EY692453

Overview
NameEY692453
Unique NameEY692453
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1007
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692453 vs. ExPASy Swiss-Prot
Match: UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.116e-13
Identity = 40/117 (34.19%), Postives = 65/117 (55.56%), Query Frame = 1
Query:  190 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTP--NGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPN 534
            A KRIL+E+K++Q +P     + P+ E++F WQ  I GP D+ + GG++   I  P +YPFKPP     T   +    +   ICL I     E W P+ ++   L+++ + + T+PN
Sbjct:    2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK---EQWSPALTISKVLLSICSLL-TDPN 114          
BLAST of EY692453 vs. ExPASy Swiss-Prot
Match: UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.458e-13
Identity = 39/117 (33.33%), Postives = 65/117 (55.56%), Query Frame = 1
Query:  190 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTP--NGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPN 534
            A KRIL+E+K++Q +P     + P+ E++F WQ  I GP ++ + GG++   I  P +YPFKPP     T   +    +   ICL I     E W P+ ++   L+++ + + T+PN
Sbjct:    2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK---EQWSPALTISKVLLSICSLL-TDPN 114          
BLAST of EY692453 vs. ExPASy Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.904e-13
Identity = 39/117 (33.33%), Postives = 65/117 (55.56%), Query Frame = 1
Query:  190 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTP--NGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPN 534
            A KRIL+E+K++Q +P     + P+ E++F WQ  I GP ++ + GG++   I  P +YPFKPP     T   +    +   ICL I     E W P+ ++   L+++ + + T+PN
Sbjct:    2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK---EQWSPALTISKVLLSICSLL-TDPN 114          
BLAST of EY692453 vs. ExPASy Swiss-Prot
Match: UBC29_ARATH (Ubiquitin carrier protein E2 29 OS=Arabidopsis thaliana GN=UBC29 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 4.242e-13
Identity = 38/117 (32.48%), Postives = 65/117 (55.56%), Query Frame = 1
Query:  190 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTP--NGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPN 534
            A +RIL+E+KE+Q +P     + P  E++F WQ  I GP ++ + GG++   I  P +YPFKPP  +  T   +    +   ICL I     + W P+ ++   L+++ + + T+PN
Sbjct:    2 ATRRILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFKPPKVVFRTKVFHPNINSNGNICLDILK---DQWSPALTISKVLLSICSLL-TDPN 114          
BLAST of EY692453 vs. ExPASy Swiss-Prot
Match: UBC_ASFB7 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (strain Badajoz 1971 Vero-adapted) GN=UBC PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 7.236e-13
Identity = 49/182 (26.92%), Postives = 84/182 (46.15%), Query Frame = 1
Query:  202 ILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFML--------LTPNGRFETQTKICLSI-----SNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEERRALAIKSREAAPKFGTPERQKLIDEIH----EYM---LSKAPPVP 687
            ++ E + +  NPS++F     E NI EW   +RGP DT +EGG++  ++  P EYP+ PP            + P+GR      +C+SI     +      W P+  + T L+++I+ +      +  ++D  K  R+ +  +  E+ P       +K +DE      EY     S  PP+P
Sbjct:    6 LIAEYRHLIENPSENFKISVNENNITEWDVILRGPPDTLYEGGLFKAKVAFPPEYPYAPPKLTFTSEMWHPNIYPDGR------LCISILHGDNAEEQGMTWSPAQKIDTILLSVISLLNEPNPDSPANVDAAKSYRKYVYKEDLESYPMEVKKTVKKSLDECSPEDIEYFKNAASNVPPIP 181          
BLAST of EY692453 vs. ExPASy Swiss-Prot
Match: UBC_ASFP4 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Tick/South Africa/Pretoriuskop Pr4/1996) GN=UBC PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.612e-12
Identity = 45/176 (25.57%), Postives = 82/176 (46.59%), Query Frame = 1
Query:  202 ILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTP--NGRFETQTKICLSI-----SNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEERRALAIKSREAAPKFGTPERQKLIDEIH----EYM---LSKAPPVP 687
            ++ E + +  NPS++F     E N+ EW   ++GP DT +EGG++  +I  P  YP++PP     +   +    +  ++C+SI     +      W P   + T L+++I+ +      +  ++D  K  RR +  +  E+ P       +K +DE      EY     S  PP+P
Sbjct:    6 LMAEYRHLTENPSENFKVSVNENNMTEWDVILKGPADTLYEGGLFKAKIGFPPNYPYEPPRLTFTSEMWHPNIYSDGRVCISILHGDNAEEQGMTWSPVQKIDTILLSVISLLNEPNTDSPANVDAAKSYRRFVHKEDLESYPMEVKRTVKKSLDECSPEDIEYFKNAASNVPPIP 181          
BLAST of EY692453 vs. ExPASy Swiss-Prot
Match: UBC30_ARATH (Ubiquitin carrier protein E2 30 OS=Arabidopsis thaliana GN=UBC30 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.105e-12
Identity = 39/117 (33.33%), Postives = 65/117 (55.56%), Query Frame = 1
Query:  190 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPP--SFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPN 534
            A KRI +E++++Q +P     + P  +++F+WQ  I GP D+ F GG++   I  P +YPFKPP  +F     +    +   ICL I     E W P+ +V   L+++ + + T+PN
Sbjct:    2 ASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINSNGSICLDILK---EQWSPALTVSKVLLSICSLL-TDPN 114          
BLAST of EY692453 vs. ExPASy Swiss-Prot
Match: UBC1_COLGL (Ubiquitin-conjugating enzyme E2-16 kDa OS=Colletotrichum gloeosporioides GN=UBC1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.105e-12
Identity = 41/119 (34.45%), Postives = 63/119 (52.94%), Query Frame = 1
Query:  190 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPN 534
            A KRI +E+ ++  +P     + P+ E++F WQ  I GPGD+ + GG++   I  P +YPFKPP     T    PN    +   ICL I     + W P+ ++   L++ I  M T+PN
Sbjct:    2 AFKRINKELTDLGRDPPSSCSAGPVGEDLFHWQATIMGPGDSPYSGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPN--INSNGSICLDILR---DQWSPALTISKVLLS-ICSMLTDPN 114          
BLAST of EY692453 vs. ExPASy Swiss-Prot
Match: UB2R1_MOUSE (Ubiquitin-conjugating enzyme E2 R1 OS=Mus musculus GN=Cdc34 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.105e-12
Identity = 46/130 (35.38%), Postives = 74/130 (56.92%), Query Frame = 1
Query:  196 KRILQEVKEMQSNPSDDF-MSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT----PNGRFETQTKICLSISNHHP------------EHWQPSWSVRTALVALIAFMPTNPN 534
            K +L E+K +Q  P + F ++L  E +++ W+ AI GP +T +EGG +  R++ P +YP+ PP+F  LT    PN  +ET   +C+SI   HP            E W P+ +VRT L+++I+ +   PN
