EY692458 | Citrus Genome Database

Overview


Name	EY692458
Unique Name	EY692458
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	749

Libraries


Library Name	Type
Sweet orange bark, greenhouse plant	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY692458 vs. ExPASy Swiss-Prot
Match: HSP70_MAIZE (Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=3 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 2.089e-42
Identity = 85/99 (85.86%), Postives = 91/99 (91.92%), Query Frame = 2

Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEF 298
            TTGQKNKITITNDKGRLSK+EIEKMVQEAEKYKAEDEE KKKV+AKNALENYAYNMRNT+KD+KI SKL   DKKKIEDA+D AI WLDSNQLAE +EF
Sbjct:  496 TTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEVKKKVDAKNALENYAYNMRNTIKDDKIASKLPAEDKKKIEDAVDGAISWLDSNQLAEVEEF 594

[Close]

BLAST of EY692458 vs. ExPASy Swiss-Prot
Match: HSP70_BRUMA (Heat shock 70 kDa protein OS=Brugia malayi GN=HSP70 PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.086e-37
Identity = 64/99 (64.65%), Postives = 83/99 (83.84%), Query Frame = 2

Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEF 298
            +TG++NKITITNDKGRLSKDEIE+MVQEAEKYKA+DE  K ++ AKNALE+YA+NM+ T++DEK+  K+   DKKKI++  D+ ++WLD NQ AE DEF
Sbjct:  493 STGKQNKITITNDKGRLSKDEIERMVQEAEKYKADDEAQKDRIAAKNALESYAFNMKQTIEDEKLKDKISEEDKKKIQEKCDETVRWLDGNQTAEKDEF 591

HSP 2 Score: 36.1946 bits (82), Expect = 2.086e-37
Identity = 14/21 (66.67%), Postives = 18/21 (85.71%), Query Frame = 3

Query:  297 FEDKMKELESICHPIIAKMYQ 359
            FE + KELES+C+PII K+YQ
Sbjct:  591 FEHRQKELESVCNPIITKLYQ 611

[Close]

BLAST of EY692458 vs. ExPASy Swiss-Prot
Match: HSP7A_CAEEL (Heat shock 70 kDa protein A OS=Caenorhabditis elegans GN=hsp-1 PE=1 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 2.433e-35
Identity = 64/104 (61.54%), Postives = 85/104 (81.73%), Query Frame = 2

Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEF*RQDE 313
            +TG++NKITITNDKGRLSKD+IE+MV EAEKYKA+DE  K ++ AKN LE+YA+N++ T++DEK+  K+ P DKKKIED  D+ ++WLDSNQ AE +EF  Q +
Sbjct:  495 STGKQNKITITNDKGRLSKDDIERMVNEAEKYKADDEAQKDRIGAKNGLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQK 598

HSP 2 Score: 29.6462 bits (65), Expect = 2.433e-35
Identity = 11/21 (52.38%), Postives = 17/21 (80.95%), Query Frame = 3

Query:  297 FEDKMKELESICHPIIAKMYQ 359
            FE + K+LE + +PII+K+YQ
Sbjct:  593 FEHQQKDLEGLANPIISKLYQ 613

[Close]

BLAST of EY692458 vs. ExPASy Swiss-Prot
Match: HSP70_ACHKL (Heat shock 70 kDa protein OS=Achlya klebsiana GN=HSP70 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 4.127e-35
Identity = 64/99 (64.65%), Postives = 82/99 (82.83%), Query Frame = 2

Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEF 298
            +TG++NKITITNDKGRL+KD+IE+MVQEAEKYK+EDE +  ++EAKN LENYAYN+RNT+ DEK+  K+D +DKK I+D +   I WLD NQ AE +EF
Sbjct:  497 STGKENKITITNDKGRLTKDDIERMVQEAEKYKSEDEANNVRIEAKNGLENYAYNLRNTLNDEKLQGKIDESDKKVIDDKVTDIINWLDHNQSAEKEEF 595

HSP 2 Score: 30.0314 bits (66), Expect = 4.127e-35
Identity = 13/20 (65.00%), Postives = 15/20 (75.00%), Query Frame = 3

Query:  297 FEDKMKELESICHPIIAKMY 356
            FE K KELE I +PI+ KMY
Sbjct:  595 FEAKQKELEGIANPIMQKMY 614

[Close]

BLAST of EY692458 vs. ExPASy Swiss-Prot
Match: HS71B_BOVIN (Heat shock 70 kDa protein 1B OS=Bos taurus GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 4.128e-35
Identity = 64/99 (64.65%), Postives = 81/99 (81.82%), Query Frame = 2

Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEF 298
            +TG+ NKITITNDKGRLSK+EIE+MVQEAEKYKAEDE  +++V AKNALE+YA+NM++ V+DE +  K+  ADKKK+ D   + I WLD+N LAE DEF
Sbjct:  494 STGKANKITITNDKGRLSKEEIERMVQEAEKYKAEDEVQRERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEF 592

HSP 2 Score: 34.6538 bits (78), Expect = 4.128e-35
Identity = 13/21 (61.90%), Postives = 18/21 (85.71%), Query Frame = 3

Query:  297 FEDKMKELESICHPIIAKMYQ 359
            FE K KELE +C+PII+++YQ
Sbjct:  592 FEHKRKELEQVCNPIISRLYQ 612

[Close]

BLAST of EY692458 vs. ExPASy Swiss-Prot
Match: HS71B_BOSMU (Heat shock 70 kDa protein 1B OS=Bos mutus grunniens GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 4.128e-35
Identity = 64/99 (64.65%), Postives = 81/99 (81.82%), Query Frame = 2

Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEF 298
            +TG+ NKITITNDKGRLSK+EIE+MVQEAEKYKAEDE  +++V AKNALE+YA+NM++ V+DE +  K+  ADKKK+ D   + I WLD+N LAE DEF
Sbjct:  494 STGKANKITITNDKGRLSKEEIERMVQEAEKYKAEDEVQRERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEF 592

HSP 2 Score: 34.6538 bits (78), Expect = 4.128e-35
Identity = 13/21 (61.90%), Postives = 18/21 (85.71%), Query Frame = 3

Query:  297 FEDKMKELESICHPIIAKMYQ 359
            FE K KELE +C+PII+++YQ
Sbjct:  592 FEHKRKELEQVCNPIISRLYQ 612

[Close]

BLAST of EY692458 vs. ExPASy Swiss-Prot
Match: HS71A_BOVIN (Heat shock 70 kDa protein 1A OS=Bos taurus GN=HSPA1A PE=2 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 4.128e-35
Identity = 64/99 (64.65%), Postives = 81/99 (81.82%), Query Frame = 2

Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEF 298
            +TG+ NKITITNDKGRLSK+EIE+MVQEAEKYKAEDE  +++V AKNALE+YA+NM++ V+DE +  K+  ADKKK+ D   + I WLD+N LAE DEF
Sbjct:  494 STGKANKITITNDKGRLSKEEIERMVQEAEKYKAEDEVQRERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEF 592

HSP 2 Score: 34.6538 bits (78), Expect = 4.128e-35
Identity = 13/21 (61.90%), Postives = 18/21 (85.71%), Query Frame = 3

Query:  297 FEDKMKELESICHPIIAKMYQ 359
            FE K KELE +C+PII+++YQ
Sbjct:  592 FEHKRKELEQVCNPIISRLYQ 612

[Close]

BLAST of EY692458 vs. ExPASy Swiss-Prot
Match: HSP7C_BOVIN (Heat shock cognate 71 kDa protein OS=Bos taurus GN=HSPA8 PE=1 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 1.188e-34
Identity = 63/104 (60.58%), Postives = 85/104 (81.73%), Query Frame = 2

Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEF*RQDE 313
            +TG++NKITITNDKGRLSK++IE+MVQEAEKYKAEDE+ + KV +KN+LE+YA+NM+ TV+DEK+  K++  DK+KI D  ++ I WLD NQ AE +EF  Q +
Sbjct:  494 STGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQK 597

HSP 2 Score: 34.2686 bits (77), Expect = 1.188e-34
Identity = 13/21 (61.90%), Postives = 17/21 (80.95%), Query Frame = 3

Query:  297 FEDKMKELESICHPIIAKMYQ 359
            FE + KELE +C+PII K+YQ
Sbjct:  592 FEHQQKELEKVCNPIITKLYQ 612

[Close]

BLAST of EY692458 vs. ExPASy Swiss-Prot
Match: HSP7C_SAGOE (Heat shock cognate 71 kDa protein OS=Saguinus oedipus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.188e-34
Identity = 63/104 (60.58%), Postives = 85/104 (81.73%), Query Frame = 2

Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEF*RQDE 313
            +TG++NKITITNDKGRLSK++IE+MVQEAEKYKAEDE+ + KV +KN+LE+YA+NM+ TV+DEK+  K++  DK+KI D  ++ I WLD NQ AE +EF  Q +
Sbjct:  494 STGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQK 597

HSP 2 Score: 34.2686 bits (77), Expect = 1.188e-34
Identity = 13/21 (61.90%), Postives = 17/21 (80.95%), Query Frame = 3

