EY692445
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: MSBA_PSEU2 (Lipid A export ATP-binding/permease protein msbA OS=Pseudomonas syringae pv. syringae (strain B728a) GN=msbA PE=3 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 3.547e-51 Identity = 106/209 (50.72%), Postives = 140/209 (66.99%), Query Frame = 1 Query: 7 IFRNSCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALM 633 + + S G+ +ALVG SGSGKST+ LI RFY D G++LLD +E+ ++L LR+ + V+Q LFN+TI NIAYG G + A FI LP G++T VGE GV LSGGQ+QR+AIARA+LKN +L+LDEATSALD ESER +Q AL+ VM RTT+V+AHRL+TI+ AD+I V+ G I E+G+H L+ Sbjct: 369 VLNDISFSAAPGQMIALVGRSGSGKSTLANLIPRFYGHDIGNILLDGVEINDYRLRNLRRHIAQVNQNVTLFNDTIANNIAYGDLAGAPRADIEAAAADAYAREFIDQLPQGFDTQVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDHVMKGRTTLVIAHRLSTIEKADLILVMDAGQIVERGTHTELL 577
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: MSBA_VIBF1 (Lipid A export ATP-binding/permease protein msbA OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=msbA PE=3 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 4.632e-51 Identity = 104/214 (48.60%), Postives = 144/214 (67.29%), Query Frame = 1 Query: 13 RNSCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAY 654 RN +P+GKT+ALVG SGSGKST+ L RFYD DSG + LD ++ ++L LR+ LVSQ LFN+T+ NIAY +G + A +FI+ + G++T +GE G LSGGQ+QRIAIARA+L+N +L+LDEATSALD ESE+ +Q AL+ + ++T +V+AHRL+TI++AD I VV G + E+G+H L+ DGAY Sbjct: 360 RNVSFDLPAGKTIALVGRSGSGKSTIANLFTRFYDVDSGEISLDGDKIEDYRLPNLRKHFALVSQNVHLFNDTVANNIAYASEGKFTRLEIEKAAELAYASDFINKMDDGFDTMIGENGASLSGGQRQRIAIARALLQNAPVLILDEATSALDTESEKAIQSALDELQKDKTVLVIAHRLSTIEDADQILVVDEGEVVERGNHAELI-AHDGAY 572
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: MSBA_LEGPH (Lipid A export ATP-binding/permease protein msbA OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=msbA PE=3 SV=2) HSP 1 Score: 201.83 bits (512), Expect = 4.632e-51 Identity = 110/208 (52.88%), Postives = 144/208 (69.23%), Query Frame = 1 Query: 31 IPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAY 654 I +G +VALVG SGSGK+T+ +L+ RFY+ G + LD + + + L LR+QM LVSQ LFN+T+ NIAYG+ + A FI LP GY+T VGE GV LSGGQ+QRIAIARA+LK+ IL+LDEATSALD+ESE +Q ALE+VM RTT+++AHRL+TIK+A I V+++G I EQGSH L+ + DG Y Sbjct: 365 IEAGTSVALVGHSGSGKTTIASLLPRFYELSQGMITLDGMPIQQLSLESLRKQMSLVSQNVTLFNDTLANNIAYGRFDASREQIITAAKL-AYADEFIKQLPDGYDTRVGENGVLLSGGQRQRIAIARAILKDAPILILDEATSALDSESEHYIQAALEQVMKGRTTLIIAHRLSTIKHAHKIIVLQHGRIVEQGSHQELLDM-DGHY 570
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: LKTB_PASTR (Leukotoxin translocation ATP-binding protein lktB OS=Pasteurella trehalosi GN=lktB PE=3 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 4.632e-51 Identity = 104/217 (47.93%), Postives = 145/217 (66.82%), Query Frame = 1 Query: 4 SIFRNSCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAY 654 +I N L I G+ + +VG SGSGKST+ L++RFY P++G VL+D +L +WLR+Q+G+V Q+ VL N +IR NIA G + AH+FIS L GY T VGE+G LSGGQ+QRIAIARA++ NPKIL+ DEATSALD ESE ++ ++++ RT +++AHRL+T+KNAD I V++ G I EQG H L++ ++G Y Sbjct: 484 TILNNVNLEIRQGEVIGIVGRSGSGKSTLTKLLQRFYIPENGQVLIDGHDLALADPNWLRRQIGVVLQDNVLLNRSIRENIALSDPG-MPMERVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHIIMQNMQKICQGRTVILIAHRLSTVKNADRIIVMEKGEIVEQGKHHELLQNSNGLY 699
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: LKTB_PASSP (Leukotoxin translocation ATP-binding protein lktB OS=Pasteurella haemolytica-like sp. (strain 5943B) GN=lktB PE=3 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 4.632e-51 Identity = 103/217 (47.47%), Postives = 146/217 (67.28%), Query Frame = 1 Query: 4 SIFRNSCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAY 654 +I N L I G+ + +VG SGSGKST+ L++RFY P++G VL+D +L +WLR+Q+G+V Q+ VL N +IR NIA + G + AH+FIS + GY T VGE+G LSGGQ+QRIAIARA++ NPKIL+ DEATSALD ESE ++ ++++ RT +++AHRL+T+KNAD I V++ G I EQG H+ L++ +G Y Sbjct: 484 TILNNVNLEIKKGEVIGIVGRSGSGKSTLTKLLQRFYIPENGQVLIDGHDLALADPNWLRRQIGVVLQDNVLLNRSIRENIALSEPG-MSMERVIYAAKLAGAHDFISDVREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHIIMQNMQKICQGRTVILIAHRLSTVKNADRIIVMEKGEIVEQGKHNELLQNNNGLY 699
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: LKTB7_PASHA (Leukotoxin translocation ATP-binding protein lktB OS=Pasteurella haemolytica GN=lktB PE=3 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 4.632e-51 Identity = 104/217 (47.93%), Postives = 145/217 (66.82%), Query Frame = 1 Query: 4 SIFRNSCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAY 654 +I N L I G+ + +VG SGSGKST+ L++RFY P++G VL+D +L +WLR+Q+G+V Q+ VL N +IR NIA G + AH+FIS L GY T VGE+G LSGGQ+QRIAIARA++ NPKIL+ DEATSALD ESE ++ ++++ RT +++AHRL+T+KNAD I V++ G I EQG H L++ ++G Y Sbjct: 484 TILNNVNLEIRQGEVIGIVGRSGSGKSTLTKLLQRFYIPENGQVLIDGHDLALADPNWLRRQIGVVLQDNVLLNRSIRENIALSDPG-MPMERVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHIIMQNMQKICQGRTVILIAHRLSTVKNADRIIVMEKGEIVEQGKHHELLQNSNGLY 699
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: LKB2B_PASHA (Leukotoxin translocation ATP-binding protein lktB OS=Pasteurella haemolytica GN=lktB PE=3 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 4.632e-51 Identity = 104/217 (47.93%), Postives = 145/217 (66.82%), Query Frame = 1 Query: 4 SIFRNSCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAY 654 +I N L I G+ + +VG SGSGKST+ L++RFY P++G VL+D +L +WLR+Q+G+V Q+ VL N +IR NIA G + AH+FIS L GY T VGE+G LSGGQ+QRIAIARA++ NPKIL+ DEATSALD ESE ++ ++++ RT +++AHRL+T+KNAD I V++ G I EQG H L++ ++G Y Sbjct: 484 TILNNVNLEIRQGEVIGIVGRSGSGKSTLTKLLQRFYIPENGQVLIDGHDLALADPNWLRRQIGVVLQDNVLLNRSIRENIALSDPG-MPMERVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHIIMQNMQKICQGRTVILIAHRLSTVKNADRIIVMEKGEIVEQGKHHELLQNSNGLY 699
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: LKB2A_PASHA (Leukotoxin translocation ATP-binding protein lktB OS=Pasteurella haemolytica GN=lktB PE=3 SV=2) HSP 1 Score: 201.83 bits (512), Expect = 4.632e-51 Identity = 104/217 (47.93%), Postives = 145/217 (66.82%), Query Frame = 1 Query: 4 SIFRNSCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAY 654 +I N L I G+ + +VG SGSGKST+ L++RFY P++G VL+D +L +WLR+Q+G+V Q+ VL N +IR NIA G + AH+FIS L GY T VGE+G LSGGQ+QRIAIARA++ NPKIL+ DEATSALD ESE ++ ++++ RT +++AHRL+T+KNAD I V++ G I EQG H L++ ++G Y Sbjct: 484 TILNNVNLEIRQGEVIGIVGRSGSGKSTLTKLLQRFYIPENGQVLIDGHDLALADPNWLRRQIGVVLQDNVLLNRSIRENIALSDPG-MPMERVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHIIMQNMQKICQGRTVILIAHRLSTVKNADRIIVMEKGEIVEQGKHHELLQNSNGLY 699
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: LKB1B_PASHA (Leukotoxin translocation ATP-binding protein lktB OS=Pasteurella haemolytica GN=lktB PE=3 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 4.632e-51 Identity = 104/217 (47.93%), Postives = 145/217 (66.82%), Query Frame = 1 Query: 4 SIFRNSCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAY 654 +I N L I G+ + +VG SGSGKST+ L++RFY P++G VL+D +L +WLR+Q+G+V Q+ VL N +IR NIA G + AH+FIS L GY T VGE+G LSGGQ+QRIAIARA++ NPKIL+ DEATSALD ESE ++ ++++ RT +++AHRL+T+KNAD I V++ G I EQG H L++ ++G Y Sbjct: 484 TILNNVNLEIRQGEVIGIVGRSGSGKSTLTKLLQRFYIPENGQVLIDGHDLALADPNWLRRQIGVVLQDNVLLNRSIRENIALSDPG-MPMERVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHIIMQNMQKICQGRTVILIAHRLSTVKNADRIIVMEKGEIVEQGKHHELLQNSNGLY 699
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: LKB1A_PASHA (Leukotoxin translocation ATP-binding protein lktB OS=Pasteurella haemolytica GN=lktB PE=3 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 4.632e-51 Identity = 104/217 (47.93%), Postives = 145/217 (66.82%), Query Frame = 1 Query: 4 SIFRNSCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAY 654 +I N L I G+ + +VG SGSGKST+ L++RFY P++G VL+D +L +WLR+Q+G+V Q+ VL N +IR NIA G + AH+FIS L GY T VGE+G LSGGQ+QRIAIARA++ NPKIL+ DEATSALD ESE ++ ++++ RT +++AHRL+T+KNAD I V++ G I EQG H L++ ++G Y Sbjct: 484 TILNNVNLEIRQGEVIGIVGRSGSGKSTLTKLLQRFYIPENGQVLIDGHDLALADPNWLRRQIGVVLQDNVLLNRSIRENIALSDPG-MPMERVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHIIMQNMQKICQGRTVILIAHRLSTVKNADRIIVMEKGEIVEQGKHHELLQNSNGLY 699 The following BLAST results are available for this feature:
BLAST of EY692445 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY692445 ID=EY692445; Name=EY692445; organism=Citrus sinensis; type=EST; length=944bpback to top |