EY692453

Overview
NameEY692453
Unique NameEY692453
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1007
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY692453 vs. ExPASy Swiss-Prot
Match: UB2D3_BOVIN (Ubiquitin-conjugating enzyme E2 D3 OS=Bos taurus GN=UBE2D3 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.970e-11
Identity = 37/123 (30.08%), Postives = 64/123 (52.03%), Query Frame = 1 
Query:  190 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFM-PTNPNGAL 543
            A+KRI +E+ ++  +P     + P+ +++F WQ  I GP D+ ++GG++   I  P +YPFKPP     T    PN    +   ICL I       W P+ ++   L+++ + +   NP+  L
Sbjct:    2 ALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPN--INSNDSICLDILR---SQWSPALTISKVLLSICSLLCDPNPDDPL 119
[Close]
BLAST of EY692453 vs. ExPASy Swiss-Prot
Match: UB2D3_RAT (Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus GN=Ube2d3 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.185e-11
Identity = 37/123 (30.08%), Postives = 64/123 (52.03%), Query Frame = 1 
Query:  190 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFM-PTNPNGAL 543
            A+KRI +E+ ++  +P     + P+ +++F WQ  I GP D+ ++GG++   I  P +YPFKPP     T    PN    +   ICL I       W P+ ++   L+++ + +   NP+  L
Sbjct:    2 ALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPN--INSNGSICLDILR---SQWSPALTISKVLLSICSLLCDPNPDDPL 119
[Close]
BLAST of EY692453 vs. ExPASy Swiss-Prot
Match: UB2D3_PONAB (Ubiquitin-conjugating enzyme E2 D3 OS=Pongo abelii GN=UBE2D3 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.185e-11
Identity = 37/123 (30.08%), Postives = 64/123 (52.03%), Query Frame = 1 
Query:  190 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFM-PTNPNGAL 543
            A+KRI +E+ ++  +P     + P+ +++F WQ  I GP D+ ++GG++   I  P +YPFKPP     T    PN    +   ICL I       W P+ ++   L+++ + +   NP+  L
Sbjct:    2 ALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPN--INSNGSICLDILR---SQWSPALTISKVLLSICSLLCDPNPDDPL 119
[Close]
BLAST of EY692453 vs. ExPASy Swiss-Prot
Match: UB2D3_MOUSE (Ubiquitin-conjugating enzyme E2 D3 OS=Mus musculus GN=Ube2d3 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.185e-11
Identity = 37/123 (30.08%), Postives = 64/123 (52.03%), Query Frame = 1 
Query:  190 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFM-PTNPNGAL 543
            A+KRI +E+ ++  +P     + P+ +++F WQ  I GP D+ ++GG++   I  P +YPFKPP     T    PN    +   ICL I       W P+ ++   L+++ + +   NP+  L
Sbjct:    2 ALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPN--INSNGSICLDILR---SQWSPALTISKVLLSICSLLCDPNPDDPL 119
[Close]
BLAST of EY692453 vs. ExPASy Swiss-Prot
Match: UB2D3_MACFA (Ubiquitin-conjugating enzyme E2 D3 OS=Macaca fascicularis GN=UBE2D3 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.185e-11
Identity = 37/123 (30.08%), Postives = 64/123 (52.03%), Query Frame = 1 
Query:  190 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFM-PTNPNGAL 543
            A+KRI +E+ ++  +P     + P+ +++F WQ  I GP D+ ++GG++   I  P +YPFKPP     T    PN    +   ICL I       W P+ ++   L+++ + +   NP+  L
Sbjct:    2 ALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPN--INSNGSICLDILR---SQWSPALTISKVLLSICSLLCDPNPDDPL 119
[Close]
BLAST of EY692453 vs. ExPASy Swiss-Prot
Match: UB2D3_HUMAN (Ubiquitin-conjugating enzyme E2 D3 OS=Homo sapiens GN=UBE2D3 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.185e-11
Identity = 37/123 (30.08%), Postives = 64/123 (52.03%), Query Frame = 1 
Query:  190 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFM-PTNPNGAL 543
            A+KRI +E+ ++  +P     + P+ +++F WQ  I GP D+ ++GG++   I  P +YPFKPP     T    PN    +   ICL I       W P+ ++   L+++ + +   NP+  L
Sbjct:    2 ALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPN--INSNGSICLDILR---SQWSPALTISKVLLSICSLLCDPNPDDPL 119
[Close]
BLAST of EY692453 vs. ExPASy Swiss-Prot
Match: UB2D2_XENLA (Ubiquitin-conjugating enzyme E2 D2 OS=Xenopus laevis GN=ube2d2 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.185e-11
Identity = 37/123 (30.08%), Postives = 64/123 (52.03%), Query Frame = 1 
Query:  190 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFM-PTNPNGAL 543
            A+KRI +E+ ++  +P     + P+ +++F WQ  I GP D+ ++GG++   I  P +YPFKPP     T    PN    +   ICL I       W P+ ++   L+++ + +   NP+  L
