EY692453

Overview
NameEY692453
Unique NameEY692453
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1007
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692453 vs. ExPASy Swiss-Prot
Match: UBC_ASFM2 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Tick/Malawi/Lil 20-1/1983) GN=UBC PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.750e-12
Identity = 42/156 (26.92%), Postives = 77/156 (49.36%), Query Frame = 1
Query:  202 ILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTP--NGRFETQTKICLSI-----SNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEERRALAIKSREAAPKFGTPERQKLIDE 648
            +L E K +  NPS+ F     E+N+ EW   ++GP DT +EGG++  +I  P +YP++PP     +   +    +  K+C+SI     +      W P+  + T L+++I+ +      +  ++D  K  R+ L  +  E+ P       +K +DE
Sbjct:    6 LLAEYKNLIVNPSEHFKISVNEDNLTEWDVILKGPPDTLYEGGLFKAKIVFPPKYPYEPPRLTFTSEMWHPNIYSDGKLCISILHGDNAEEQGMTWSPAQKIDTVLLSVISLLNEPNPDSPANVDAAKSYRKYLYKEDLESYPMEVKKTVKKSLDE 161          
BLAST of EY692453 vs. ExPASy Swiss-Prot
Match: UBC15_SCHPO (Ubiquitin-conjugating enzyme E2 15 OS=Schizosaccharomyces pombe GN=ubc15 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.591e-12
Identity = 45/143 (31.47%), Postives = 71/143 (49.65%), Query Frame = 1
Query:  208 QEVKEMQSNPSDDF-MSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT--------PNGRFETQTKICLSISNHHP------------EHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEER 573
            +++KE+Q NP   F + L  +++IFEW+  I GP DT +EGG +H  +  P +YP  PP     T        PNG      ++C+SI   HP            E W P  S  T L+++I+ + +  + +  ++D  KE R
Sbjct:   12 KQLKEIQKNPPQGFSVGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLSFPQDYPLMPPKMKFTTEIWHPNVHPNG------EVCISIL--HPPGDDKYGYEDAGERWLPVHSPETILISVISMLSSPNDESPANIDAAKEFR 146          
BLAST of EY692453 vs. ExPASy Swiss-Prot
Match: UBC_ASFK5 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Pig/Kenya/KEN-50/1950) GN=UBC PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.125e-12
Identity = 42/162 (25.93%), Postives = 75/162 (46.30%), Query Frame = 1
Query:  202 ILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFML--------LTPNGRFETQTKICLSISN-----HHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEERRALAIKSREAAPKFGTPERQKLIDE 648
            +L E + +  NPS+ F     E N+ EW   ++GP DT +EGG++  +I  P  YP++PP            + P+GR      +C+SI +          W P+  + T L+++I+        +  ++D  K  R+ +  +  E+ P       +K +DE
Sbjct:    6 LLTEYRNLTENPSEHFKVSVNENNLTEWDVILKGPSDTFYEGGLFKAKITFPPNYPYEPPKLTFTSEMWHPNIYPDGR------LCISILHTDNVEERGMTWSPAQKIETVLLSVISLFNEPNTDSPANVDAAKSYRKLMHKEDLESYPMEVKKTVKKSLDE 161          
BLAST of EY692453 vs. ExPASy Swiss-Prot
Match: UB2R2_RABIT (Ubiquitin-conjugating enzyme E2 R2 OS=Oryctolagus cuniculus GN=UBE2R2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.125e-12
Identity = 41/128 (32.03%), Postives = 69/128 (53.91%), Query Frame = 1
Query:  196 KRILQEVKEMQSNPSDDF-MSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTP--NGRFETQTKICLSISNHHP------------EHWQPSWSVRTALVALIAFMPTNPN 534
            K ++ E+K +Q  P + F ++L  E +++ W+ AI GP +T +EGG +   I+ P +YP+ PP+F  LT   +        +C+SI   HP            E W P+ +VRT L+++I+ +   PN
