EY692488

Overview
NameEY692488
Unique NameEY692488
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length915
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692488 vs. ExPASy Swiss-Prot
Match: SKY1_DICDI (Probable serine/threonine-protein kinase sky1 OS=Dictyostelium discoideum GN=sky1 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.793e-18
Identity = 65/199 (32.66%), Postives = 102/199 (51.26%), Query Frame = 2
Query:  305 SPPWREDDKDGHYMFALGENLTSRYKIHSKM---GEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC-MIHTDLKPENVLLVSS-EYIKGPDYRSLRTHKRFFYFKRCKVSAIK 874
            S  W  +DKD     +   + T+     S     G G  G V+        + VA+KIVR  + Y E A  EI++L  ++K++       ++ + F +R     H C+VFE LG++L D ++ + YR  PI LV+ + +Q L  + ++H  C +IHTDLKPENVLL  S ++    DY      +++ YFK    S+ K
Sbjct:  147 STVWLCNDKDTPITTSSSSSSTTTTTTSSSSNGNGNGNGGNVIGY------KQVALKIVRSARTYSETAEDEIKILNAISKYNAQDKCVARLLDHFTHRGPNGRHYCMVFELLGNNLLDLIKHHRYRGMPITLVKTLMKQTLIALDYIHTKCKIIHTDLKPENVLLEKSFDFFTSNDY---IWSEKYGYFKNRTSSSNK 336          
BLAST of EY692488 vs. ExPASy Swiss-Prot
Match: HIPK4_MACFA (Homeodomain-interacting protein kinase 4 OS=Macaca fascicularis GN=HIPK4 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.550e-16
Identity = 47/144 (32.64%), Postives = 78/144 (54.17%), Query Frame = 2
Query:  350 ALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV 781
            A  ++ T  Y I   +G+GTFG+V + W R   EMVAIKI++           E+++L  +   D      ++   +F       +VFE L  +L++F ++NN+   P   +R +  Q+L  +A + +L +IH DLKPEN++LV
Sbjct:    2 ATTQSETDCYDIIEVLGKGTFGEVAKGWRRSTGEMVAIKILKNDAYRNRIIKNELKLLHCMRGLDPEEAHVIRFLEFFHDALKFYLVFELLEQNLFEFQKENNFAPLPARHIRTVTLQVLRALARLKELAIIHADLKPENIMLV 145          
BLAST of EY692488 vs. ExPASy Swiss-Prot
Match: HIPK4_RAT (Homeodomain-interacting protein kinase 4 OS=Rattus norvegicus GN=Hipk4 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.637e-16
Identity = 46/138 (33.33%), Postives = 76/138 (55.07%), Query Frame = 2
Query:  368 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV 781
            T  Y I   +G+GTFG+V + W R   EMVAIKI++           E+++L+ +   D      ++   +F       +VFE L  +L++F ++NN+   P   +R +  Q+L  +A + +L +IH DLKPEN++LV
Sbjct:    8 TDCYDIIEVLGKGTFGEVAKGWRRSTGEMVAIKILKNDAYRSRIIKNELKLLRCVRGLDPDEAHVIRFLEFFHDALKFYLVFELLEQNLFEFQKENNFAPLPARHIRTVTLQVLRALARLKELAIIHADLKPENIMLV 145          
BLAST of EY692488 vs. ExPASy Swiss-Prot
Match: HIPK4_MOUSE (Homeodomain-interacting protein kinase 4 OS=Mus musculus GN=Hipk4 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 4.637e-16
Identity = 46/138 (33.33%), Postives = 76/138 (55.07%), Query Frame = 2
Query:  368 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV 781
            T  Y I   +G+GTFG+V + W R   EMVAIKI++           E+++L+ +   D      ++   +F       +VFE L  +L++F ++NN+   P   +R +  Q+L  +A + +L +IH DLKPEN++LV
Sbjct:    8 TDCYDIIEVLGKGTFGEVAKGWRRSTGEMVAIKILKNDAYRSRIIKNELKLLRCVRGLDPDEAHVIRFLEFFHDALKFYLVFELLEQNLFEFQKENNFAPLPARHIRTVTLQVLRALARLKELAIIHADLKPENIMLV 145          
BLAST of EY692488 vs. ExPASy Swiss-Prot
Match: PRP4B_RAT (Serine/threonine-protein kinase PRP4 homolog OS=Rattus norvegicus GN=Prpf4b PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.056e-16
Identity = 48/160 (30.00%), Postives = 86/160 (53.75%), Query Frame = 2