Query:  297 FEDKMKELESICHPIIAKMYQ 359
            FE + KELE +C+PII K+YQ
Sbjct:  592 FEHQQKELEKVCNPIITKLYQ 612

[Close]

BLAST of EY692458 vs. ExPASy Swiss-Prot
Match: HSP7C_RAT (Heat shock cognate 71 kDa protein OS=Rattus norvegicus GN=Hspa8 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.188e-34
Identity = 63/104 (60.58%), Postives = 85/104 (81.73%), Query Frame = 2

Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEF*RQDE 313
            +TG++NKITITNDKGRLSK++IE+MVQEAEKYKAEDE+ + KV +KN+LE+YA+NM+ TV+DEK+  K++  DK+KI D  ++ I WLD NQ AE +EF  Q +
Sbjct:  494 STGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQK 597

HSP 2 Score: 34.2686 bits (77), Expect = 1.188e-34
Identity = 13/21 (61.90%), Postives = 17/21 (80.95%), Query Frame = 3

Query:  297 FEDKMKELESICHPIIAKMYQ 359
            FE + KELE +C+PII K+YQ
Sbjct:  592 FEHQQKELEKVCNPIITKLYQ 612

The following BLAST results are available for this feature:

BLAST of EY692458 vs. ExPASy Swiss-Prot

BLAST of EY692458 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189


Match Name	E-value	Identity	Description
HSP70_MAIZE	2.089e-42	85.86	Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=...	[more]
HSP70_BRUMA	2.086e-37	64.65	Heat shock 70 kDa protein OS=Brugia malayi GN=HSP7...	[more]
HSP7A_CAEEL	2.433e-35	61.54	Heat shock 70 kDa protein A OS=Caenorhabditis eleg...	[more]
HSP70_ACHKL	4.127e-35	64.65	Heat shock 70 kDa protein OS=Achlya klebsiana GN=H...	[more]
HS71B_BOVIN	4.128e-35	64.65	Heat shock 70 kDa protein 1B OS=Bos taurus GN=HSPA...	[more]
HS71B_BOSMU	4.128e-35	64.65	Heat shock 70 kDa protein 1B OS=Bos mutus grunnien...	[more]
HS71A_BOVIN	4.128e-35	64.65	Heat shock 70 kDa protein 1A OS=Bos taurus GN=HSPA...	[more]
HSP7C_BOVIN	1.188e-34	60.58	Heat shock cognate 71 kDa protein OS=Bos taurus GN...	[more]
HSP7C_SAGOE	1.188e-34	60.58	Heat shock cognate 71 kDa protein OS=Saguinus oedi...	[more]
HSP7C_RAT	1.188e-34	60.58	Heat shock cognate 71 kDa protein OS=Rattus norveg...	[more]

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Properties


Property Name	Value
Genbank description	CS00-C2-003-071-H03-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY692458 ID=EY692458; Name=EY692458; organism=Citrus sinensis; type=EST; length=749bp
GACAACGGGCCAAAAGAACAAGATCACAATCACCAACGATAAGGGTAGAT
TGTCAAAGGATGAAATTGAGAAGATGGTTCAAGAGGCCGAGAAGTACAAG
GCTGAAGACGAGGAGCACAAGAAGAAGGTCGAGGCCAAGAATGCCTTGGA
AAACTATGCCTACAATATGAGGAACACTGTCAAGGACGAGAAGATCGGCT
CCAAACTTGATCCAGCTGACAAGAAGAAGATTGAGGATGCCATTGATCAG
GCAATTCAATGGCTTGATAGCAACCAGCTGGCTGAGGCCGATGAATTTTG
AAGACAAGATGAAAGAGCTTGAGAGCATCTGCCATCCCATCATTGCCAAG
ATGTATCAAGGTGCTGGTGGTGATATGGGCGGTGGGCATGGATGATGATG
CTCCTCCAGCGGGTGGCAGTGCCCCCGGTCCCAAGAATTTGGAAGGAAAG
TTGAATAAACCTTCCAGTTTTTTTTTTGTGGGGTTTGGGGGAAGGCGGTT
TTTTGGAAGGGGGGGAAAACTGGGACGTTTGGGTTTTTACCTTATGTTTG
TTTTAACCCTTAAGGAAGAAAAATAAAATTTTTTCTTTTTTCTTTTTTTT
TTTTTTTCAAAATTTTTTCTTTTTTAATTTTCCGAAACCAATTTTAAAAT
TAAAAAGAAAAATTTTTTTTGCGGGTCCCCCAGAAAAAAATAAAAAAACA
AAGAAGAAAAACAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAATAAAAA