EY692485 | Citrus Genome Database

Overview


Name	EY692485
Unique Name	EY692485
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	889

Libraries


Library Name	Type
Sweet orange fruit, development stadium (1 of 6)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY692485 vs. ExPASy Swiss-Prot
Match: ACT7_ARATH (Actin-7 OS=Arabidopsis thaliana GN=ACT7 PE=1 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 6.902e-86
Identity = 168/213 (78.87%), Postives = 182/213 (85.45%), Query Frame = -3

Query:  210 IYEGMP-PTCNTRLDLA---VVTSLILMKNPH*AWVLFHHHGGA*IVRDMKEKLAYIALDYXQELETSKTSSAVEKSYELXDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 836
            IYEG   P    RLDLA   +  SL+ +        +F       IVRD+KEKLAY+ALDY QELET+K+SS+VEK+YEL DGQVITIGAERFRCPEVLFQPS+IGMEA GIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K+EYDESGPSIVHRKCF
Sbjct:  167 IYEGYALPHAILRLDLAGRDLTDSLMKILTER--GYMFTTTAEREIVRDIKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQVITIGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKSEYDESGPSIVHRKCF 377

[Close]

BLAST of EY692485 vs. ExPASy Swiss-Prot
Match: ACT2_PEA (Actin-2 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 6.902e-86
Identity = 168/211 (79.62%), Postives = 181/211 (85.78%), Query Frame = -3

Query:  210 IYEGMP-PTCNTRLDLAVVT-SLILMKNPH*AWVLFHHHGGA*IVRDMKEKLAYIALDYXQELETSKTSSAVEKSYELXDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 836
            IYEG   P    RLDLA    +  LMK       +F       IVRD+KEKLAY+ALDY QELET+K+SS++EK+YEL DGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEI+ALAPSSMKIKVVAPPER+YSVWIGGSILASLSTFQQMWI+KAEYDE GPSIVHRKCF
Sbjct:  166 IYEGYALPHAILRLDLAGRDLTESLMKILTERGYMFTTSAEREIVRDIKEKLAYVALDYEQELETAKSSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERRYSVWIGGSILASLSTFQQMWISKAEYDERGPSIVHRKCF 376

[Close]

BLAST of EY692485 vs. ExPASy Swiss-Prot
Match: ACT_CHLRE (Actin OS=Chlamydomonas reinhardtii PE=2 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 7.284e-86
Identity = 143/168 (85.12%), Postives = 159/168 (94.64%), Query Frame = -3

Query:  210 IVRDMKEKLAYIALDYXQELETSKTSSAVEKSYELXDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 713
            IVRD+KEKL Y+ALD+ QE+ T+ +SSA+EK+YEL DGQ+ITIG ERFRCPEVLF P+MIGMEA GIH+TT+NSIMKCDVDIRKDLY NIVLSGG+TMFPGIADRMSKEI+ALAPS+MKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAK+EYDESGPSIVHRKCF
Sbjct:  210 IVRDIKEKLCYVALDFEQEMATALSSSALEKTYELPDGQMITIGNERFRCPEVLFNPNMIGMEAVGIHDTTFNSIMKCDVDIRKDLYNNIVLSGGTTMFPGIADRMSKEITALAPSAMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 377

HSP 2 Score: 43.1282 bits (100), Expect = 7.284e-86
Identity = 29/48 (60.42%), Postives = 31/48 (64.58%), Query Frame = -1

Query:  710 HTV-LYMRVCLPHAILVLTLLS*P-H*Y**KILTERGYSFTTTAEREL 847
            HTV +Y    LPHAIL L L       Y  KIL ERGYSFTTTAERE+
Sbjct:  163 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILMERGYSFTTTAEREI 210

[Close]

BLAST of EY692485 vs. ExPASy Swiss-Prot
Match: ACTC_HALRO (Actin, nonmuscle OS=Halocynthia roretzi GN=CA1 PE=3 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 7.284e-86
Identity = 140/168 (83.33%), Postives = 155/168 (92.26%), Query Frame = -3