Query:  326 DKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRER-KEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRK-NNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYI 796
            D +G+Y   +GE L  RY ++   G+G F  V+   D  R  + VA+KI+R  +  ++  + E+E L++L   D      C+++   F ++ H+C+VFE L  +L + L+K        I  VR  ++QL   +  +    ++H D+KP+N+L+  S+ I
Sbjct:  670 DAEGYYRVNIGEVLDKRYNVYGYTGQGVFSNVVRARDNARANQEVAVKIIRNNELMQKTGLKELEFLKKLNDADPDDKFHCLRLFRHFYHKQHLCLVFEPLSMNLREVLKKYGKDVGLHIKAVRSYSQQLFLALKLLKRCNILHADIKPDNILVNESKTI 829          
BLAST of EY692488 vs. ExPASy Swiss-Prot
Match: PRP4B_PONAB (Serine/threonine-protein kinase PRP4 homolog OS=Pongo abelii GN=PRPF4B PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.056e-16
Identity = 48/160 (30.00%), Postives = 86/160 (53.75%), Query Frame = 2
Query:  326 DKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRER-KEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRK-NNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYI 796
            D +G+Y   +GE L  RY ++   G+G F  V+   D  R  + VA+KI+R  +  ++  + E+E L++L   D      C+++   F ++ H+C+VFE L  +L + L+K        I  VR  ++QL   +  +    ++H D+KP+N+L+  S+ I
Sbjct:  670 DAEGYYRVNIGEVLDKRYNVYGYTGQGVFSNVVRARDNARASQEVAVKIIRNNELMQKTGLKELEFLKKLNDADPDDKFHCLRLFRHFYHKQHLCLVFEPLSMNLREVLKKYGKDVGLHIKAVRSYSQQLFLALKLLKRCNILHADIKPDNILVNESKTI 829          
BLAST of EY692488 vs. ExPASy Swiss-Prot
Match: PRP4B_MOUSE (Serine/threonine-protein kinase PRP4 homolog OS=Mus musculus GN=Prpf4b PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 6.056e-16
Identity = 48/160 (30.00%), Postives = 86/160 (53.75%), Query Frame = 2
Query:  326 DKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRER-KEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRK-NNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYI 796
            D +G+Y   +GE L  RY ++   G+G F  V+   D  R  + VA+KI+R  +  ++  + E+E L++L   D      C+++   F ++ H+C+VFE L  +L + L+K        I  VR  ++QL   +  +    ++H D+KP+N+L+  S+ I
Sbjct:  670 DAEGYYRVNIGEVLDKRYNVYGYTGQGVFSNVVRARDNARANQEVAVKIIRNNELMQKTGLKELEFLKKLNDADPDDKFHCLRLFRHFYHKQHLCLVFEPLSMNLREVLKKYGKDVGLHIKAVRSYSQQLFLALKLLKRCNILHADIKPDNILVNESKTI 829          
BLAST of EY692488 vs. ExPASy Swiss-Prot
Match: PRP4B_HUMAN (Serine/threonine-protein kinase PRP4 homolog OS=Homo sapiens GN=PRPF4B PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 6.056e-16
Identity = 48/160 (30.00%), Postives = 86/160 (53.75%), Query Frame = 2
Query:  326 DKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRER-KEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRK-NNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYI 796
            D +G+Y   +GE L  RY ++   G+G F  V+   D  R  + VA+KI+R  +  ++  + E+E L++L   D      C+++   F ++ H+C+VFE L  +L + L+K        I  VR  ++QL   +  +    ++H D+KP+N+L+  S+ I
Sbjct:  670 DAEGYYRVNIGEVLDKRYNVYGYTGQGVFSNVVRARDNARANQEVAVKIIRNNELMQKTGLKELEFLKKLNDADPDDKFHCLRLFRHFYHKQHLCLVFEPLSMNLREVLKKYGKDVGLHIKAVRSYSQQLFLALKLLKRCNILHADIKPDNILVNESKTI 829          
BLAST of EY692488 vs. ExPASy Swiss-Prot
Match: PRP4B_BOVIN (Serine/threonine-protein kinase PRP4 homolog OS=Bos taurus GN=PRPF4B PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.056e-16
Identity = 48/160 (30.00%), Postives = 86/160 (53.75%), Query Frame = 2
