EY692439

Overview
NameEY692439
Unique NameEY692439
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length570
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_BURCC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia cenocepacia (strain MC0-3) GN=metE PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.931e-19
Identity = 49/89 (55.06%), Postives = 60/89 (67.42%), Query Frame = 2
Query:    5 SRSDDTFMSVFREGVKYGALIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 271
            SRSD   +  F +  KY   IGPGVYDIHSP IP+ + I   + K    +    LWVNPDCGLKTR++ EV PAL+NMVAAAK+LR Q+
Sbjct:  676 SRSDMELLDAF-DTFKYPNEIGPGVYDIHSPNIPTQDHIVGLMRKAAERIPAERLWVNPDCGLKTRQWAEVIPALTNMVAAAKMLRNQV 763          
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_BRAJA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bradyrhizobium japonicum GN=metE PE=3 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 1.931e-19
Identity = 49/86 (56.98%), Postives = 61/86 (70.93%), Query Frame = 2
Query:    5 SRSDDTFMSVFREGVKYGALIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 262
            SRS    +  FR   +Y   IGPGVYDIHSPR+P T+E+ + I      L+ + LWVNPDCGLKTRK+ EV+PAL+NMVAAA+ LR
Sbjct:  689 SRSKMELLDAFRR-YEYPNQIGPGVYDIHSPRVPETDEMKELIVLARTRLQDSQLWVNPDCGLKTRKWEEVRPALANMVAAARELR 773          
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_SACD2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=metE PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.521e-19
Identity = 50/90 (55.56%), Postives = 60/90 (66.67%), Query Frame = 2
Query:    5 SRSDDTFMSVFREGVKYGALIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 274
            SRS+   +S F E   Y   IGPGVYDIHSP IP+TE++   I K    L    LW+NPDCGLKTRK+ +V PAL NMV AAK LR ++A
Sbjct:  677 SRSNMELLSAF-EQFNYPNDIGPGVYDIHSPNIPATEQVVGLIKKAAENLPLQRLWINPDCGLKTRKWEDVIPALENMVNAAKQLRAEVA 765          
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_DESRM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Desulfotomaculum reducens (strain MI-1) GN=metE PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.293e-19
Identity = 46/89 (51.69%), Postives = 64/89 (71.91%), Query Frame = 2
Query:    5 SRSDDTFMSVFREGVKYGALIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 271
            SRS +  ++VF     Y   IGPG+YDIHSPR+PS EE+ ++I  ++ VL  + LW+NPDCGLKTRK+ E++ +LSNMV AA+ +R  L
Sbjct:  671 SRSGNKLLTVFATR-GYKNEIGPGIYDIHSPRVPSVEELEEKIRNLMLVLPPSKLWINPDCGLKTRKWDEIRWSLSNMVKAAQHIRLGL 758          
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_ALHEH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=metE PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.293e-19
Identity = 49/93 (52.69%), Postives = 61/93 (65.59%), Query Frame = 2
Query:    5 SRSDDTFMSVFREGVKYGALIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASAK 283
            SRSD   + VF EG +Y   IGPGVYDIHSP  PS + +   + K    +    LWVNPDCGLKTR + EV+PAL NMVAAA++LR +   A+
Sbjct:  673 SRSDMELLEVF-EGFEYPNEIGPGVYDIHSPNTPSVDWMVRLMEKAARRIPVERLWVNPDCGLKTRAWAEVEPALQNMVAAAEILRERYGQAQ 764          
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_BURCH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia cenocepacia (strain HI2424) GN=metE PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.301e-19
Identity = 49/89 (55.06%), Postives = 59/89 (66.29%), Query Frame = 2
Query:    5 SRSDDTFMSVFREGVKYGALIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 271
            SRSD   +  F +  KY   IGPGVYDIHSP IP+ + I   + K    +    LWVNPDCGLKTR++ EV PAL+NMVAAAK LR Q+
Sbjct:  676 SRSDMELLDAF-DTFKYPNEIGPGVYDIHSPNIPTQDHIVGLMKKAAERIPAERLWVNPDCGLKTRQWAEVIPALTNMVAAAKTLRNQV 763          
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_BURCA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia cenocepacia (strain AU 1054) GN=metE PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.301e-19
