EY692458 | Citrus Genome Database

Overview


Name	EY692458
Unique Name	EY692458
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	749

Libraries


Library Name	Type
Sweet orange bark, greenhouse plant	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

BLAST of EY692458 vs. ExPASy Swiss-Prot
Match: HSP7C_PONAB (Heat shock cognate 71 kDa protein OS=Pongo abelii GN=HSPA8 PE=2 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 1.188e-34
Identity = 63/104 (60.58%), Postives = 85/104 (81.73%), Query Frame = 2

Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEF*RQDE 313
            +TG++NKITITNDKGRLSK++IE+MVQEAEKYKAEDE+ + KV +KN+LE+YA+NM+ TV+DEK+  K++  DK+KI D  ++ I WLD NQ AE +EF  Q +
Sbjct:  494 STGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQK 597

HSP 2 Score: 34.2686 bits (77), Expect = 1.188e-34
Identity = 13/21 (61.90%), Postives = 17/21 (80.95%), Query Frame = 3

Query:  297 FEDKMKELESICHPIIAKMYQ 359
            FE + KELE +C+PII K+YQ
Sbjct:  592 FEHQQKELEKVCNPIITKLYQ 612

BLAST of EY692458 vs. ExPASy Swiss-Prot
Match: HSP7C_MOUSE (Heat shock cognate 71 kDa protein OS=Mus musculus GN=Hspa8 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.188e-34
Identity = 63/104 (60.58%), Postives = 85/104 (81.73%), Query Frame = 2

Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEF*RQDE 313
            +TG++NKITITNDKGRLSK++IE+MVQEAEKYKAEDE+ + KV +KN+LE+YA+NM+ TV+DEK+  K++  DK+KI D  ++ I WLD NQ AE +EF  Q +
Sbjct:  494 STGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQK 597

HSP 2 Score: 34.2686 bits (77), Expect = 1.188e-34
Identity = 13/21 (61.90%), Postives = 17/21 (80.95%), Query Frame = 3

Query:  297 FEDKMKELESICHPIIAKMYQ 359
            FE + KELE +C+PII K+YQ
Sbjct:  592 FEHQQKELEKVCNPIITKLYQ 612

BLAST of EY692458 vs. ExPASy Swiss-Prot
Match: HSP7C_HUMAN (Heat shock cognate 71 kDa protein OS=Homo sapiens GN=HSPA8 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.188e-34
Identity = 63/104 (60.58%), Postives = 85/104 (81.73%), Query Frame = 2

Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEF*RQDE 313
            +TG++NKITITNDKGRLSK++IE+MVQEAEKYKAEDE+ + KV +KN+LE+YA+NM+ TV+DEK+  K++  DK+KI D  ++ I WLD NQ AE +EF  Q +
Sbjct:  494 STGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQK 597

HSP 2 Score: 34.2686 bits (77), Expect = 1.188e-34
Identity = 13/21 (61.90%), Postives = 17/21 (80.95%), Query Frame = 3

Query:  297 FEDKMKELESICHPIIAKMYQ 359
            FE + KELE +C+PII K+YQ
Sbjct:  592 FEHQQKELEKVCNPIITKLYQ 612

BLAST of EY692458 vs. ExPASy Swiss-Prot
Match: HSP7C_HORSE (Heat shock cognate 71 kDa protein OS=Equus caballus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.188e-34
Identity = 63/104 (60.58%), Postives = 85/104 (81.73%), Query Frame = 2

Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEF*RQDE 313
            +TG++NKITITNDKGRLSK++IE+MVQEAEKYKAEDE+ + KV +KN+LE+YA+NM+ TV+DEK+  K++  DK+KI D  ++ I WLD NQ AE +EF  Q +
Sbjct:  494 STGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQK 597

HSP 2 Score: 34.2686 bits (77), Expect = 1.188e-34
Identity = 13/21 (61.90%), Postives = 17/21 (80.95%), Query Frame = 3

Query:  297 FEDKMKELESICHPIIAKMYQ 359
            FE + KELE +C+PII K+YQ
Sbjct:  592 FEHQQKELEKVCNPIITKLYQ 612

BLAST of EY692458 vs. ExPASy Swiss-Prot
Match: HSP7C_CRIGR (Heat shock cognate 71 kDa protein OS=Cricetulus griseus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.188e-34
Identity = 63/104 (60.58%), Postives = 85/104 (81.73%), Query Frame = 2

Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEF*RQDE 313
            +TG++NKITITNDKGRLSK++IE+MVQEAEKYKAEDE+ + KV +KN+LE+YA+NM+ TV+DEK+  K++  DK+KI D  ++ I WLD NQ AE +EF  Q +
Sbjct:  494 STGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQK 597