Query:  326 DKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRER-KEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRK-NNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYI 796
            D +G+Y   +GE L  RY ++   G+G F  V+   D  R  + VA+KI+R  +  ++  + E+E L++L   D      C+++   F ++ H+C+VFE L  +L + L+K        I  VR  ++QL   +  +    ++H D+KP+N+L+  S+ I
Sbjct:  671 DAEGYYRVNIGEVLDKRYNVYGYTGQGVFSNVVRARDNARANQEVAVKIIRNNELMQKTGLKELEFLKKLNDADPDDKFHCLRLFRHFYHKQHLCLVFEPLSMNLREVLKKYGKDVGLHIKAVRSYSQQLFLALKLLKRCNILHADIKPDNILVNESKTI 830          
BLAST of EY692488 vs. ExPASy Swiss-Prot
Match: HIPK4_HUMAN (Homeodomain-interacting protein kinase 4 OS=Homo sapiens GN=HIPK4 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.056e-16
Identity = 46/138 (33.33%), Postives = 75/138 (54.35%), Query Frame = 2
Query:  368 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV 781
            T  Y I   +G+GTFG+V + W R   EMVAIKI++           E+++L  +   D      ++   +F       +VFE L  +L++F ++NN+   P   +R +  Q+L  +A + +L +IH DLKPEN++LV
Sbjct:    8 TDCYDIIEVLGKGTFGEVAKGWRRSTGEMVAIKILKNDAYRNRIIKNELKLLHCMRGLDPEEAHVIRFLEFFHDALKFYLVFELLEQNLFEFQKENNFAPLPARHIRTVTLQVLTALARLKELAIIHADLKPENIMLV 145          
The following BLAST results are available for this feature:
BLAST of EY692488 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
SKY1_DICDI3.793e-1832.66Probable serine/threonine-protein kinase sky1 OS=D... [more]
HIPK4_MACFA3.550e-1632.64Homeodomain-interacting protein kinase 4 OS=Macaca... [more]
HIPK4_RAT4.637e-1633.33Homeodomain-interacting protein kinase 4 OS=Rattus... [more]
HIPK4_MOUSE4.637e-1633.33Homeodomain-interacting protein kinase 4 OS=Mus mu... [more]
PRP4B_RAT6.056e-1630.00Serine/threonine-protein kinase PRP4 homolog OS=Ra... [more]
PRP4B_PONAB6.056e-1630.00Serine/threonine-protein kinase PRP4 homolog OS=Po... [more]
PRP4B_MOUSE6.056e-1630.00Serine/threonine-protein kinase PRP4 homolog OS=Mu... [more]
PRP4B_HUMAN6.056e-1630.00Serine/threonine-protein kinase PRP4 homolog OS=Ho... [more]
PRP4B_BOVIN6.056e-1630.00Serine/threonine-protein kinase PRP4 homolog OS=Bo... [more]
HIPK4_HUMAN6.056e-1633.33Homeodomain-interacting protein kinase 4 OS=Homo s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-001-B11-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692488 ID=EY692488; Name=EY692488; organism=Citrus sinensis; type=EST; length=915bp
CCACGCGTCCGATTTTATTCGTTCGTTTCAATCGCATCAAGATCTCGATC
TCTCTCTTATTTCCTCGCCGTGACCTGCGATCATGGAGATGGAGCGCGTG
ACGGAGTTTCCTTTTTCGAATCTGGATCGGCGTCCTCGTAAGCGAGCGCG
TTTGGGCTGGGACGTGCCTCAGGTACCGAAGGCTCAGGTAGGATTATTTT
GTGGACAAGAGGTTGGGAATGTAACAAGCTTTGCACCTCCAAGAGCTCCC
TCAGACCATGTCACTAGTTCTTCTCTATTTGTAAAGGGATTGGCTCGAAA
TGGTTCTCCCCCATGGCGTGAGGATGACAAAGATGGCCATTATATGTTTG
CGCTTGGAGAAAATTTAACTTCTCGCTATAAGATTCACAGCAAAATGGGT
GAAGGAACCTTCGGTCAGGTTTTGGAATGCTGGGATCGTGAGAGGAAAGA
AATGGTAGCCATTAAAATTGTTCGTGGGATCAAGAAATATCGTGAAGCTG
CTATGATAGAAATTGAAGTACTTCAACAACTTGCAAAACATGATAAAGGT
GGCAACCGTTGTGTGCAAATACGGAACTGGTTTGACTATCGTAACCATAT
CTGTATTGTGTTTGAGAAGCTTGGATCTAGCTTATACGATTTTCTACGGA
AAAACAATTATCGCTCATTTCCCATTGATCTTGTCCGTGAGATTGCCAGA
CAACTGTTGGAATGTATAGCATTTATGCATGATCTGTGTATGATACATAC
TGACTTAAAGCCTGAGAACGTTCTACTTGTTTCTTCCGAGTATATTAAGG
GTCCTGACTACAGAAGTCTTCGCACACACAAAAGATTCTTCTACTTTAAA
AGATGCAAAGTCAGTGCTATTAAGTGATTGATTGGCAGCACACTATGAGC
GCCAGATCGACTACT
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