EY692445

Overview
NameEY692445
Unique NameEY692445
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length944
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: MSBA_LEGPA (Lipid A export ATP-binding/permease protein msbA OS=Legionella pneumophila (strain Paris) GN=msbA PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.348e-50
Identity = 109/208 (52.40%), Postives = 144/208 (69.23%), Query Frame = 1
Query:   31 IPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAY 654
            I +G +VALVG SGSGK+T+ +L+ RFY+   G + LD + + +  L  LR+Q+ LVSQ   LFN+T+  NIAYG+               + A  FI  LP GY+T VGE GV LSGGQ+QRIAIARA+LK+  IL+LDEATSALD+ESE  +Q ALE+VM  RTT+++AHRL+TIK+A  I V+++G I EQGSH  L+ + DG Y
Sbjct:  365 IEAGTSVALVGHSGSGKTTIASLLPRFYELSQGMITLDGMPIQQLSLESLRKQISLVSQNVTLFNDTLANNIAYGRFDASREQIITAAKL-AYADEFIKQLPDGYDTRVGENGVLLSGGQRQRIAIARAILKDAPILILDEATSALDSESEHYIQAALEQVMKGRTTLIIAHRLSTIKHAHKIIVLQHGRIVEQGSHQELLDM-DGHY 570          
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: MSBA_COXBU (Lipid A export ATP-binding/permease protein msbA OS=Coxiella burnetii GN=msbA PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.348e-50
Identity = 107/217 (49.31%), Postives = 146/217 (67.28%), Query Frame = 1
Query:    4 SIFRNSCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAY 654
            +I      SI  G+ VA+VG SG+GKST+I L+ RFYD  +G + +D+I + +F+L  LR Q GLVSQ   LFN+TI  NIAYG+ G             ++A  FI  LP G +T +GE GV+LSGGQ+QRIAIARA+ KN  I +LDEATS+LD  SER +Q AL+ +M   TT+V+AHRL+TI+ AD I V++ G + E+G+H  L+ + +GAY
Sbjct:  354 TILSEISFSIEPGQMVAIVGRSGAGKSTLINLLPRFYDASTGVIKIDDINIKEFRLQELRNQFGLVSQHTTLFNDTILNNIAYGQAGSIDKRKIIEAARAAHAMEFIEQLPEGLDTVIGENGVRLSGGQRQRIAIARALFKNAPIHILDEATSSLDTHSERHIQAALDNLMDQCTTLVIAHRLSTIERADWIMVLEEGRLIEKGTHQQLLTL-NGAY 569          
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: MSBA_YERPS (Lipid A export ATP-binding/permease protein msbA OS=Yersinia pseudotuberculosis GN=msbA PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.760e-50
Identity = 105/210 (50.00%), Postives = 143/210 (68.10%), Query Frame = 1
Query:   25 LSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAY 654
            + + +GKTVALVG SGSGKST+  L+ RFYD   G +LLD  +L  ++L  LR Q+ LVSQ   LFN+T+  NIAY +               + A +FI+ + HG +T +GE G+ LSGGQ+QRIAIARA+L+N  IL+LDEATSALD ESER +Q AL+ +  NRT++V+AHRL+TI+ AD I V+++G I E+G H  L+ +  G Y
Sbjct:  364 IHLEAGKTVALVGRSGSGKSTIANLLTRFYDVSEGSILLDGHDLRDYRLGALRNQVALVSQNVHLFNDTVANNIAYARNEQYSRAEIEEAARMAYAMDFINKMEHGLDTVIGENGIMLSGGQRQRIAIARALLRNCPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVIEDGRIVERGVHAELL-VQQGVY 572          
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: MSBA_YERPN (Lipid A export ATP-binding/permease protein msbA OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=msbA PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.760e-50
Identity = 105/210 (50.00%), Postives = 143/210 (68.10%), Query Frame = 1
Query:   25 LSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAY 654
            + + +GKTVALVG SGSGKST+  L+ RFYD   G +LLD  +L  ++L  LR Q+ LVSQ   LFN+T+  NIAY +               + A +FI+ + HG +T +GE G+ LSGGQ+QRIAIARA+L+N  IL+LDEATSALD ESER +Q AL+ +  NRT++V+AHRL+TI+ AD I V+++G I E+G H  L+ +  G Y
Sbjct:  364 IHLEAGKTVALVGRSGSGKSTIANLLTRFYDVSEGSILLDGHDLRDYRLGALRNQVALVSQNVHLFNDTVANNIAYARNEQYSRAEIEEAARMAYAMDFINKMEHGLDTVIGENGIMLSGGQRQRIAIARALLRNCPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVIEDGRIVERGVHAELL-VQQGVY 572          
