91%), Postives = 102/153 (66.67%), Query Frame = 2
Query:  323 DDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLL 778
            DD+ G Y+  L +++  RY++   +G+G+FGQV +C D +  E+VA+KI+R  K++ + A++E+++L+ L K DK      V ++++F +RNH CI FE LG +LY+ ++ NN++ F + +VR     +L+C+  +    +IH DLKPEN++L
Sbjct:   86 DDEHGFYLKVLHDHIAYRYEVLETIGKGSFGQVAKCLDHKNNELVALKIIRNKKRFHQQALMELKILEALRKKDKDNTYNVVHMKDFFYFRNHFCITFELLGINLYELMKNNNFQGFSLSIVRRFTLSVLKCLQMLSVEKIIHCDLKPENIVL 238          
The following BLAST results are available for this feature:
BLAST of EY692488 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
CLK3_BOVIN5.091e-3946.88Dual specificity protein kinase CLK3 OS=Bos taurus... [more]
CLK4_HUMAN5.629e-3844.21Dual specificity protein kinase CLK4 OS=Homo sapie... [more]
CLKA_DICDI9.601e-3845.34Probable serine/threonine-protein kinase clkA OS=D... [more]
CLK4_MOUSE2.139e-3747.20Dual specificity protein kinase CLK4 OS=Mus muscul... [more]
CLK1_MOUSE4.034e-3646.25Dual specificity protein kinase CLK1 OS=Mus muscul... [more]
CLK1_HUMAN1.174e-3545.63Dual specificity protein kinase CLK1 OS=Homo sapie... [more]
KNS1_YEAST6.440e-3442.86Dual specificity protein kinase KNS1 OS=Saccharomy... [more]
POM1_SCHPO8.704e-3137.89Dual specificity protein kinase pom1 OS=Schizosacc... [more]
DYRK4_MOUSE8.704e-3137.91Dual specificity tyrosine-phosphorylation-regulate... [more]
DYRK4_HUMAN1.939e-3037.91Dual specificity tyrosine-phosphorylation-regulate... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-700-001-B11-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692488 ID=EY692488; Name=EY692488; organism=Citrus sinensis; type=EST; length=915bp
CCACGCGTCCGATTTTATTCGTTCGTTTCAATCGCATCAAGATCTCGATC
TCTCTCTTATTTCCTCGCCGTGACCTGCGATCATGGAGATGGAGCGCGTG
ACGGAGTTTCCTTTTTCGAATCTGGATCGGCGTCCTCGTAAGCGAGCGCG
TTTGGGCTGGGACGTGCCTCAGGTACCGAAGGCTCAGGTAGGATTATTTT
GTGGACAAGAGGTTGGGAATGTAACAAGCTTTGCACCTCCAAGAGCTCCC
TCAGACCATGTCACTAGTTCTTCTCTATTTGTAAAGGGATTGGCTCGAAA
TGGTTCTCCCCCATGGCGTGAGGATGACAAAGATGGCCATTATATGTTTG
CGCTTGGAGAAAATTTAACTTCTCGCTATAAGATTCACAGCAAAATGGGT
GAAGGAACCTTCGGTCAGGTTTTGGAATGCTGGGATCGTGAGAGGAAAGA
AATGGTAGCCATTAAAATTGTTCGTGGGATCAAGAAATATCGTGAAGCTG
CTATGATAGAAATTGAAGTACTTCAACAACTTGCAAAACATGATAAAGGT
GGCAACCGTTGTGTGCAAATACGGAACTGGTTTGACTATCGTAACCATAT
CTGTATTGTGTTTGAGAAGCTTGGATCTAGCTTATACGATTTTCTACGGA
AAAACAATTATCGCTCATTTCCCATTGATCTTGTCCGTGAGATTGCCAGA
CAACTGTTGGAATGTATAGCATTTATGCATGATCTGTGTATGATACATAC
TGACTTAAAGCCTGAGAACGTTCTACTTGTTTCTTCCGAGTATATTAAGG
GTCCTGACTACAGAAGTCTTCGCACACACAAAAGATTCTTCTACTTTAAA
AGATGCAAAGTCAGTGCTATTAAGTGATTGATTGGCAGCACACTATGAGC
GCCAGATCGACTACT
back to top