Query:  210 IVRDMKEKLAYIALDYXQELETSKTSSAVEKSYELXDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 713
            IVRD+KEKLAY+ALD+  E++T+ TSS++EKSYEL DGQVIT+G ERFRCPE LFQPS +GME+AGIHETTYNSIMKCDVDIRKDLY N VLSGGSTMFPGIADRM KEI ALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  209 IVRDIKEKLAYVALDFETEMQTAATSSSIEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEIVALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376

HSP 2 Score: 45.4394 bits (106), Expect = 7.284e-86
Identity = 30/48 (62.50%), Postives = 32/48 (66.67%), Query Frame = -1

Query:  710 HTV-LYMRVCLPHAILVLTLLS*P-H*Y**KILTERGYSFTTTAEREL 847
            HTV +Y    LPHAIL L L       Y  KILTERGYSFTTTAERE+
Sbjct:  162 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREI 209

[Close]

BLAST of EY692485 vs. ExPASy Swiss-Prot
Match: ACTC_PISOC (Actin, cytoplasmic OS=Pisaster ochraceus PE=3 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 9.501e-86
Identity = 139/168 (82.74%), Postives = 156/168 (92.86%), Query Frame = -3

Query:  210 IVRDMKEKLAYIALDYXQELETSKTSSAVEKSYELXDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 713
            IVRD+KEKL Y+ALD+ QE++T+ +SS++EKSYEL DGQVITIG ERFRCPE LFQPS +GME+AGIHETTYNSIMKCDVDIRKDLY N VLSGGSTMFPGIADRM KE++ALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  209 IVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEVTALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376

HSP 2 Score: 45.4394 bits (106), Expect = 9.501e-86
Identity = 30/48 (62.50%), Postives = 32/48 (66.67%), Query Frame = -1

Query:  710 HTV-LYMRVCLPHAILVLTLLS*P-H*Y**KILTERGYSFTTTAEREL 847
            HTV +Y    LPHAIL L L       Y  KILTERGYSFTTTAERE+
Sbjct:  162 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREI 209

[Close]

BLAST of EY692485 vs. ExPASy Swiss-Prot
Match: ACTC_HELTI (Actin, cytoplasmic OS=Helisoma trivolvis PE=3 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 1.239e-85
Identity = 139/168 (82.74%), Postives = 156/168 (92.86%), Query Frame = -3

Query:  210 IVRDMKEKLAYIALDYXQELETSKTSSAVEKSYELXDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 713
            IVRD+KEKL Y+ALD+ QE++T+ TSS++EKSYEL DGQVITIG ERFRCPE ++QPS +GME+AGIHETTYNSIMKCDVDIRKDLY N VLSGGSTMFPGIADRM KEI+ALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  209 IVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITIGNERFRCPEAMYQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376

HSP 2 Score: 44.669 bits (104), Expect = 1.239e-85
Identity = 29/48 (60.42%), Postives = 32/48 (66.67%), Query Frame = -1

Query:  710 HTV-LYMRVCLPHAILVLTLLS*P-H*Y**KILTERGYSFTTTAEREL 847
            HTV +Y    LPHAI+ L L       Y  KILTERGYSFTTTAERE+
Sbjct:  162 HTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAEREI 209

[Close]

BLAST of EY692485 vs. ExPASy Swiss-Prot
Match: ACTC_BIOPF (Actin, cytoplasmic OS=Biomphalaria pfeifferi PE=3 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 1.617e-85
Identity = 140/168 (83.33%), Postives = 155/168 (92.26%), Query Frame = -3

