EY692445

Overview
NameEY692445
Unique NameEY692445
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length944
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: MSBA_PSEU2 (Lipid A export ATP-binding/permease protein msbA OS=Pseudomonas syringae pv. syringae (strain B728a) GN=msbA PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 3.547e-51
Identity = 106/209 (50.72%), Postives = 140/209 (66.99%), Query Frame = 1
Query:    7 IFRNSCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALM 633
            +  +   S   G+ +ALVG SGSGKST+  LI RFY  D G++LLD +E+  ++L  LR+ +  V+Q   LFN+TI  NIAYG   G            + A  FI  LP G++T VGE GV LSGGQ+QR+AIARA+LKN  +L+LDEATSALD ESER +Q AL+ VM  RTT+V+AHRL+TI+ AD+I V+  G I E+G+H  L+
Sbjct:  369 VLNDISFSAAPGQMIALVGRSGSGKSTLANLIPRFYGHDIGNILLDGVEINDYRLRNLRRHIAQVNQNVTLFNDTIANNIAYGDLAGAPRADIEAAAADAYAREFIDQLPQGFDTQVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDHVMKGRTTLVIAHRLSTIEKADLILVMDAGQIVERGTHTELL 577          
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: MSBA_VIBF1 (Lipid A export ATP-binding/permease protein msbA OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=msbA PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 4.632e-51
Identity = 104/214 (48.60%), Postives = 144/214 (67.29%), Query Frame = 1
Query:   13 RNSCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAY 654
            RN    +P+GKT+ALVG SGSGKST+  L  RFYD DSG + LD  ++  ++L  LR+   LVSQ   LFN+T+  NIAY  +G             + A +FI+ +  G++T +GE G  LSGGQ+QRIAIARA+L+N  +L+LDEATSALD ESE+ +Q AL+ +  ++T +V+AHRL+TI++AD I VV  G + E+G+H  L+   DGAY
Sbjct:  360 RNVSFDLPAGKTIALVGRSGSGKSTIANLFTRFYDVDSGEISLDGDKIEDYRLPNLRKHFALVSQNVHLFNDTVANNIAYASEGKFTRLEIEKAAELAYASDFINKMDDGFDTMIGENGASLSGGQRQRIAIARALLQNAPVLILDEATSALDTESEKAIQSALDELQKDKTVLVIAHRLSTIEDADQILVVDEGEVVERGNHAELI-AHDGAY 572          
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: MSBA_LEGPH (Lipid A export ATP-binding/permease protein msbA OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=msbA PE=3 SV=2)

HSP 1 Score: 201.83 bits (512), Expect = 4.632e-51
Identity = 110/208 (52.88%), Postives = 144/208 (69.23%), Query Frame = 1
Query:   31 IPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAY 654
            I +G +VALVG SGSGK+T+ +L+ RFY+   G + LD + + +  L  LR+QM LVSQ   LFN+T+  NIAYG+               + A  FI  LP GY+T VGE GV LSGGQ+QRIAIARA+LK+  IL+LDEATSALD+ESE  +Q ALE+VM  RTT+++AHRL+TIK+A  I V+++G I EQGSH  L+ + DG Y
Sbjct:  365 IEAGTSVALVGHSGSGKTTIASLLPRFYELSQGMITLDGMPIQQLSLESLRKQMSLVSQNVTLFNDTLANNIAYGRFDASREQIITAAKL-AYADEFIKQLPDGYDTRVGENGVLLSGGQRQRIAIARAILKDAPILILDEATSALDSESEHYIQAALEQVMKGRTTLIIAHRLSTIKHAHKIIVLQHGRIVEQGSHQELLDM-DGHY 570          
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: LKTB_PASTR (Leukotoxin translocation ATP-binding protein lktB OS=Pasteurella trehalosi GN=lktB PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 4.632e-51
Identity = 104/217 (47.93%), Postives = 145/217 (66.82%), Query Frame = 1
Query:    4 SIFRNSCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAY 654
            +I  N  L I  G+ + +VG SGSGKST+  L++RFY P++G VL+D  +L     +WLR+Q+G+V Q+ VL N +IR NIA    G             + AH+FIS L  GY T VGE+G  LSGGQ+QRIAIARA++ NPKIL+ DEATSALD ESE ++   ++++   RT +++AHRL+T+KNAD I V++ G I EQG H  L++ ++G Y
Sbjct:  484 TILNNVNLEIRQGEVIGIVGRSGSGKSTLTKLLQRFYIPENGQVLIDGHDLALADPNWLRRQIGVVLQDNVLLNRSIRENIALSDPG-MPMERVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHIIMQNMQKICQGRTVILIAHRLSTVKNADRIIVMEKGEIVEQGKHHELLQNSNGLY 699          