Identity = 49/89 (55.06%), Postives = 59/89 (66.29%), Query Frame = 2
Query:    5 SRSDDTFMSVFREGVKYGALIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 271
            SRSD   +  F +  KY   IGPGVYDIHSP IP+ + I   + K    +    LWVNPDCGLKTR++ EV PAL+NMVAAAK LR Q+
Sbjct:  676 SRSDMELLDAF-DTFKYPNEIGPGVYDIHSPNIPTQDHIVGLMKKAAERIPAERLWVNPDCGLKTRQWAEVIPALTNMVAAAKTLRNQV 763          
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_HAHCH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Hahella chejuensis (strain KCTC 2396) GN=metE PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 5.617e-19
Identity = 49/92 (53.26%), Postives = 58/92 (63.04%), Query Frame = 2
Query:    5 SRSDDTFMSVFREGVKYGALIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASA 280
            SRSD   +  F +  KY   IGPGVYDIHSP IPS   I   + K    +  + LWVNPDCGLKTR + EV+PAL NMV AAK LR  + +A
Sbjct:  671 SRSDMELLDAF-DNFKYPNEIGPGVYDIHSPNIPSETHIVQLMRKAAERIPAHRLWVNPDCGLKTRNWEEVRPALQNMVNAAKQLRADVVAA 761          
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_BURCM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=metE PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 5.617e-19
Identity = 48/89 (53.93%), Postives = 59/89 (66.29%), Query Frame = 2
Query:    5 SRSDDTFMSVFREGVKYGALIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 271
            SRSD   +  F +  +Y   IGPGVYDIHSP IP+ + I   + K    +    LWVNPDCGLKTR++ EV PAL+NMVAAAK LR Q+
Sbjct:  676 SRSDMELLDAF-DSFRYPNEIGPGVYDIHSPNIPTQDHIVGLMKKAAERIPAERLWVNPDCGLKTRQWAEVIPALTNMVAAAKTLRNQV 763          
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_BURCJ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=metE PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 5.617e-19
Identity = 49/89 (55.06%), Postives = 59/89 (66.29%), Query Frame = 2
Query:    5 SRSDDTFMSVFREGVKYGALIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 271
            SRSD   +  F +  KY   IGPGVYDIHSP IP+ + I   + K    +    LWVNPDCGLKTR++ EV PAL+NMVAAAK LR Q+
Sbjct:  676 SRSDMELLDAF-DDFKYPNEIGPGVYDIHSPNIPTQDHIVGLMRKAAERIPAERLWVNPDCGLKTRQWGEVIPALTNMVAAAKTLRNQV 763          
The following BLAST results are available for this feature:
BLAST of EY692439 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
METE_BURCC1.931e-1955.065-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BRAJA1.931e-1956.985-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SACD22.521e-1955.565-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_DESRM3.293e-1951.695-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ALHEH3.293e-1952.695-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURCH4.301e-1955.065-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURCA4.301e-1955.065-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_HAHCH5.617e-1953.265-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURCM5.617e-1953.935-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURCJ5.617e-1955.065-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-071-E11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692439 ID=EY692439; Name=EY692439; organism=Citrus sinensis; type=EST; length=570bp
GAACTCTCGTTCTGATGACACGTTTATGTCTGTCTTCCGTGAGGGAGTCA
AGTATGGTGCTCTTATTGGCCCTGGTGTGTATGACATCCACTCTCCAAGA
ATACCATCAACTGAAGAAATTGCTGACAGAATCAACAAGATGCTTGCTGT
GCTAGAAACCAACATTTTGTGGGTTAACCCTGACTGTGGTCTTAAGACTC
GCAAGTACACTGAGGTGAAGCCAGCCCTCTCAAACATGGTCGCTGCTGCC
AAGCTACTCCGCACCCAGCTTGCCAGTGCCAAGTGAGTGGTTCTGGAGAT
TGGAGGGATACTTCCTGAGCCATTGATTTTTTTTTTTTTTTCACTTTAAA
CAAAGAAAGAAAATTCCTGTCTTATTACCTATTCGAATAACTGTGGGTCG
TGATGTGATGAAAATTTTCCGTATGCATATTATGCACTATTGAGCAATTG
GCTTCTATTTTTCTTTGCTTGTATTTTCCGTTTTTAAAGGCCCCGGCTTG
CTATCAGTGGCCGTAAATCGATGGAATACCTTTACTGGTTTGTGCATTAA
AAAAAAAAAAAAAAAAAAAA
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