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: MSBA_YERPE (Lipid A export ATP-binding/permease protein msbA OS=Yersinia pestis GN=msbA PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.760e-50
Identity = 105/210 (50.00%), Postives = 143/210 (68.10%), Query Frame = 1
Query:   25 LSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAY 654
            + + +GKTVALVG SGSGKST+  L+ RFYD   G +LLD  +L  ++L  LR Q+ LVSQ   LFN+T+  NIAY +               + A +FI+ + HG +T +GE G+ LSGGQ+QRIAIARA+L+N  IL+LDEATSALD ESER +Q AL+ +  NRT++V+AHRL+TI+ AD I V+++G I E+G H  L+ +  G Y
Sbjct:  364 IHLEAGKTVALVGRSGSGKSTIANLLTRFYDVSEGSILLDGHDLRDYRLGALRNQVALVSQNVHLFNDTVANNIAYARNEQYSRAEIEEAARMAYAMDFINKMEHGLDTVIGENGIMLSGGQRQRIAIARALLRNCPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVIEDGRIVERGVHAELL-VQQGVY 572          
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: MSBA_YERPA (Lipid A export ATP-binding/permease protein msbA OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=msbA PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.760e-50
Identity = 105/210 (50.00%), Postives = 143/210 (68.10%), Query Frame = 1
Query:   25 LSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAY 654
            + + +GKTVALVG SGSGKST+  L+ RFYD   G +LLD  +L  ++L  LR Q+ LVSQ   LFN+T+  NIAY +               + A +FI+ + HG +T +GE G+ LSGGQ+QRIAIARA+L+N  IL+LDEATSALD ESER +Q AL+ +  NRT++V+AHRL+TI+ AD I V+++G I E+G H  L+ +  G Y
Sbjct:  364 IHLEAGKTVALVGRSGSGKSTIANLLTRFYDVSEGSILLDGHDLRDYRLGALRNQVALVSQNVHLFNDTVANNIAYARNEQYSRAEIEEAARMAYAMDFINKMEHGLDTVIGENGIMLSGGQRQRIAIARALLRNCPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVIEDGRIVERGVHAELL-VQQGVY 572          
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: MSBA_RALEJ (Lipid A export ATP-binding/permease protein msbA OS=Ralstonia eutropha (strain JMP134) GN=msbA PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.760e-50
Identity = 102/205 (49.76%), Postives = 142/205 (69.27%), Query Frame = 1
Query:   25 LSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAH--NFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALM 633
            + +P+G+ VALVG SGSGK+T++ L+ RF+DP  G +LLD   +    L  LR Q+  VSQ+ VLFN+T+  N+AYG +                A+    +  LP G  TN+G+ G++LSGGQ+QR+AIARA+ K+  IL+LDEATSALD+ESER VQ ALE +MV RTT+V+AHRL+TI+NAD I V+ +G +AE G+H+ L+
Sbjct:  369 IRVPAGEVVALVGPSGSGKTTLVNLVPRFFDPTDGRILLDGHAIGDIALRELRNQIAFVSQDVVLFNDTVAANVAYGARSEEEIDMARVERALQAAYLTEVVKNLPEGVNTNIGDNGMKLSGGQRQRLAIARAIYKDAPILILDEATSALDSESERQVQAALEALMVGRTTLVIAHRLSTIENADRIVVLDHGRVAEHGTHEELL 573          
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: MSBA_WIGBR (Lipid A export ATP-binding/permease protein msbA OS=Wigglesworthia glossinidia brevipalpis GN=msbA PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.299e-50
Identity = 104/204 (50.98%), Postives = 143/204 (70.10%), Query Frame = 1
Query:   25 LSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMK 636
            + I +G TVAL+G SG+GKST++ L+ RFY+ D G + LDNI L K+KLS LR Q+ LVSQ   LFN+TI  NIAY K+              + A +FI  + HG  T +GE G  LSGGQ+QRIAIARA+L++  IL+LDEATSALD ESE  VQ A++++  NRT++V+AHR++TIK +D+I +V+ G I E G+H+ L++
Sbjct:  363 IKISAGCTVALIGSSGAGKSTIVNLLTRFYEADKGSIFLDNINLKKYKLSNLRNQIALVSQNIYLFNDTIANNIAYAKKKIYSKYQIEKAAYMAYAMDFIIKMKHGLNTIIGENGTLLSGGQRQRIAIARALLRDCPILILDEATSALDIESEIKVQKAIDKIRKNRTSLVIAHRISTIKKSDMILLVEKGKIIEYGNHNELIE 566          
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: RTX1B_ACTPL (Toxin RTX-I translocation ATP-binding protein OS=Actinobacillus pleuropneumoniae GN=apxIB PE=1 SV=2)

HSP 1 Score: 199.134 bits (505), Expect = 3.002e-50
Identity = 104/210 (49.52%), Postives = 139/210 (66.19%), Query Frame = 1