Query:  210 IVRDMKEKLAYIALDYXQELETSKTSSAVEKSYELXDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 713
            IVRD+KEKL Y+ALD+ QE+ T+ TSS++EKSYEL DGQVITIG ERFRCPE +FQPS +GME+AGIHETTYNSIMKCDVDIRKDLY N VLSGGSTMFPGIADRM KEI+ALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  209 IVRDIKEKLCYVALDFEQEMHTAATSSSLEKSYELPDGQVITIGNERFRCPEAVFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376

HSP 2 Score: 44.669 bits (104), Expect = 1.617e-85
Identity = 29/48 (60.42%), Postives = 32/48 (66.67%), Query Frame = -1

Query:  710 HTV-LYMRVCLPHAILVLTLLS*P-H*Y**KILTERGYSFTTTAEREL 847
            HTV +Y    LPHAI+ L L       Y  KILTERGYSFTTTAERE+
Sbjct:  162 HTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAEREI 209

[Close]

BLAST of EY692485 vs. ExPASy Swiss-Prot
Match: ACT5C_ANOGA (Actin-5C OS=Anopheles gambiae GN=Act5C PE=2 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 2.751e-85
Identity = 139/168 (82.74%), Postives = 155/168 (92.26%), Query Frame = -3

Query:  210 IVRDMKEKLAYIALDYXQELETSKTSSAVEKSYELXDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 713
            IVRD+KEKL Y+ALD+ QE+ T+ +SS++EKSYEL DGQVITIG ERFRCPE LFQPS +GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGG+TM+PGIADRM KEI+ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  209 IVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376

HSP 2 Score: 45.4394 bits (106), Expect = 2.751e-85
Identity = 30/48 (62.50%), Postives = 32/48 (66.67%), Query Frame = -1

Query:  710 HTV-LYMRVCLPHAILVLTLLS*P-H*Y**KILTERGYSFTTTAEREL 847
            HTV +Y    LPHAIL L L       Y  KILTERGYSFTTTAERE+
Sbjct:  162 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREI 209

[Close]

BLAST of EY692485 vs. ExPASy Swiss-Prot
Match: ACT4_BOMMO (Actin, cytoplasmic A4 OS=Bombyx mori GN=A4 PE=2 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 2.751e-85
Identity = 139/168 (82.74%), Postives = 155/168 (92.26%), Query Frame = -3

Query:  210 IVRDMKEKLAYIALDYXQELETSKTSSAVEKSYELXDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 713
            IVRD+KEKL Y+ALD+ QE+ T+ +SS++EKSYEL DGQVITIG ERFRCPE LFQPS +GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGG+TM+PGIADRM KEI+ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  209 IVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376

HSP 2 Score: 45.4394 bits (106), Expect = 2.751e-85
Identity = 30/48 (62.50%), Postives = 32/48 (66.67%), Query Frame = -1

Query:  710 HTV-LYMRVCLPHAILVLTLLS*P-H*Y**KILTERGYSFTTTAEREL 847
            HTV +Y    LPHAIL L L       Y  KILTERGYSFTTTAERE+
Sbjct:  162 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREI 209

[Close]

BLAST of EY692485 vs. ExPASy Swiss-Prot
Match: ACT3B_HELAM (Actin-A3b, cytoplasmic OS=Helicoverpa armigera GN=actA3b PE=2 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 2.751e-85
Identity = 139/168 (82.74%), Postives = 155/168 (92.26%), Query Frame = -3

Query:  210 IVRDMKEKLAYIALDYXQELETSKTSSAVEKSYELXDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 713
            IVRD+KEKL Y+ALD+ QE+ T+ +SS++EKSYEL DGQVITIG ERFRCPE LFQPS +GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGG+TM+PGIADRM KEI+ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  209 IVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376

HSP 2 Score: 45.4394 bits (106), Expect = 2.751e-85
Identity = 30/48 (62.50%), Postives = 32/48 (66.67%), Query Frame = -1

Query:  710 HTV-LYMRVCLPHAILVLTLLS*P-H*Y**KILTERGYSFTTTAEREL 847
            HTV +Y    LPHAIL L L       Y  KILTERGYSFTTTAERE+
Sbjct:  162 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREI 209

The following BLAST results are available for this feature:

BLAST of EY692485 vs. ExPASy Swiss-Prot

BLAST of EY692485 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 479


Match Name	E-value	Identity	Description
ACT7_ARATH	6.902e-86	78.87	Actin-7 OS=Arabidopsis thaliana GN=ACT7 PE=1 SV=1	[more]
ACT2_PEA	6.902e-86	79.62	Actin-2 OS=Pisum sativum PE=2 SV=1	[more]
ACT_CHLRE	7.284e-86	85.12	Actin OS=Chlamydomonas reinhardtii PE=2 SV=1	[more]
ACTC_HALRO	7.284e-86	83.33	Actin, nonmuscle OS=Halocynthia roretzi GN=CA1 PE=...	[more]
ACTC_PISOC	9.501e-86	82.74	Actin, cytoplasmic OS=Pisaster ochraceus PE=3 SV=1	[more]
ACTC_HELTI	1.239e-85	82.74	Actin, cytoplasmic OS=Helisoma trivolvis PE=3 SV=1	[more]
ACTC_BIOPF	1.617e-85	83.33	Actin, cytoplasmic OS=Biomphalaria pfeifferi PE=3 ...	[more]
ACT5C_ANOGA	2.751e-85	82.74	Actin-5C OS=Anopheles gambiae GN=Act5C PE=2 SV=1	[more]
ACT4_BOMMO	2.751e-85	82.74	Actin, cytoplasmic A4 OS=Bombyx mori GN=A4 PE=2 SV...	[more]
ACT3B_HELAM	2.751e-85	82.74	Actin-A3b, cytoplasmic OS=Helicoverpa armigera GN=...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C3-700-001-B08-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY692485 ID=EY692485; Name=EY692485; organism=Citrus sinensis; type=EST; length=889bp
CCACGCGTCCGTTTTTTTTTTTCAAAAAACTTCTCATAATAGATGAGAAT
GAAAGAACTTGACCATTTTGAAAATCAACTCAGCCTTCTCAAAGTCATCG
CTCCAACACGAAAATAAACACATGGATAACAAAGCTAAAATGAAAAAAGG
TTGCAAACTGCAATTGGAAAACAGTAATTCTTTCAAAAATCCTATTGGTG
AACAGTTTAGAAGCACTTTCTATGCACAATTGATGGCCCGGACTCGTCAT
ACTCAGCCTTTGCAATCCACATCTGCTGGAATGTGCTAAGAGAAGCCAAG
ATGGAGCCTCCTATCCAGACACTATACTTCCTCTCAGGTGGTGCCACTAC
CTTAATCTTCATGCTGCTTGGGGCTAGGGCAGAAATTTCCTTGCTCATTC
TATCGGCAATGCCAGGGAACATAGTGGAACCACCACTGAGGACAATGTTG
CCGTACAGGTCTTTTCTGATATCAACATCGCACTTCATGATGGAGTTGTA
AGTGGTCTCGTGGATGCCTGCTGCTTCCATACCAATCATGGATGGTTGGA
AAAGGACCTCAGGACACCTGAAACGCTCAGCGCCAATAGTGATAACCTGC
CCATCANGCAACTCATAGCTCTTCTCAACTGCAGAGCTGGTCTTGGAAGT
CTCAAGCTCCTGNTCATAGTCAAGAGCGATGTAAGCCAGCTTTTCCTTCA
TGTCCCTGACAATTCACGCTCCGCCGTGGTGGTGAAAGAGTACCCACGCT
CAGTGAGGATTTTTCATCAGTATCAGTGAGGTCACGACAGCAAGGTCAAG
ACGAGTATTGCATGTGGGAGGCATACCCTCATATATAAGACTGTATGCTG
ACACATCACAGAGTCAACCCATTACAGGGTACGACCTCC