HSP 2 Score: 34.2686 bits (77), Expect = 1.188e-34
Identity = 13/21 (61.90%), Postives = 17/21 (80.95%), Query Frame = 3

Query:  297 FEDKMKELESICHPIIAKMYQ 359
            FE + KELE +C+PII K+YQ
Sbjct:  592 FEHQQKELEKVCNPIITKLYQ 612

BLAST of EY692458 vs. ExPASy Swiss-Prot
Match: HSP71_PONAB (Heat shock 70 kDa protein 1 OS=Pongo abelii GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.188e-34
Identity = 64/99 (64.65%), Postives = 81/99 (81.82%), Query Frame = 2

Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEF 298
            +TG+ NKITITNDKGRLSK+EIE+MVQEAEKYKAEDE  +++V AKNALE+YA+NM++ V+DE +  K+  ADKKK+ D   + I WLD+N LAE DEF
Sbjct:  494 STGKANKITITNDKGRLSKEEIERMVQEAEKYKAEDEVQRERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEF 592

HSP 2 Score: 33.113 bits (74), Expect = 1.188e-34
Identity = 13/21 (61.90%), Postives = 17/21 (80.95%), Query Frame = 3

Query:  297 FEDKMKELESICHPIIAKMYQ 359
            FE K KELE +C+PII+ +YQ
Sbjct:  592 FEHKRKELEQVCNPIISGLYQ 612

BLAST of EY692458 vs. ExPASy Swiss-Prot
Match: HSP71_HUMAN (Heat shock 70 kDa protein 1A/1B OS=Homo sapiens GN=HSPA1A PE=1 SV=5)

HSP 1 Score: 135.576 bits (340), Expect = 1.188e-34
Identity = 64/99 (64.65%), Postives = 81/99 (81.82%), Query Frame = 2

Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEF 298
            +TG+ NKITITNDKGRLSK+EIE+MVQEAEKYKAEDE  +++V AKNALE+YA+NM++ V+DE +  K+  ADKKK+ D   + I WLD+N LAE DEF
Sbjct:  494 STGKANKITITNDKGRLSKEEIERMVQEAEKYKAEDEVQRERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEF 592

HSP 2 Score: 33.113 bits (74), Expect = 1.188e-34
Identity = 13/21 (61.90%), Postives = 17/21 (80.95%), Query Frame = 3

Query:  297 FEDKMKELESICHPIIAKMYQ 359
            FE K KELE +C+PII+ +YQ
Sbjct:  592 FEHKRKELEQVCNPIISGLYQ 612

BLAST of EY692458 vs. ExPASy Swiss-Prot
Match: HS71B_PIG (Heat shock 70 kDa protein 1B OS=Sus scrofa GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.547e-34
Identity = 64/99 (64.65%), Postives = 81/99 (81.82%), Query Frame = 2

Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEF 298
            +TG+ NKITITNDKGRLSK+EIE+MVQEAEKYKAEDE  +++V AKNALE+YA+NM++ V+DE +  K+  ADKKK+ D   + I WLD+N LAE DEF
Sbjct:  494 STGKANKITITNDKGRLSKEEIERMVQEAEKYKAEDEIQRERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEF 592

HSP 2 Score: 33.113 bits (74), Expect = 1.547e-34
Identity = 13/21 (61.90%), Postives = 17/21 (80.95%), Query Frame = 3

Query:  297 FEDKMKELESICHPIIAKMYQ 359
            FE K KELE +C+PII+ +YQ
Sbjct:  592 FEHKRKELEQVCNPIISGLYQ 612

BLAST of EY692458 vs. ExPASy Swiss-Prot
Match: HSP7C_DANRE (Heat shock cognate 71 kDa protein OS=Danio rerio GN=hspa8 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 2.625e-34
Identity = 63/104 (60.58%), Postives = 83/104 (79.81%), Query Frame = 2

Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEF*RQDE 313
            +TG++NKITITNDKGRLSK++IE+MVQEAEKYKAED+  + KV AKN LE+YA+NM++TV+DEK+  K+   DK+KI D  ++ I WLD NQ AE +EF  Q +
Sbjct:  494 STGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDDVQRDKVSAKNGLESYAFNMKSTVEDEKLKGKISDEDKQKILDKCNEVIGWLDKNQTAEREEFEHQQK 597

HSP 2 Score: 34.2686 bits (77), Expect = 2.625e-34
Identity = 13/21 (61.90%), Postives = 17/21 (80.95%), Query Frame = 3

