EY692445

Overview
NameEY692445
Unique NameEY692445
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length944
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: Y1806_STAAW (Putative multidrug export ATP-binding/permease protein MW1806 OS=Staphylococcus aureus (strain MW2) GN=MW1806 PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.440e-52
Identity = 112/216 (51.85%), Postives = 148/216 (68.52%), Query Frame = 1
Query:    7 IFRNSCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAY 654
            I ++  LSI  G+TVA VG SG GKST+I LI RFYD  SG +L+D   +  F    LR Q+GLV Q+ +LF++T++ NI  G+               +NAH+FI  LP GY+T VGERGV+LSGGQKQR++IAR  L NP IL+LDEATSALD ESE ++Q+AL+ +  +RTT++VAHRL+TI +AD I V++NG I E G+H  L+    GAY
Sbjct:  356 ILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKM-ANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELI-AKQGAY 569          
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: Y1799_STAAB (Putative multidrug export ATP-binding/permease protein SAB1799c OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=SAB1799c PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.440e-52
Identity = 112/216 (51.85%), Postives = 148/216 (68.52%), Query Frame = 1
Query:    7 IFRNSCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAY 654
            I ++  LSI  G+TVA VG SG GKST+I LI RFYD  SG +L+D   +  F    LR Q+GLV Q+ +LF++T++ NI  G+               +NAH+FI  LP GY+T VGERGV+LSGGQKQR++IAR  L NP IL+LDEATSALD ESE ++Q+AL+ +  +RTT++VAHRL+TI +AD I V++NG I E G+H  L+    GAY
Sbjct:  356 ILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEVAKV-ANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELI-AKQGAY 569          
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: Y1788_STAAS (Putative multidrug export ATP-binding/permease protein SAS1788 OS=Staphylococcus aureus (strain MSSA476) GN=SAS1788 PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.440e-52
Identity = 112/216 (51.85%), Postives = 148/216 (68.52%), Query Frame = 1
Query:    7 IFRNSCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAY 654
            I ++  LSI  G+TVA VG SG GKST+I LI RFYD  SG +L+D   +  F    LR Q+GLV Q+ +LF++T++ NI  G+               +NAH+FI  LP GY+T VGERGV+LSGGQKQR++IAR  L NP IL+LDEATSALD ESE ++Q+AL+ +  +RTT++VAHRL+TI +AD I V++NG I E G+H  L+    GAY
Sbjct:  356 ILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKM-ANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELI-AKQGAY 569          
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: Y1683_STAAN (Putative multidrug export ATP-binding/permease protein SA1683 OS=Staphylococcus aureus (strain N315) GN=SA1683 PE=1 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.440e-52
Identity = 112/216 (51.85%), Postives = 148/216 (68.52%), Query Frame = 1
Query:    7 IFRNSCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAY 654
            I ++  LSI  G+TVA VG SG GKST+I LI RFYD  SG +L+D   +  F    LR Q+GLV Q+ +LF++T++ NI  G+               +NAH+FI  LP GY+T VGERGV+LSGGQKQR++IAR  L NP IL+LDEATSALD ESE ++Q+AL+ +  +RTT++VAHRL+TI +AD I V++NG I E G+H  L+    GAY
Sbjct:  356 ILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKM-ANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELI-AKQGAY 569          
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: MSBA_RALME (Lipid A export ATP-binding/permease protein msbA OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=msbA PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.881e-52
Identity = 106/200 (53.00%), Postives = 145/200 (72.50%), Query Frame = 1
Query:   40 GKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAH--NFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALM 633
