EY692450

Overview
NameEY692450
Unique NameEY692450
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length954
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692450 vs. ExPASy Swiss-Prot
Match: YJGB_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein yjgB OS=Escherichia coli (strain K12) GN=yjgB PE=3 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 2.894e-16
Identity = 51/138 (36.96%), Postives = 76/138 (55.07%), Query Frame = 1
Query:  211 STSPSKKTEVLEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLVGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSNTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVI 624
            S++P+K+ EVL  +GAD  +NSRDP  L+   G  D II+TV+      P    L   G    VGA   PL +P  +LI G ++VSGS TG   E ++++ FAA+  +    E+  M  +N A++ +     RYR V+
Sbjct:  199 SSNPAKEQEVLA-MGADKVVNSRDPQALKALAGQFDLIINTVNVSLDWQPYFEALTYGGNFHTVGAVLTPLSVPAFTLIAGDRSVSGSATGTPYELRKLMRFAARSKVAPTTELFPMSKINDAIQHVRDGKARYRVVL 335          
BLAST of EY692450 vs. ExPASy Swiss-Prot
Match: YL498_MIMIV (Probable zinc-type alcohol dehydrogenase-like protein L498 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L498 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.634e-12
Identity = 50/192 (26.04%), Postives = 86/192 (44.79%), Query Frame = 1
Query:   67 CAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEVLEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLVGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSNTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 642
            CAG T YSPL+   +                                I+ +  K  + + +LGA+  + S +  Q+    G+ D I+ T+   H I+P + LLK +  +  VG    P  +  + L      +  S   G  E +EM+ F ++HNI  D+++I  D +N   ++L ++  +YR+VIDI  +L
Sbjct:  231 CAGATTYSPLRQAKVGP-GMKVGIVGIGGLGHIAVKIAKAMGAHVVAITRTEWKFKDSVNNLGANESILSTNVWQMNQHKGSFDFILSTIPMAHDIVPYIELLKYKATICTVGELF-PTVINGMDLAQHPCFLQSSLIAGSDEIKEMLAFCSEHNIMPDVQIIKADKINDTRQKLLESKAKYRYVIDIRASL 420          
BLAST of EY692450 vs. ExPASy Swiss-Prot
Match: ADHA_RHIME (Alcohol dehydrogenase OS=Rhizobium meliloti GN=adhA PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.661e-11
Identity = 40/137 (29.20%), Postives = 71/137 (51.82%), Query Frame = 1
Query:  229 KTEVLEHLGADSFLNSRDPD---QLQGAMGTLDGIIDTVSAVHPILPLVGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSNTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDI 630
            K  + E LGAD  +++R PD   ++Q   G L G + T  +   +     +L+S+G + LVG P   + LPV   ++ R TV GS  G  ++ +E ++FA +  + A      ++ +N   ER+ +  +  R V+D+
Sbjct:  202 KLALAEKLGADLVVDARAPDAVEEVQRRTGGLHGALVTAVSPKAMEQAYSMLRSKGTMALVGLPPGQICLPVFDTVLKRITVRGSIVGTRQDLEEALEFAGEGKVAAHFSWDKIENINAIFERMEEGKIDGRIVLDL 338          
The following BLAST results are available for this feature:
BLAST of EY692450 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
YJGB_ECOLI2.894e-1636.96Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
YL498_MIMIV9.634e-1226.04Probable zinc-type alcohol dehydrogenase-like prot... [more]
ADHA_RHIME3.661e-1129.20Alcohol dehydrogenase OS=Rhizobium meliloti GN=adh... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-071-G02-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692450 ID=EY692450; Name=EY692450; organism=Citrus sinensis; type=EST; length=954bp
GGTACCGGGTTCCGGATTCCCGGGTCGACCCCGCGTCCGCCCCTTGATGC
TGCTGCCCCCCTGCTTTGCGCCGGGATTACCGTGTACAGTCCATTGAAAT
ACTTTGGACTAGCAGAACAAGGAAAGCATGTAGGCATCGTTGGCCTTGGC
GGGCTTGGTCATGTCGCTGTCAAATTTGCCAAGGCTTTTGGGGCCAAAGT
GACAGTAATTAGCACCTCTCCAAGCAAGAAGACTGAAGTTCTTGAACATC
TTGGCGCTGATTCATTTTTGAATAGCCGTGACCCTGACCAATTGCAGGGT
GCTATGGGCACATTGGATGGTATTATTGACACGGTGTCCGCTGTGCACCC
CATTTTGCCATTGGTCGGTCTATTAAAGTCCCAGGGCAAGCTTGTTCTGG
TTGGTGCTCCGGACAAGCCACTCGAGCTACCTGTGATTTCCTTAATTATG
GGGAGGAAGACGGTGTCAGGGAGCAACACTGGGGGAATGAAAGAGACGCA
AGAGATGATTGATTTTGCAGCAAAACACAATATAACAGCTGACATTGAGG
TTATTTCGATGGATTATGTCAATACGGCAATGGAAAGGCTTGCCAAGGCT
GATGTTCGGTATCGATTTGTCATTGATATTGCAAACACCTTGTACGCCAC
CAAAACTTGAAAAATCAAAAATCAAATTGAATGTCTTCAATTCCCAACCT
TGTTCCATGATCCACTTTTGCAAAAGGTAATGCTCCCCCCAATCTTTAAA
CCTCTTTTAGCCGCTTAAAATTACTTTTAAATTCCCAGTTACATCGAACC
CCTATTTATGTCCGGGGTTTGCCCAAAAAAAATATAAAGGTTATATGAAA
AAAAAAACTTTGTTCACAATAAAAAAAAAAAAAAAAAAAGGGGGGGGCCC
CCTCCCAAAAGAATTAAAATCATTTAACATAACCCGGGATTAGCCACAAA
ATAA
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