Sbjct:   11 KALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISIL--HPPVDDPQSGELPSERWNPTQNVRTILLSVISLL-NEPN 135          
BLAST of EY692453 vs. ExPASy Swiss-Prot
Match: UB2R2_MOUSE (Ubiquitin-conjugating enzyme E2 R2 OS=Mus musculus GN=Ube2r2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.125e-12
Identity = 41/128 (32.03%), Postives = 69/128 (53.91%), Query Frame = 1
Query:  196 KRILQEVKEMQSNPSDDF-MSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTP--NGRFETQTKICLSISNHHP------------EHWQPSWSVRTALVALIAFMPTNPN 534
            K ++ E+K +Q  P + F ++L  E +++ W+ AI GP +T +EGG +   I+ P +YP+ PP+F  LT   +        +C+SI   HP            E W P+ +VRT L+++I+ +   PN
Sbjct:   11 KALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISIL--HPPVDDPQSGELPSERWNPTQNVRTILLSVISLL-NEPN 135          
BLAST of EY692453 vs. ExPASy Swiss-Prot
Match: UB2R2_HUMAN (Ubiquitin-conjugating enzyme E2 R2 OS=Homo sapiens GN=UBE2R2 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.125e-12
Identity = 41/128 (32.03%), Postives = 69/128 (53.91%), Query Frame = 1
Query:  196 KRILQEVKEMQSNPSDDF-MSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTP--NGRFETQTKICLSISNHHP------------EHWQPSWSVRTALVALIAFMPTNPN 534
            K ++ E+K +Q  P + F ++L  E +++ W+ AI GP +T +EGG +   I+ P +YP+ PP+F  LT   +        +C+SI   HP            E W P+ +VRT L+++I+ +   PN
Sbjct:   11 KALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISIL--HPPVDDPQSGELPSERWNPTQNVRTILLSVISLL-NEPN 135          
BLAST of EY692453 vs. ExPASy Swiss-Prot
Match: UB2D4_HUMAN (Ubiquitin-conjugating enzyme E2 D4 OS=Homo sapiens GN=UBE2D4 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.125e-12
Identity = 37/121 (30.58%), Postives = 64/121 (52.89%), Query Frame = 1
Query:  190 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTP--NGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFM-PTNPNGAL 543
            A+KRI +E+ ++Q +P     + P+ +++F WQ  I GP D+ ++GG++   I  P +YPFKPP     T   +    +   ICL I       W P+ +V   L+++ + +   NP+  L
Sbjct:    2 ALKRIQKELTDLQRDPPAQCSAGPVGDDLFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTKIYHPNINSNGSICLDILR---SQWSPALTVSKVLLSICSLLCDPNPDDPL 119          
BLAST of EY692453 vs. ExPASy Swiss-Prot
Match: UBC1_MAGGR (Ubiquitin-conjugating enzyme E2-16 kDa OS=Magnaporthe grisea GN=UBC1 PE=3 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 8.000e-12
Identity = 40/119 (33.61%), Postives = 63/119 (52.94%), Query Frame = 1
Query:  190 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPN 534
            A+KRI +E+ ++  +P     + P+ E++F WQ  I GP D+ + GG++   I  P +YPFKPP     T    PN    +   ICL I     + W P+ ++   L++ I  M T+PN
Sbjct:    2 ALKRINKELTDLGRDPPSSCSAGPVGEDLFHWQATIMGPSDSPYAGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPN--INSNGSICLDILR---DQWSPALTISKVLLS-ICSMLTDPN 114          
BLAST of EY692453 vs. ExPASy Swiss-Prot
Match: UBC12_ARATH (Probable ubiquitin-conjugating enzyme E2 12 OS=Arabidopsis thaliana GN=UBC12 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 8.000e-12
Identity = 40/118 (33.90%), Postives = 68/118 (57.63%), Query Frame = 1
Query:  190 AVKRILQEVKEMQSNPSDDFMSLPL-EENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPP--SFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPN 534