            G+ VALVG SGSGK+T++ L+ RF+DP  GH+LLD   + +F L+ LR+Q+  VSQ+ VLFN+T+  N+AYG                + A+  + +  LP G ETN+G+ G++LSGGQ+QR+AIARA+ K+  IL+LDEATSALD+ESER VQ ALE +MV RTT+V+AHRL+TI+NAD I V++ G +AEQGSH  L+
Sbjct:  377 GEVVALVGPSGSGKTTLVNLVPRFFDPTEGHILLDGQPIDRFALADLRRQIAFVSQDVVLFNDTVAANVAYGVHPREKIDMARVERALAAAYLTDVVKGLPEGLETNIGDNGMKLSGGQRQRLAIARAIYKDAPILILDEATSALDSESERQVQAALESLMVGRTTLVIAHRLSTIENADRIVVLEQGRVAEQGSHAELI 576          
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: MDR3_CAEEL (Multidrug resistance protein 3 OS=Caenorhabditis elegans GN=pgp-3 PE=2 SV=2)

HSP 1 Score: 205.297 bits (521), Expect = 4.189e-52
Identity = 107/203 (52.71%), Postives = 140/203 (68.97%), Query Frame = 1
Query:   25 LSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALM 633
            +S   G+TVALVG SG GKST I LIER+YD   G V +D+ ++    +  LR  + LV QEP LFN TIR NI YG +              +N H F+  LP GY+T+VG  G +LSGGQKQR+AIARA++++PKILLLDEATSALD ESE++VQ+AL++  + RT VV+AHRL+TI+NAD I V +NG   E+G+H  L+
Sbjct: 1052 MSANFGQTVALVGPSGCGKSTTIQLIERYYDALCGSVKIDDSDIRDLSVKHLRDNIALVGQEPTLFNLTIRENITYGLEN-ITQDQVEKAATLANIHTFVMGLPDGYDTSVGASGGRLSGGQKQRVAIARAIVRDPKILLLDEATSALDTESEKIVQEALDKARLGRTCVVIAHRLSTIQNADKIIVCRNGKAIEEGTHQTLL 1253          

HSP 2 Score: 197.978 bits (502), Expect = 6.688e-50
Identity = 105/216 (48.61%), Postives = 140/216 (64.81%), Query Frame = 1
Query:    7 IFRNSCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAY 654
            I +     +  G+TVALVG SG GKST I L+ RFY+  +G + LD I + ++ + WLR  +G+V QEP++F  T+  NI  G                +NAH FI  L   Y+T +G   VQLSGGQKQR+AIARA+++ P+ILLLDEATSALD ESER+VQ AL++    RTT+ +AHRL+TI+NA  I V   G+IAE+G+HD L+   DG Y
Sbjct:  393 ILKGVSFEVNPGETVALVGHSGCGKSTSIGLLMRFYNQCAGMIKLDGIPIQEYNIRWLRSTIGIVQQEPIIFVATVAENIRMGDVL-ITDQDIEEACKMANAHEFICKLSDRYDTVIGAGAVQLSGGQKQRVAIARAIVRKPQILLLDEATSALDTESERMVQTALDKASEGRTTLCIAHRLSTIRNASKILVFDQGLIAERGTHDELISKDDGIY 607          
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: MSBA_SACD2 (Lipid A export ATP-binding/permease protein msbA OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=msbA PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 7.146e-52
Identity = 106/202 (52.48%), Postives = 142/202 (70.30%), Query Frame = 1
Query:   28 SIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALM 633
            +I  G+TVALVG SGSGKST+++L+ RFYD   G + +D   +   +L  LR+ + LV+Q+ +LFN+TI  NIAYG +              +NAH+FI ALP+GY+T  GE G +LSGGQ+QRIAIARA+ KN  IL+LDEATSALD ESE+ +Q AL+ +   RTT+V+AHRL+TI+NAD I V+ NG I E G+H  L+
Sbjct:  371 AIEPGQTVALVGSSGSGKSTIVSLLLRFYDNQQGSITIDGTPIQSLELHNLREHIALVNQQTILFNDTIAANIAYGSEH-IDEARIQDAAKQANAHDFIMALPNGYQTPAGEDGSRLSGGQRQRIAIARALYKNAPILILDEATSALDNESEKQIQSALDELKQGRTTLVIAHRLSTIENADTILVMDNGRIVEAGNHQTLL 571          
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: MSBA_PSEPF (Lipid A export ATP-binding/permease protein msbA OS=Pseudomonas fluorescens (strain Pf0-1) GN=msbA PE=3 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 9.333e-52
Identity = 106/202 (52.48%), Postives = 142/202 (70.30%), Query Frame = 1
Query:   28 SIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALM 633
            S+  G+ VALVG SGSGKST+  LI RFY  D G +L+D +E+ ++KL  LR+ +  V+Q   LF++T+  NIAYG   G            + A +FI+ LP G +T VGE GV LSGGQ+QR+AIARA+LKN  +L+LDEATSALD ESER +Q AL++VM  RTT+V+AHRL+TI+ AD+I V+  G I E+G+HD L+
Sbjct:  377 SVEPGQMVALVGRSGSGKSTLANLIPRFYHHDKGEILIDGVEVEQYKLLNLRRHIAQVTQHVTLFSDTVANNIAYGDLAGAPREDIEKAARDAYAMDFIAQLPEGLDTQVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDQVMKGRTTLVIAHRLSTIEKADLILVMDQGRIVERGTHDDLL 578          
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: MSBA_PHOLL (Lipid A export ATP-binding/permease protein msbA OS=Photorhabdus luminescens subsp. laumondii GN=msbA PE=3 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 9.333e-52