Sbjct:   11 KALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPN-IYET-GDVCISIL--HPPVDDPQSGELPSERWNPTQNVRTILLSVISLL-NEPN 135          
BLAST of EY692453 vs. ExPASy Swiss-Prot
Match: UB2R1_HUMAN (Ubiquitin-conjugating enzyme E2 R1 OS=Homo sapiens GN=CDC34 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 2.105e-12
Identity = 46/130 (35.38%), Postives = 74/130 (56.92%), Query Frame = 1
Query:  196 KRILQEVKEMQSNPSDDF-MSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT----PNGRFETQTKICLSISNHHP------------EHWQPSWSVRTALVALIAFMPTNPN 534
            K +L E+K +Q  P + F ++L  E +++ W+ AI GP +T +EGG +  R++ P +YP+ PP+F  LT    PN  +ET   +C+SI   HP            E W P+ +VRT L+++I+ +   PN
Sbjct:   11 KALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPN-IYET-GDVCISIL--HPPVDDPQSGELPSERWNPTQNVRTILLSVISLL-NEPN 135          
The following BLAST results are available for this feature:
BLAST of EY692453 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
UBC4_SOLLC1.116e-1334.19Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum ... [more]
UBC8_ARATH1.458e-1333.33Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis t... [more]
UBC10_ARATH1.904e-1333.33Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis ... [more]
UBC29_ARATH4.242e-1332.48Ubiquitin carrier protein E2 29 OS=Arabidopsis tha... [more]
UBC_ASFB77.236e-1326.92Ubiquitin-conjugating enzyme E2 OS=African swine f... [more]
UBC_ASFP41.612e-1225.57Ubiquitin-conjugating enzyme E2 OS=African swine f... [more]
UBC30_ARATH2.105e-1233.33Ubiquitin carrier protein E2 30 OS=Arabidopsis tha... [more]
UBC1_COLGL2.105e-1234.45Ubiquitin-conjugating enzyme E2-16 kDa OS=Colletot... [more]
UB2R1_MOUSE2.105e-1235.38Ubiquitin-conjugating enzyme E2 R1 OS=Mus musculus... [more]
UB2R1_HUMAN2.105e-1235.38Ubiquitin-conjugating enzyme E2 R1 OS=Homo sapiens... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-071-G08-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692453 ID=EY692453; Name=EY692453; organism=Citrus sinensis; type=EST; length=1007bp
TCGGGGTCCGGGTCGGTATTCCCGGGTCGACCACGCGTCCGCGGACGCGT
GGGCTTTGCAATCGGCTTTCCTACAAAGACTTTTGTCTGCTCGTTCGCAT
ACAAAGTCCTGATAGGACGGTGGACGTGAACCGATCGAAATCAGATCTGA
AATCCAATGGCGGAAGACAGGTACAATTTGAAAAATCCTGCGGTGAAGAG
AATCCTACAGGAGGTCAAAGAGATGCAATCAAATCCGTCAGATGATTTCA
TGAGCCTCCCTCTCGAGGAGAATATATTTGAATGGCAATTTGCGATCAGG
GGACCGGGTGATACTGAATTTGAAGGTGGGATTTATCATGGTCGGATTCA
GTTGCCTGCGGAATACCCATTCAAGCCTCCTTCATTTATGCTCTTAACAC
CAAATGGGCGTTTTGAAACTCAGACCAAAATATGCTTAAGCATTTCGAAT
CATCATCCGGAGCACTGGCAACCATCTTGGAGTGTGAGGACTGCTCTTGT
AGCACTAATTGCTTTCATGCCCACCAATCCAAATGGTGCTTTGGGCTCAC
TAGATTATAAGAAGGAAGAGAGGCGTGCTCTGGCCATCAAATCTCGTGAA
GCTGCCCCCAAATTTGGGACTCCTGAACGTCAAAAACTCATTGATGAGAT
CCATGAATATATGTTAAGCAAGGCACCCCCTGTCCCTCAGCTCCACACCT
GGTGAAGAACAGCCTGGCAACAGGGAGGGTGAAACACAGGCAAAGTTCCC
TAGACGCCTTGGTTGCGGGGGCTGGGGGAAGGGGTCCCCACCCCCGTAGG
GGAAAGGATTTTTTGGAAAAAATTTCAGGAGAGGTTCCCGGCCCACCGTG
AACCCCCCCCCCCGAATGGGGTGGAAATATAAAAAGCAGTTTCTGGCCAC
AACCCCCCCAGGAAGCCCCACCTTCCCACCCAAAACGCCAGAAACCTAGG
GGTTCTAAAAAAGCCCTGGGTAAAAAGAAGATGCGGGTATCTCAAGGGAG
AACGCGG
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