EY692439

Overview
NameEY692439
Unique NameEY692439
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length570
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_BORA1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bordetella avium (strain 197N) GN=metE PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.441e-14
Identity = 42/86 (48.84%), Postives = 52/86 (60.47%), Query Frame = 2
Query:    5 SRSDDTFMSVFREGVKYGALIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 262
            SRS+   +  F E   Y   IGPGVYDIHSP +P  + +   + K  A L    LWVNPDCGLKTR + E + AL +MV AA+ LR
Sbjct:  678 SRSNMELLKAF-EDFHYPNDIGPGVYDIHSPNVPDVDWMVGLMQKAGANLSKERLWVNPDCGLKTRAWPETEAALISMVQAARTLR 762          
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_STRTD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=metE PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 7.106e-14
Identity = 35/69 (50.72%), Postives = 47/69 (68.12%), Query Frame = 2
Query:   65 IGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 271
            +GPGVYDIHSPR+P   EI   I  +LA + ++ +W+NPDCGLKTR   E K +L+ ++ AAK  R  L
Sbjct:  681 VGPGVYDIHSPRVPQDGEIDHTIEAILAKVPSSKVWINPDCGLKTRGIKETKESLTKLLEAAKAARKNL 749          
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_STRSV (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus sanguinis (strain SK36) GN=metE PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 7.106e-14
Identity = 36/69 (52.17%), Postives = 46/69 (66.67%), Query Frame = 2
Query:   65 IGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 271
            +GPGVYDIHSPR+P+  EI   I  +LA + +  +W+NPDCGLKTR   E K +L  +V AAK  R  L
Sbjct:  681 VGPGVYDIHSPRVPNEGEIDHTIEAILAKVPSKKVWINPDCGLKTRGIPETKASLVRLVEAAKAARQHL 749          
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_STRGC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=metE PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 7.106e-14
Identity = 36/69 (52.17%), Postives = 46/69 (66.67%), Query Frame = 2
Query:   65 IGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 271
            +GPGVYDIHSPR+P+  EI   I  +LA + +  +W+NPDCGLKTR   E K +L  +V AAK  R  L
Sbjct:  681 VGPGVYDIHSPRVPNEGEIDHTIEAILAKVPSKKVWINPDCGLKTRGIPETKASLVRLVEAAKAARQHL 749          
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_CORGL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Corynebacterium glutamicum GN=metE PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.583e-13
Identity = 38/92 (41.30%), Postives = 59/92 (64.13%), Query Frame = 2
Query:    5 SRSDDTFMSVFRE-GVKYGALIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLAS 277
            +RSD   ++  +  G + G  +GPGV+DIHSPR+PS +E+   +   L  ++   LWVNPDCGLKTR + EV+ +L  +V +AK  R ++ +
Sbjct:  654 ARSDMQVLAALKSSGFELG--VGPGVWDIHSPRVPSAQEVDGLLEAALQSVDPRQLWVNPDCGLKTRGWPEVEASLKVLVESAKQAREKIGA 743          
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_CORGB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Corynebacterium glutamicum (strain R) GN=metE PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.583e-13
Identity = 38/92 (41.30%), Postives = 59/92 (64.13%), Query Frame = 2
Query:    5 SRSDDTFMSVFRE-GVKYGALIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLAS 277
            +RSD   ++  +  G + G  +GPGV+DIHSPR+PS +E+   +   L  ++   LWVNPDCGLKTR + EV+ +L  +V +AK  R ++ +
Sbjct:  654 ARSDMQVLAALKSSGFELG--VGPGVWDIHSPRVPSAQEVDGLLEAALQSVDPRQLWVNPDCGLKTRGWPEVEASLKVLVESAKQAREKIGA 743          
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_COREF (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Corynebacterium efficiens GN=metE PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.583e-13
Identity = 34/69 (49.28%), Postives = 47/69 (68.12%), Query Frame = 2
Query:   65 IGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 271
            +GPGV+DIHSPR+P   E++  ++  L  ++   LWVNPDCGLKTR + E   +L  +VAAA+  RT L
Sbjct:  678 VGPGVWDIHSPRVPELAEVSQLLSSALESVDPRRLWVNPDCGLKTRGWEETTASLKVLVAAAEQARTDL 746          
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_YEAST (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Saccharomyces cerevisiae GN=MET6 PE=1 SV=4)

HSP 1 Score: 75.0998 bits (183), Expect = 2.700e-13
Identity = 40/88 (45.45%), Postives = 53/88 (60.23%), Query Frame = 2
Query:    5 SRSDDTFMSVFREGVKYGALIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 268
            S+ DD   +   E   Y   IG G++DIHSPRIPS +E   +I+ +L        WVNPDCGLKTR + E + +L++MV AAK  R Q
Sbjct:  679 SKKDDA--NYIAEFKNYPNHIGLGLFDIHSPRIPSKDEFIAKISTILKSYPAEKFWVNPDCGLKTRGWEETRLSLTHMVEAAKYFREQ 764          
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_PARL1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=metE PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 6.016e-13
Identity = 35/71 (49.30%), Postives = 46/71 (64.79%), Query Frame = 2
Query:   65 IGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLAS 277
            IGPGVYDIHSPR+P+  E+   +      L +  +WVNPDCGLKTR + E + AL  MV AA+ LR  + +
Sbjct:  693 IGPGVYDIHSPRVPARGEMLSLLRLAAERLPSERIWVNPDCGLKTRGWPETEAALVEMVEAARELRNAIGA 763          
The following BLAST results are available for this feature:
BLAST of EY692439 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
METE_BORA15.441e-1448.845-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRTD7.106e-1450.725-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRSV7.106e-1452.175-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRGC7.106e-1452.175-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CORGL1.583e-1341.305-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CORGB1.583e-1341.305-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_COREF1.583e-1349.285-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YEAST2.700e-1345.455-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PARL16.016e-1349.305-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-071-E11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692439 ID=EY692439; Name=EY692439; organism=Citrus sinensis; type=EST; length=570bp
GAACTCTCGTTCTGATGACACGTTTATGTCTGTCTTCCGTGAGGGAGTCA
AGTATGGTGCTCTTATTGGCCCTGGTGTGTATGACATCCACTCTCCAAGA
ATACCATCAACTGAAGAAATTGCTGACAGAATCAACAAGATGCTTGCTGT
GCTAGAAACCAACATTTTGTGGGTTAACCCTGACTGTGGTCTTAAGACTC
GCAAGTACACTGAGGTGAAGCCAGCCCTCTCAAACATGGTCGCTGCTGCC
AAGCTACTCCGCACCCAGCTTGCCAGTGCCAAGTGAGTGGTTCTGGAGAT
TGGAGGGATACTTCCTGAGCCATTGATTTTTTTTTTTTTTTCACTTTAAA
CAAAGAAAGAAAATTCCTGTCTTATTACCTATTCGAATAACTGTGGGTCG
TGATGTGATGAAAATTTTCCGTATGCATATTATGCACTATTGAGCAATTG
GCTTCTATTTTTCTTTGCTTGTATTTTCCGTTTTTAAAGGCCCCGGCTTG
CTATCAGTGGCCGTAAATCGATGGAATACCTTTACTGGTTTGTGCATTAA
AAAAAAAAAAAAAAAAAAAA
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