Identity = 109/214 (50.93%), Postives = 150/214 (70.09%), Query Frame = 1
Query:   13 RNSCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAY 654
            +N  + IP+GK VALVG SGSGKST+  L+ RFYD + G++ LD  +L ++KLS LR Q+ LVSQ   LFN+T+  NIAY  +              + A +FI  L +G +T +GE GV LSGGQ+QRIAIARA+L++  +L+LDEATSALD ESER +Q AL+ +  NRT++V+AHRL+TI+NAD I VV++G I E+G H +L++  +G Y
Sbjct:  359 QNISMYIPAGKIVALVGRSGSGKSTIANLLTRFYDVNEGNIFLDGHDLREYKLSSLRGQVALVSQNVHLFNDTVANNIAYASENRYSREEIEKAAEMAYAMDFIRKLDNGLDTMIGENGVLLSGGQRQRIAIARALLRDSPVLILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIENADEILVVEDGHIVERGDHLSLLE-RNGVY 571          
BLAST of EY692445 vs. ExPASy Swiss-Prot
Match: MSBA_IDILO (Lipid A export ATP-binding/permease protein msbA OS=Idiomarina loihiensis GN=msbA PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 1.219e-51
Identity = 110/208 (52.88%), Postives = 139/208 (66.83%), Query Frame = 1
Query:   31 IPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGXXXXXXXXXXXXSNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAY 654
            +  GKTVALVG SGSGKST+  L+ RFYD + G +LLD   +  +KL  LR+Q  LVSQ   LFN+TI  NIAYG                +    F  ++P G +T VGE GV LSGGQ+QRIAIARA+L++  IL+LDEATSALD ESER +QDAL  +  NRT +V+AHRL+TI+NAD I V+ NG I E+G+H  L+   +GAY
Sbjct:  364 VDQGKTVALVGRSGSGKSTISNLLTRFYDVEQGSILLDGHNINDYKLKCLRRQFALVSQHVTLFNDTIANNIAYGASKDVSRENIIKAAEQAYVTEFTDSMPKGLDTMVGENGVMLSGGQRQRIAIARALLQDAPILILDEATSALDTESERHIQDALGTLRKNRTAIVIAHRLSTIENADEILVMDNGEIIERGTHQQLLD-QEGAY 570          
The following BLAST results are available for this feature:
BLAST of EY692445 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y1806_STAAW1.440e-5251.85Putative multidrug export ATP-binding/permease pro... [more]
Y1799_STAAB1.440e-5251.85Putative multidrug export ATP-binding/permease pro... [more]
Y1788_STAAS1.440e-5251.85Putative multidrug export ATP-binding/permease pro... [more]
Y1683_STAAN1.440e-5251.85Putative multidrug export ATP-binding/permease pro... [more]
MSBA_RALME1.881e-5253.00Lipid A export ATP-binding/permease protein msbA O... [more]
MDR3_CAEEL4.189e-5252.71Multidrug resistance protein 3 OS=Caenorhabditis e... [more]
MSBA_SACD27.146e-5252.48Lipid A export ATP-binding/permease protein msbA O... [more]
MSBA_PSEPF9.333e-5252.48Lipid A export ATP-binding/permease protein msbA O... [more]
MSBA_PHOLL9.333e-5250.93Lipid A export ATP-binding/permease protein msbA O... [more]
MSBA_IDILO1.219e-5152.88Lipid A export ATP-binding/permease protein msbA O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-071-F07-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692445 ID=EY692445; Name=EY692445; organism=Citrus sinensis; type=EST; length=944bp
TGTTCAATTTTTAGAAATTCATGCTTGAGCATCCCATCTGGAAAGACTGT
TGCTCTTGTTGGAGAGAGTGGTAGTGGAAAATCAACCGTCATTGCCCTTA
TAGAGAGATTCTATGATCCTGATTCTGGTCATGTACTTCTAGATAATATT
GAATTACCGAAGTTCAAACTAAGTTGGTTGAGGCAACAGATGGGTTTGGT
CAGCCAAGAGCCGGTACTCTTCAATGAAACCATCCGAACCAACATAGCCT
ATGGCAAACAAGGAGGAGCTACCGAAGAGGAGATCATTGCGGCTACAGAA
GCATCAAATGCACACAACTTCATAAGTGCATTGCCACATGGCTACGAGAC
CAATGTTGGGGAACGAGGAGTGCAGCTATCCGGTGGGCAGAAGCAGAGAA
TTGCCATAGCAAGAGCTGTATTAAAGAACCCAAAAATTCTTTTGCTTGAT
GAGGCAACAAGTGCACTGGATGCAGAATCAGAGCGTGTAGTACAAGATGC
ATTGGAGAGAGTGATGGTTAACAGGACAACTGTGGTTGTAGCTCACCGCC
TTACCACTATAAAAAATGCTGATATAATAGCTGTAGTGAAGAATGGTGTG
ATTGCAGAGCAGGGAAGCCATGATGCACTGATGAAAATCACTGATGGGGC
TTATGCTTCCTTGGTAGCTCTCCATGTGAGCTCATCATAAGGAGAAGCAG
AGTGCGTTACCAATAATTGAACACTTGACTTCATCTGTCCCGGGGCCCTC
ACCGTGGAAACTGAATTTTTTGTCAGCAGCAGTTTATTTTTGGCCCACCT
TTTTTACCTACCTTTAAAAAGTAGGAAACTATCTTTACCCTTTTCCCAAT
TTTCAAGAAAGGGAAATTTGAAAAAACTTTTGGAATTTTGGTATGAAATT
TTCCCTTTTAAAAAAATTTTTGAAAGCAATTTAACCCACGGGGA
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