Query:  297 FEDKMKELESICHPIIAKMYQ 359
            FE + KELE +C+PII K+YQ
Sbjct:  592 FEHQQKELEKVCNPIITKLYQ 612

BLAST of EY692458 vs. ExPASy Swiss-Prot
Match: HSP71_CANFA (Heat shock 70 kDa protein 1 OS=Canis familiaris GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 2.625e-34
Identity = 64/99 (64.65%), Postives = 80/99 (80.81%), Query Frame = 2

Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEF 298
            +TG+ NKITITNDKGRLSK+EIE+MVQEAEKYKAEDE  + +V AKNALE+YA+NM++ V+DE +  K+  ADKKK+ D   + I WLD+N LAE DEF
Sbjct:  494 STGKANKITITNDKGRLSKEEIERMVQEAEKYKAEDEVQRDRVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEF 592

HSP 2 Score: 32.7278 bits (73), Expect = 2.625e-34
Identity = 13/21 (61.90%), Postives = 16/21 (76.19%), Query Frame = 3

Query:  297 FEDKMKELESICHPIIAKMYQ 359
            FE K KELE +C+PII  +YQ
Sbjct:  592 FEHKRKELEQVCNPIITGLYQ 612

The following BLAST results are available for this feature:

BLAST of EY692458 vs. ExPASy Swiss-Prot

BLAST of EY692458 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189


Match Name	E-value	Identity	Description
HSP7C_PONAB	1.188e-34	60.58	Heat shock cognate 71 kDa protein OS=Pongo abelii ...	[more]
HSP7C_MOUSE	1.188e-34	60.58	Heat shock cognate 71 kDa protein OS=Mus musculus ...	[more]
HSP7C_HUMAN	1.188e-34	60.58	Heat shock cognate 71 kDa protein OS=Homo sapiens ...	[more]
HSP7C_HORSE	1.188e-34	60.58	Heat shock cognate 71 kDa protein OS=Equus caballu...	[more]
HSP7C_CRIGR	1.188e-34	60.58	Heat shock cognate 71 kDa protein OS=Cricetulus gr...	[more]
HSP71_PONAB	1.188e-34	64.65	Heat shock 70 kDa protein 1 OS=Pongo abelii GN=HSP...	[more]
HSP71_HUMAN	1.188e-34	64.65	Heat shock 70 kDa protein 1A/1B OS=Homo sapiens GN...	[more]
HS71B_PIG	1.547e-34	64.65	Heat shock 70 kDa protein 1B OS=Sus scrofa GN=HSPA...	[more]
HSP7C_DANRE	2.625e-34	60.58	Heat shock cognate 71 kDa protein OS=Danio rerio G...	[more]
HSP71_CANFA	2.625e-34	64.65	Heat shock 70 kDa protein 1 OS=Canis familiaris GN...	[more]

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Properties


Property Name	Value
Genbank description	CS00-C2-003-071-H03-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY692458 ID=EY692458; Name=EY692458; organism=Citrus sinensis; type=EST; length=749bp
GACAACGGGCCAAAAGAACAAGATCACAATCACCAACGATAAGGGTAGAT
TGTCAAAGGATGAAATTGAGAAGATGGTTCAAGAGGCCGAGAAGTACAAG
GCTGAAGACGAGGAGCACAAGAAGAAGGTCGAGGCCAAGAATGCCTTGGA
AAACTATGCCTACAATATGAGGAACACTGTCAAGGACGAGAAGATCGGCT
CCAAACTTGATCCAGCTGACAAGAAGAAGATTGAGGATGCCATTGATCAG
GCAATTCAATGGCTTGATAGCAACCAGCTGGCTGAGGCCGATGAATTTTG
AAGACAAGATGAAAGAGCTTGAGAGCATCTGCCATCCCATCATTGCCAAG
ATGTATCAAGGTGCTGGTGGTGATATGGGCGGTGGGCATGGATGATGATG
CTCCTCCAGCGGGTGGCAGTGCCCCCGGTCCCAAGAATTTGGAAGGAAAG
TTGAATAAACCTTCCAGTTTTTTTTTTGTGGGGTTTGGGGGAAGGCGGTT
TTTTGGAAGGGGGGGAAAACTGGGACGTTTGGGTTTTTACCTTATGTTTG
TTTTAACCCTTAAGGAAGAAAAATAAAATTTTTTCTTTTTTCTTTTTTTT
TTTTTTTCAAAATTTTTTCTTTTTTAATTTTCCGAAACCAATTTTAAAAT
TAAAAAGAAAAATTTTTTTTGCGGGTCCCCCAGAAAAAAATAAAAAAACA
AAGAAGAAAAACAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAATAAAAA