EY692445
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: MSBA_VIBVY (Lipid A export ATP-binding/permease protein msbA OS=Vibrio vulnificus (strain YJ016) GN=msbA PE=3 SV=2) HSP 1 Score: 203.371 bits (516), Expect = 1.592e-51 Identity = 107/208 (51.44%), Postives = 141/208 (67.79%), Query Frame = 1 Query: 31 IPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAY 654 IP GKTVALVG SGSGKST+ L RFYD DSG + LD +++ ++L LR Q LVSQ LFN+TI NIAY ++A FIS + +G +T VGE G LSGGQ+QR+AIARA+L++ +L+LDEATSALD ESER +Q AL+ + N+T +V+AHRL+TI+ AD I V+ +G + E+GSH L++ DGAY Sbjct: 366 IPRGKTVALVGRSGSGKSTIANLFTRFYDVDSGEIQLDGVDVRDYELKNLRTQFALVSQNVHLFNDTIANNIAYAAGDKYSREDIERAAELAHAMEFISKMENGLDTVVGENGASLSGGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQSALDELQKNKTVLVIAHRLSTIEKADQILVIDDGAVVERGSHSELIE-KDGAY 572
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: MSBA_VIBCH (Lipid A export ATP-binding/permease protein msbA OS=Vibrio cholerae GN=msbA PE=1 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.592e-51 Identity = 109/209 (52.15%), Postives = 140/209 (66.99%), Query Frame = 1 Query: 28 SIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAY 654 SIP GKTVALVG SGSGKST+ L RFYD DSG + LD ++ +KL+ LR+ LVSQ LFN+TI NIAY +G ++A FI +P G +T +GE G LSGGQ+QR+AIARA+L++ +L+LDEATSALD ESER +Q AL+ + N+T +V+AHRL+TI+ AD I VV G I E+G H L+ DGAY Sbjct: 365 SIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGHDVRDYKLTNLRRHFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADEILVVDEGEIIERGRHADLL-AQDGAY 572
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: MSBA_SODGM (Lipid A export ATP-binding/permease protein msbA OS=Sodalis glossinidius (strain morsitans) GN=msbA PE=3 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.592e-51 Identity = 109/203 (53.69%), Postives = 141/203 (69.46%), Query Frame = 1 Query: 25 LSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALM 633 LSIP+G TVALVG SGSGKST+ L+ RFYD G +LLD +L +KL+ LR Q+ LVSQ LFN+TI NIAY ++ + A +FI + G +T +GE GV LSGGQ+QRIAIARA+L++ IL+LDEATSALD ESER +Q AL+ + NRT++V+AHRL+TI+ AD I VV G I E+G+H+ LM Sbjct: 364 LSIPTGHTVALVGRSGSGKSTIANLLTRFYDIQQGQILLDGTDLRAYKLASLRNQVALVSQNVHLFNDTIANNIAYARKATYSRKQIENAARMAYAMDFIEKMDQGLDTVIGENGVLLSGGQRQRIAIARALLRDCPILILDEATSALDTESERAIQKALDALQKNRTSLVIAHRLSTIEKADEILVVVEGRIVERGNHEELM 566
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: MSBA_PSEF5 (Lipid A export ATP-binding/permease protein msbA OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=msbA PE=3 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.592e-51 Identity = 109/202 (53.96%), Postives = 139/202 (68.81%), Query Frame = 1 Query: 28 SIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALM 633 SI GK VALVG SGSGKST+ LI RFY D G +LLD E+ F+L LR+ + V+Q LF++T+ NIAYG G + A +FI+ LP G +T VGE GV LSGGQ+QR+AIARA+LKN +L+LDEATSALD ESER +Q AL++VM RTT+V+AHRL+TI+ AD+I V+ G I E+GSH L+ Sbjct: 377 SIEPGKMVALVGRSGSGKSTLANLIPRFYHHDKGQILLDGTEVEDFRLLNLRRHIAQVTQHVTLFSDTVANNIAYGDLAGAPREDIEKAAADAYAMDFIAQLPEGLDTQVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDKVMKGRTTLVIAHRLSTIEKADLILVMDQGRIVERGSHAQLL 578
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: MSBA_AZOSE (Lipid A export ATP-binding/permease protein msbA OS=Azoarcus sp. (strain EbN1) GN=msbA PE=3 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.592e-51 Identity = 105/202 (51.98%), Postives = 139/202 (68.81%), Query Frame = 1 Query: 28 SIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALM 633 ++ G+ +ALVG SGSGKST+ LI RFY D G +L+D +++ + L LR+ + LV+Q+ LFN+T+ NIAYG G A FI LP G++T +GE GV LSGGQ+QR+AIARA+LKN IL+LDEATSALD ESER +Q AL RVM RTT+V+AHRL+TI+ AD+I V+ +G I E+GSH L+ Sbjct: 376 TVEPGQMIALVGRSGSGKSTLANLIPRFYHHDRGQILIDGVDVEDYTLKNLRRHIALVTQQVTLFNDTVANNIAYGDLAGLPRAAVEAAAEAGYAKEFIDRLPQGFDTLIGENGVTLSGGQRQRLAIARALLKNAPILILDEATSALDTESERHIQAALHRVMQARTTLVIAHRLSTIEQADVIMVMDHGRIVERGSHAELL 577
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: MSBA_VIBVU (Lipid A export ATP-binding/permease protein msbA OS=Vibrio vulnificus GN=msbA PE=3 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 2.079e-51 Identity = 107/208 (51.44%), Postives = 141/208 (67.79%), Query Frame = 1 Query: 31 IPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAY 654 IP GKTVALVG SGSGKST+ L RFYD DSG + LD +++ ++L LR Q LVSQ LFN+TI NIAY ++A FIS + +G +T VGE G LSGGQ+QR+AIARA+L++ +L+LDEATSALD ESER +Q AL+ + N+T +V+AHRL+TI+ AD I V+ +G + E+GSH L++ DGAY Sbjct: 366 IPRGKTVALVGRSGSGKSTIANLFTRFYDVDSGEIQLDGVDVRDYELKNLRTQFALVSQNVHLFNDTIANNIAYAAGDKYSREDIERAAELAHAMEFISKMENGLDTMVGENGASLSGGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQSALDELQKNKTVLVIAHRLSTIEKADQILVIDDGSVVERGSHSELIE-KDGAY 572
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: LKTB_MANGL (Leukotoxin translocation ATP-binding protein lktB OS=Mannheimia glucosida GN=lktB PE=3 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 2.079e-51 Identity = 104/217 (47.93%), Postives = 146/217 (67.28%), Query Frame = 1 Query: 4 SIFRNSCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAY 654 +I N L I G+ + +VG SGSGKST+ L++RFY P++G VL+D +L +WLR+Q+G+V Q+ VL N +IR NIA + G + AH+FIS L GY T VGE+G LSGGQ+QRIAIARA++ NPKIL+ DEATSALD ESE ++ ++++ RT +++AHRL+T+KNAD I V++ G I EQG H L++ ++G Y Sbjct: 484 TILNNVNLEIKKGEVIGIVGRSGSGKSTLTKLLQRFYIPENGQVLIDGHDLALADPNWLRRQIGVVLQDNVLLNRSIRENIALSEPG-MSMERVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHIIMQNMQKICQGRTVILIAHRLSTVKNADRIIVMEKGEIVEQGKHHELLQNSNGLY 699
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: Y4GM_RHISN (Uncharacterized ABC transporter ATP-binding protein y4gM OS=Rhizobium sp. (strain NGR234) GN=NGR_a03510 PE=3 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 2.715e-51 Identity = 106/216 (49.07%), Postives = 147/216 (68.06%), Query Frame = 1 Query: 7 IFRNSCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAY 654 +F+N ++ P+GKT ALVG SG+GKS++I LI R YDPD G V +D +L LR ++G V Q+ LF+ TI+ NI+ G++G +NAH+FI +PHGY+T VGE G++LSGGQKQRI IARA+L+N +IL+ DEATSALD+ESE ++ AL R+ RTT+++AHRL+T+ AD I V++ G +AEQG L+ DG Y Sbjct: 361 LFQNLNVTFPAGKTTALVGPSGAGKSSIINLIMRLYDPDVGSVTVDGHDLKDVTFRSLRDRIGFVGQDTFLFSGTIKYNISLGREGASDEEIIEAAKT-ANAHDFIMKMPHGYDTEVGENGIKLSGGQKQRITIARAMLRNAEILIFDEATSALDSESEIQIRQALARLTRKRTTIMIAHRLSTVTAADNIVVMEGGQVAEQGPQGRLLS-QDGVY 574
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: MSBA_RHOFD (Lipid A export ATP-binding/permease protein msbA OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=msbA PE=3 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 2.715e-51 Identity = 109/202 (53.96%), Postives = 141/202 (69.80%), Query Frame = 1 Query: 31 IPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMK 636 I +G+TVALVG SG GKST+ ALI RFY SG VL+D I++ L+ LRQ + LVSQ +LFN+T+ NIAYG +NA +FI LP+G +T +GE G +LSGGQ+QR+AIARA+LK+ IL+LDEATSALD ESER VQ AL +M NRTT+V+AHRL+TI++AD I V+ G I E G+H L++ Sbjct: 367 ITAGQTVALVGASGGGKSTISALIPRFYPVTSGRVLVDGIDINDITLASLRQNIALVSQNVILFNDTVGANIAYGSLQTCSRDDVIRAARAANAWDFIEQLPNGLDTPIGENGAKLSGGQRQRLAIARALLKDAPILILDEATSALDTESERQVQAALAVLMKNRTTLVIAHRLSTIEHADCILVLDQGRIVETGTHAELLR 568
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: MSBA_PSEAE (Lipid A export ATP-binding/permease protein msbA OS=Pseudomonas aeruginosa GN=msbA PE=3 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 2.715e-51 Identity = 103/198 (52.02%), Postives = 139/198 (70.20%), Query Frame = 1 Query: 40 GKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALM 633 G+ +ALVG SGSGKST+ L+ RFY + G +LLD +E+ ++L LR+ + LV+Q+ LFN+++ NIAYG G +NA FI LP G++T VGE GV LSGGQ+QR+AIARA+LK+ +L+LDEATSALD ESER +Q AL+ VM RTT+V+AHRL+TI+ AD+I V+ G I E+GSH L+ Sbjct: 383 GQMIALVGRSGSGKSTLANLVPRFYQHNDGKILLDGVEVEDYRLRNLRRHIALVTQQVTLFNDSVANNIAYGDLAGAPREEIERAAKAANAKEFIDNLPQGFDTEVGENGVLLSGGQRQRLAIARALLKDAPLLILDEATSALDTESERHIQAALDEVMKGRTTLVIAHRLSTIEKADLILVMDQGQIVERGSHAELL 580 The following BLAST results are available for this feature:
BLAST of EY692445 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY692445 ID=EY692445; Name=EY692445; organism=Citrus sinensis; type=EST; length=944bpback to top |