Query:   25 LSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAY 654
            LSI  G+ + +VG SGSGKST+  LI+RFY P++G VL+D  +L     +WLR+Q+G+V Q+ VL N +IR NIA    G             + AH FIS L  GY T VGE+G  LSGGQ+QRIAIARA++ NPKIL+ DEATSALD ESE ++   + ++   RT +++AHRL+T+KNAD I V++ G I EQG H  L+   +G Y
Sbjct:  490 LSIQQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPNWLRRQVGVVLQDNVLLNRSIRDNIALADPG-MPMEKIVHAAKLAGAHEFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHIIMRNMHQICKGRTVIIIAHRLSTVKNADRIIVMEKGQIVEQGKHKELLADPNGLY 698          
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: MSBA_HAEDU (Lipid A export ATP-binding/permease protein msbA OS=Haemophilus ducreyi GN=msbA PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 3.002e-50
Identity = 105/209 (50.24%), Postives = 140/209 (66.99%), Query Frame = 1
Query:   28 SIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAY 654
            +IP GKTVALVG SGSGKST+ +L+ RFYD + G +LLD + + ++ L  LR+Q  +VSQ+  LFN+TI  NIAY  +              ++A  FI  L  G +T +GE G  LSGGQ+QR+AIARA+L+N  +L+LDEATSALD ESE  +Q AL  +  N+T +V+AHRL+TI+ AD I VV  G I E+GSH+ L+    GAY
Sbjct:  365 TIPQGKTVALVGRSGSGKSTIASLLTRFYDVNEGQILLDGVNIEEYTLENLREQCSVVSQQVHLFNDTIANNIAYAAKDKYSRAQIIAAAQAAHAMEFIEKLEQGLDTVIGENGASLSGGQRQRLAIARALLRNAPVLVLDEATSALDTESELAIQSALAALQKNKTVLVIAHRLSTIEKADEILVVDQGKIVERGSHEQLL-AKGGAY 572          
The following BLAST results are available for this feature:
BLAST of EY692445 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MSBA_LEGPA1.348e-5052.40Lipid A export ATP-binding/permease protein msbA O... [more]
MSBA_COXBU1.348e-5049.31Lipid A export ATP-binding/permease protein msbA O... [more]
MSBA_YERPS1.760e-5050.00Lipid A export ATP-binding/permease protein msbA O... [more]
MSBA_YERPN1.760e-5050.00Lipid A export ATP-binding/permease protein msbA O... [more]
MSBA_YERPE1.760e-5050.00Lipid A export ATP-binding/permease protein msbA O... [more]
MSBA_YERPA1.760e-5050.00Lipid A export ATP-binding/permease protein msbA O... [more]
MSBA_RALEJ1.760e-5049.76Lipid A export ATP-binding/permease protein msbA O... [more]
MSBA_WIGBR2.299e-5050.98Lipid A export ATP-binding/permease protein msbA O... [more]
RTX1B_ACTPL3.002e-5049.52Toxin RTX-I translocation ATP-binding protein OS=A... [more]
MSBA_HAEDU3.002e-5050.24Lipid A export ATP-binding/permease protein msbA O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-071-F07-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692445 ID=EY692445; Name=EY692445; organism=Citrus sinensis; type=EST; length=944bp
TGTTCAATTTTTAGAAATTCATGCTTGAGCATCCCATCTGGAAAGACTGT
TGCTCTTGTTGGAGAGAGTGGTAGTGGAAAATCAACCGTCATTGCCCTTA
TAGAGAGATTCTATGATCCTGATTCTGGTCATGTACTTCTAGATAATATT
GAATTACCGAAGTTCAAACTAAGTTGGTTGAGGCAACAGATGGGTTTGGT
CAGCCAAGAGCCGGTACTCTTCAATGAAACCATCCGAACCAACATAGCCT
ATGGCAAACAAGGAGGAGCTACCGAAGAGGAGATCATTGCGGCTACAGAA
GCATCAAATGCACACAACTTCATAAGTGCATTGCCACATGGCTACGAGAC
CAATGTTGGGGAACGAGGAGTGCAGCTATCCGGTGGGCAGAAGCAGAGAA
TTGCCATAGCAAGAGCTGTATTAAAGAACCCAAAAATTCTTTTGCTTGAT
GAGGCAACAAGTGCACTGGATGCAGAATCAGAGCGTGTAGTACAAGATGC
ATTGGAGAGAGTGATGGTTAACAGGACAACTGTGGTTGTAGCTCACCGCC
TTACCACTATAAAAAATGCTGATATAATAGCTGTAGTGAAGAATGGTGTG
ATTGCAGAGCAGGGAAGCCATGATGCACTGATGAAAATCACTGATGGGGC
TTATGCTTCCTTGGTAGCTCTCCATGTGAGCTCATCATAAGGAGAAGCAG
AGTGCGTTACCAATAATTGAACACTTGACTTCATCTGTCCCGGGGCCCTC
ACCGTGGAAACTGAATTTTTTGTCAGCAGCAGTTTATTTTTGGCCCACCT
TTTTTACCTACCTTTAAAAAGTAGGAAACTATCTTTACCCTTTTCCCAAT
TTTCAAGAAAGGGAAATTTGAAAAAACTTTTGGAATTTTGGTATGAAATT
TTCCCTTTTAAAAAAATTTTTGAAAGCAATTTAACCCACGGGGA
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