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: LKTB_PASSP (Leukotoxin translocation ATP-binding protein lktB OS=Pasteurella haemolytica-like sp. (strain 5943B) GN=lktB PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 4.632e-51
Identity = 103/217 (47.47%), Postives = 146/217 (67.28%), Query Frame = 1
Query:    4 SIFRNSCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAY 654
            +I  N  L I  G+ + +VG SGSGKST+  L++RFY P++G VL+D  +L     +WLR+Q+G+V Q+ VL N +IR NIA  + G             + AH+FIS +  GY T VGE+G  LSGGQ+QRIAIARA++ NPKIL+ DEATSALD ESE ++   ++++   RT +++AHRL+T+KNAD I V++ G I EQG H+ L++  +G Y
Sbjct:  484 TILNNVNLEIKKGEVIGIVGRSGSGKSTLTKLLQRFYIPENGQVLIDGHDLALADPNWLRRQIGVVLQDNVLLNRSIRENIALSEPG-MSMERVIYAAKLAGAHDFISDVREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHIIMQNMQKICQGRTVILIAHRLSTVKNADRIIVMEKGEIVEQGKHNELLQNNNGLY 699          
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: LKTB7_PASHA (Leukotoxin translocation ATP-binding protein lktB OS=Pasteurella haemolytica GN=lktB PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 4.632e-51
Identity = 104/217 (47.93%), Postives = 145/217 (66.82%), Query Frame = 1
Query:    4 SIFRNSCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAY 654
            +I  N  L I  G+ + +VG SGSGKST+  L++RFY P++G VL+D  +L     +WLR+Q+G+V Q+ VL N +IR NIA    G             + AH+FIS L  GY T VGE+G  LSGGQ+QRIAIARA++ NPKIL+ DEATSALD ESE ++   ++++   RT +++AHRL+T+KNAD I V++ G I EQG H  L++ ++G Y
Sbjct:  484 TILNNVNLEIRQGEVIGIVGRSGSGKSTLTKLLQRFYIPENGQVLIDGHDLALADPNWLRRQIGVVLQDNVLLNRSIRENIALSDPG-MPMERVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHIIMQNMQKICQGRTVILIAHRLSTVKNADRIIVMEKGEIVEQGKHHELLQNSNGLY 699          
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: LKB2B_PASHA (Leukotoxin translocation ATP-binding protein lktB OS=Pasteurella haemolytica GN=lktB PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 4.632e-51
Identity = 104/217 (47.93%), Postives = 145/217 (66.82%), Query Frame = 1
Query:    4 SIFRNSCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAY 654
            +I  N  L I  G+ + +VG SGSGKST+  L++RFY P++G VL+D  +L     +WLR+Q+G+V Q+ VL N +IR NIA    G             + AH+FIS L  GY T VGE+G  LSGGQ+QRIAIARA++ NPKIL+ DEATSALD ESE ++   ++++   RT +++AHRL+T+KNAD I V++ G I EQG H  L++ ++G Y
Sbjct:  484 TILNNVNLEIRQGEVIGIVGRSGSGKSTLTKLLQRFYIPENGQVLIDGHDLALADPNWLRRQIGVVLQDNVLLNRSIRENIALSDPG-MPMERVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHIIMQNMQKICQGRTVILIAHRLSTVKNADRIIVMEKGEIVEQGKHHELLQNSNGLY 699          
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: LKB2A_PASHA (Leukotoxin translocation ATP-binding protein lktB OS=Pasteurella haemolytica GN=lktB PE=3 SV=2)

HSP 1 Score: 201.83 bits (512), Expect = 4.632e-51
Identity = 104/217 (47.93%), Postives = 145/217 (66.82%), Query Frame = 1
Query:    4 SIFRNSCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAY 654
            +I  N  L I  G+ + +VG SGSGKST+  L++RFY P++G VL+D  +L     +WLR+Q+G+V Q+ VL N +IR NIA    G             + AH+FIS L  GY T VGE+G  LSGGQ+QRIAIARA++ NPKIL+ DEATSALD ESE ++   ++++   RT +++AHRL+T+KNAD I V++ G I EQG H  L++ ++G Y
Sbjct:  484 TILNNVNLEIRQGEVIGIVGRSGSGKSTLTKLLQRFYIPENGQVLIDGHDLALADPNWLRRQIGVVLQDNVLLNRSIRENIALSDPG-MPMERVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHIIMQNMQKICQGRTVILIAHRLSTVKNADRIIVMEKGEIVEQGKHHELLQNSNGLY 699          
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: LKB1B_PASHA (Leukotoxin translocation ATP-binding protein lktB OS=Pasteurella haemolytica GN=lktB PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 4.632e-51
Identity = 104/217 (47.93%), Postives = 145/217 (66.82%), Query Frame = 1
Query:    4 SIFRNSCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAY 654
            +I  N  L I  G+ + +VG SGSGKST+  L++RFY P++G VL+D  +L     +WLR+Q+G+V Q+ VL N +IR NIA    G             + AH+FIS L  GY T VGE+G  LSGGQ+QRIAIARA++ NPKIL+ DEATSALD ESE ++   ++++   RT +++AHRL+T+KNAD I V++ G I EQG H  L++ ++G Y
Sbjct:  484 TILNNVNLEIRQGEVIGIVGRSGSGKSTLTKLLQRFYIPENGQVLIDGHDLALADPNWLRRQIGVVLQDNVLLNRSIRENIALSDPG-MPMERVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHIIMQNMQKICQGRTVILIAHRLSTVKNADRIIVMEKGEIVEQGKHHELLQNSNGLY 699          
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: LKB1A_PASHA (Leukotoxin translocation ATP-binding protein lktB OS=Pasteurella haemolytica GN=lktB PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 4.632e-51
Identity = 104/217 (47.93%), Postives = 145/217 (66.82%), Query Frame = 1
Query:    4 SIFRNSCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAY 654
            +I  N  L I  G+ + +VG SGSGKST+  L++RFY P++G VL+D  +L     +WLR+Q+G+V Q+ VL N +IR NIA    G             + AH+FIS L  GY T VGE+G  LSGGQ+QRIAIARA++ NPKIL+ DEATSALD ESE ++   ++++   RT +++AHRL+T+KNAD I V++ G I EQG H  L++ ++G Y
Sbjct:  484 TILNNVNLEIRQGEVIGIVGRSGSGKSTLTKLLQRFYIPENGQVLIDGHDLALADPNWLRRQIGVVLQDNVLLNRSIRENIALSDPG-MPMERVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHIIMQNMQKICQGRTVILIAHRLSTVKNADRIIVMEKGEIVEQGKHHELLQNSNGLY 699          
The following BLAST results are available for this feature:
BLAST of EY692445 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MSBA_PSEU23.547e-5150.72Lipid A export ATP-binding/permease protein msbA O... [more]
MSBA_VIBF14.632e-5148.60Lipid A export ATP-binding/permease protein msbA O... [more]
MSBA_LEGPH4.632e-5152.88Lipid A export ATP-binding/permease protein msbA O... [more]
LKTB_PASTR4.632e-5147.93Leukotoxin translocation ATP-binding protein lktB ... [more]
LKTB_PASSP4.632e-5147.47Leukotoxin translocation ATP-binding protein lktB ... [more]
LKTB7_PASHA4.632e-5147.93Leukotoxin translocation ATP-binding protein lktB ... [more]
LKB2B_PASHA4.632e-5147.93Leukotoxin translocation ATP-binding protein lktB ... [more]
LKB2A_PASHA4.632e-5147.93Leukotoxin translocation ATP-binding protein lktB ... [more]
LKB1B_PASHA4.632e-5147.93Leukotoxin translocation ATP-binding protein lktB ... [more]
LKB1A_PASHA4.632e-5147.93Leukotoxin translocation ATP-binding protein lktB ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-071-F07-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692445 ID=EY692445; Name=EY692445; organism=Citrus sinensis; type=EST; length=944bp
TGTTCAATTTTTAGAAATTCATGCTTGAGCATCCCATCTGGAAAGACTGT
TGCTCTTGTTGGAGAGAGTGGTAGTGGAAAATCAACCGTCATTGCCCTTA
TAGAGAGATTCTATGATCCTGATTCTGGTCATGTACTTCTAGATAATATT
GAATTACCGAAGTTCAAACTAAGTTGGTTGAGGCAACAGATGGGTTTGGT
CAGCCAAGAGCCGGTACTCTTCAATGAAACCATCCGAACCAACATAGCCT
ATGGCAAACAAGGAGGAGCTACCGAAGAGGAGATCATTGCGGCTACAGAA
GCATCAAATGCACACAACTTCATAAGTGCATTGCCACATGGCTACGAGAC
CAATGTTGGGGAACGAGGAGTGCAGCTATCCGGTGGGCAGAAGCAGAGAA
TTGCCATAGCAAGAGCTGTATTAAAGAACCCAAAAATTCTTTTGCTTGAT
GAGGCAACAAGTGCACTGGATGCAGAATCAGAGCGTGTAGTACAAGATGC
ATTGGAGAGAGTGATGGTTAACAGGACAACTGTGGTTGTAGCTCACCGCC
TTACCACTATAAAAAATGCTGATATAATAGCTGTAGTGAAGAATGGTGTG
ATTGCAGAGCAGGGAAGCCATGATGCACTGATGAAAATCACTGATGGGGC
TTATGCTTCCTTGGTAGCTCTCCATGTGAGCTCATCATAAGGAGAAGCAG
AGTGCGTTACCAATAATTGAACACTTGACTTCATCTGTCCCGGGGCCCTC
ACCGTGGAAACTGAATTTTTTGTCAGCAGCAGTTTATTTTTGGCCCACCT
TTTTTACCTACCTTTAAAAAGTAGGAAACTATCTTTACCCTTTTCCCAAT
TTTCAAGAAAGGGAAATTTGAAAAAACTTTTGGAATTTTGGTATGAAATT
TTCCCTTTTAAAAAAATTTTTGAAAGCAATTTAACCCACGGGGA
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