            A KRI +E+++MQ +P  +  + P+ EE+IF WQ  I GP D+ + GG++   I   ++YPFKPP  +F     +   +++  ICL I     E W P+ +    L+++ + + T+PN
Sbjct:    2 ASKRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDYPFKPPKVNFKTKVYHPNIDSKGSICLDILK---EQWSPAPTTSKVLLSICSLL-TDPN 115          
BLAST of EY692453 vs. ExPASy Swiss-Prot
Match: UB2D1_MOUSE (Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus GN=Ube2d1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.045e-11
Identity = 36/121 (29.75%), Postives = 64/121 (52.89%), Query Frame = 1
Query:  190 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTP--NGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFM-PTNPNGAL 543
            A+KRI +E+ ++Q +P     + P+ +++F WQ  I GP D+ ++GG++   +  P +YPFKPP     T   +    +   ICL I       W P+ +V   L+++ + +   NP+  L
Sbjct:    2 ALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILR---SQWSPALTVSKVLLSICSLLCDPNPDDPL 119          
The following BLAST results are available for this feature:
BLAST of EY692453 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
UBC_ASFM22.750e-1226.92Ubiquitin-conjugating enzyme E2 OS=African swine f... [more]
UBC15_SCHPO3.591e-1231.47Ubiquitin-conjugating enzyme E2 15 OS=Schizosaccha... [more]
UBC_ASFK56.125e-1225.93Ubiquitin-conjugating enzyme E2 OS=African swine f... [more]
UB2R2_RABIT6.125e-1232.03Ubiquitin-conjugating enzyme E2 R2 OS=Oryctolagus ... [more]
UB2R2_MOUSE6.125e-1232.03Ubiquitin-conjugating enzyme E2 R2 OS=Mus musculus... [more]
UB2R2_HUMAN6.125e-1232.03Ubiquitin-conjugating enzyme E2 R2 OS=Homo sapiens... [more]
UB2D4_HUMAN6.125e-1230.58Ubiquitin-conjugating enzyme E2 D4 OS=Homo sapiens... [more]
UBC1_MAGGR8.000e-1233.61Ubiquitin-conjugating enzyme E2-16 kDa OS=Magnapor... [more]
UBC12_ARATH8.000e-1233.90Probable ubiquitin-conjugating enzyme E2 12 OS=Ara... [more]
UB2D1_MOUSE1.045e-1129.75Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-071-G08-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692453 ID=EY692453; Name=EY692453; organism=Citrus sinensis; type=EST; length=1007bp
TCGGGGTCCGGGTCGGTATTCCCGGGTCGACCACGCGTCCGCGGACGCGT
GGGCTTTGCAATCGGCTTTCCTACAAAGACTTTTGTCTGCTCGTTCGCAT
ACAAAGTCCTGATAGGACGGTGGACGTGAACCGATCGAAATCAGATCTGA
AATCCAATGGCGGAAGACAGGTACAATTTGAAAAATCCTGCGGTGAAGAG
AATCCTACAGGAGGTCAAAGAGATGCAATCAAATCCGTCAGATGATTTCA
TGAGCCTCCCTCTCGAGGAGAATATATTTGAATGGCAATTTGCGATCAGG
GGACCGGGTGATACTGAATTTGAAGGTGGGATTTATCATGGTCGGATTCA
GTTGCCTGCGGAATACCCATTCAAGCCTCCTTCATTTATGCTCTTAACAC
CAAATGGGCGTTTTGAAACTCAGACCAAAATATGCTTAAGCATTTCGAAT
CATCATCCGGAGCACTGGCAACCATCTTGGAGTGTGAGGACTGCTCTTGT
AGCACTAATTGCTTTCATGCCCACCAATCCAAATGGTGCTTTGGGCTCAC
TAGATTATAAGAAGGAAGAGAGGCGTGCTCTGGCCATCAAATCTCGTGAA
GCTGCCCCCAAATTTGGGACTCCTGAACGTCAAAAACTCATTGATGAGAT
CCATGAATATATGTTAAGCAAGGCACCCCCTGTCCCTCAGCTCCACACCT
GGTGAAGAACAGCCTGGCAACAGGGAGGGTGAAACACAGGCAAAGTTCCC
TAGACGCCTTGGTTGCGGGGGCTGGGGGAAGGGGTCCCCACCCCCGTAGG
GGAAAGGATTTTTTGGAAAAAATTTCAGGAGAGGTTCCCGGCCCACCGTG
AACCCCCCCCCCCGAATGGGGTGGAAATATAAAAAGCAGTTTCTGGCCAC
AACCCCCCCAGGAAGCCCCACCTTCCCACCCAAAACGCCAGAAACCTAGG
GGTTCTAAAAAAGCCCTGGGTAAAAAGAAGATGCGGGTATCTCAAGGGAG
AACGCGG
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