Sbjct:    2 ALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPN--INSNGSICLDILR---SQWSPALTISKVLLSICSLLCDPNPDDPL 119
[Close]
BLAST of EY692453 vs. ExPASy Swiss-Prot
Match: UB2D2_RAT (Ubiquitin-conjugating enzyme E2 D2 OS=Rattus norvegicus GN=Ube2d2 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.185e-11
Identity = 37/123 (30.08%), Postives = 64/123 (52.03%), Query Frame = 1 
Query:  190 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFM-PTNPNGAL 543
            A+KRI +E+ ++  +P     + P+ +++F WQ  I GP D+ ++GG++   I  P +YPFKPP     T    PN    +   ICL I       W P+ ++   L+++ + +   NP+  L
Sbjct:    2 ALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPN--INSNGSICLDILR---SQWSPALTISKVLLSICSLLCDPNPDDPL 119
[Close]
BLAST of EY692453 vs. ExPASy Swiss-Prot
Match: UB2D2_PIG (Ubiquitin-conjugating enzyme E2 D2 OS=Sus scrofa GN=UBE2D2 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.185e-11
Identity = 37/123 (30.08%), Postives = 64/123 (52.03%), Query Frame = 1 
Query:  190 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFM-PTNPNGAL 543
            A+KRI +E+ ++  +P     + P+ +++F WQ  I GP D+ ++GG++   I  P +YPFKPP     T    PN    +   ICL I       W P+ ++   L+++ + +   NP+  L
Sbjct:    2 ALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPN--INSNGSICLDILR---SQWSPALTISKVLLSICSLLCDPNPDDPL 119
[Close]
BLAST of EY692453 vs. ExPASy Swiss-Prot
Match: UB2D2_MOUSE (Ubiquitin-conjugating enzyme E2 D2 OS=Mus musculus GN=Ube2d2 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.185e-11
Identity = 37/123 (30.08%), Postives = 64/123 (52.03%), Query Frame = 1 
Query:  190 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFM-PTNPNGAL 543
            A+KRI +E+ ++  +P     + P+ +++F WQ  I GP D+ ++GG++   I  P +YPFKPP     T    PN    +   ICL I       W P+ ++   L+++ + +   NP+  L
Sbjct:    2 ALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPN--INSNGSICLDILR---SQWSPALTISKVLLSICSLLCDPNPDDPL 119
The following BLAST results are available for this feature:
BLAST of EY692453 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
UB2D3_BOVIN3.970e-1130.08Ubiquitin-conjugating enzyme E2 D3 OS=Bos taurus G... [more]
UB2D3_RAT5.185e-1130.08Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norve... [more]
UB2D3_PONAB5.185e-1130.08Ubiquitin-conjugating enzyme E2 D3 OS=Pongo abelii... [more]
UB2D3_MOUSE5.185e-1130.08Ubiquitin-conjugating enzyme E2 D3 OS=Mus musculus... [more]
UB2D3_MACFA5.185e-1130.08Ubiquitin-conjugating enzyme E2 D3 OS=Macaca fasci... [more]
UB2D3_HUMAN5.185e-1130.08Ubiquitin-conjugating enzyme E2 D3 OS=Homo sapiens... [more]
UB2D2_XENLA5.185e-1130.08Ubiquitin-conjugating enzyme E2 D2 OS=Xenopus laev... [more]
UB2D2_RAT5.185e-1130.08Ubiquitin-conjugating enzyme E2 D2 OS=Rattus norve... [more]
UB2D2_PIG5.185e-1130.08Ubiquitin-conjugating enzyme E2 D2 OS=Sus scrofa G... [more]
UB2D2_MOUSE5.185e-1130.08Ubiquitin-conjugating enzyme E2 D2 OS=Mus musculus... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-071-G08-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692453 ID=EY692453; Name=EY692453; organism=Citrus sinensis; type=EST; length=1007bp
TCGGGGTCCGGGTCGGTATTCCCGGGTCGACCACGCGTCCGCGGACGCGT
GGGCTTTGCAATCGGCTTTCCTACAAAGACTTTTGTCTGCTCGTTCGCAT
ACAAAGTCCTGATAGGACGGTGGACGTGAACCGATCGAAATCAGATCTGA
AATCCAATGGCGGAAGACAGGTACAATTTGAAAAATCCTGCGGTGAAGAG
AATCCTACAGGAGGTCAAAGAGATGCAATCAAATCCGTCAGATGATTTCA
TGAGCCTCCCTCTCGAGGAGAATATATTTGAATGGCAATTTGCGATCAGG
GGACCGGGTGATACTGAATTTGAAGGTGGGATTTATCATGGTCGGATTCA
GTTGCCTGCGGAATACCCATTCAAGCCTCCTTCATTTATGCTCTTAACAC
CAAATGGGCGTTTTGAAACTCAGACCAAAATATGCTTAAGCATTTCGAAT
CATCATCCGGAGCACTGGCAACCATCTTGGAGTGTGAGGACTGCTCTTGT
AGCACTAATTGCTTTCATGCCCACCAATCCAAATGGTGCTTTGGGCTCAC
TAGATTATAAGAAGGAAGAGAGGCGTGCTCTGGCCATCAAATCTCGTGAA
GCTGCCCCCAAATTTGGGACTCCTGAACGTCAAAAACTCATTGATGAGAT
CCATGAATATATGTTAAGCAAGGCACCCCCTGTCCCTCAGCTCCACACCT
GGTGAAGAACAGCCTGGCAACAGGGAGGGTGAAACACAGGCAAAGTTCCC
TAGACGCCTTGGTTGCGGGGGCTGGGGGAAGGGGTCCCCACCCCCGTAGG
GGAAAGGATTTTTTGGAAAAAATTTCAGGAGAGGTTCCCGGCCCACCGTG
AACCCCCCCCCCCGAATGGGGTGGAAATATAAAAAGCAGTTTCTGGCCAC
AACCCCCCCAGGAAGCCCCACCTTCCCACCCAAAACGCCAGAAACCTAGG
GGTTCTAAAAAAGCCCTGGGTAAAAAGAAGATGCGGGTATCTCAAGGGAG
AACGCGG
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