EY692439

Overview
NameEY692439
Unique NameEY692439
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length570
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_BURP8 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=metE PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.360e-17
Identity = 46/86 (53.49%), Postives = 53/86 (61.63%), Query Frame = 2
Query:    5 SRSDDTFMSVFREGVKYGALIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 262
            SRSD   +  F +   Y   IGPGVYDIHSP IP    + D + K    +    LWVNPDCGLKTR + EV PAL NMVAAA+ LR
Sbjct:  676 SRSDMELLDAF-DDFHYPNQIGPGVYDIHSPNIPDQAHVVDLMKKAAERIPAERLWVNPDCGLKTRAWEEVIPALKNMVAAARTLR 760          
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_VIBFM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio fischeri (strain MJ11) GN=metE PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.082e-17
Identity = 49/91 (53.85%), Postives = 55/91 (60.44%), Query Frame = 2
Query:    5 SRSDDTFMSVFREGVKYGALIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLAS 277
            SRS+   +  F E   Y   IGPGVYDIHSP IPS E I D I    A +    LWVNPDCGLKTR + E + AL NMV AAK LR +  S
Sbjct:  682 SRSNMELLKAF-EDFNYPNEIGPGVYDIHSPNIPSQEWIVDLIETAAARVPVERLWVNPDCGLKTRNWKETEAALENMVKAAKALRKKWQS 771          
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_VIBF1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=metE PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.082e-17
Identity = 49/91 (53.85%), Postives = 55/91 (60.44%), Query Frame = 2
Query:    5 SRSDDTFMSVFREGVKYGALIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLAS 277
            SRS+   +  F E   Y   IGPGVYDIHSP IPS E I D I    A +    LWVNPDCGLKTR + E + AL NMV AAK LR +  S
Sbjct:  682 SRSNMELLKAF-EDFNYPNEIGPGVYDIHSPNIPSQEWIVDLIETAAARVPVERLWVNPDCGLKTRNWKETEAALENMVKAAKALRKKWQS 771          
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_THEYD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=metE PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.082e-17
Identity = 42/86 (48.84%), Postives = 59/86 (68.60%), Query Frame = 2
Query:    5 SRSDDTFMSVFREGVKYGALIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 262
            SRS    +S F E  +Y   IG GVYDIHSPR+PS EE+ + I + +++++ ++ W+NPDCGLKTR + E   +L NMV AAK +R
Sbjct:  657 SRSKGEILSAF-ENFRYDHGIGLGVYDIHSPRVPSVEEMIEIIERSVSLIDKSLFWINPDCGLKTRGWQETVASLKNMVLAAKAMR 741          
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_MYCLE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium leprae GN=metE PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.082e-17
Identity = 42/72 (58.33%), Postives = 50/72 (69.44%), Query Frame = 2
Query:   47 VKYGALIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 262
            V +   IGPGVYDIHSPR+PST+EIA  +   L  +    LWVNPDCGLKTR   EV  +L NMVAAA+ +R
Sbjct:  686 VGFANSIGPGVYDIHSPRVPSTDEIAKSLRAALKAIPMQRLWVNPDCGLKTRSVDEVSASLQNMVAAARQVR 757          
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_BUCBP (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=metE PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.082e-17
Identity = 47/89 (52.81%), Postives = 57/89 (64.04%), Query Frame = 2
Query:    5 SRSDDTFMSVFREGVKYGALIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 271
            SRSD   +  F+E  KY   IGPGVYDIHSP IPS E I   + + +  +    LWVNPDCGLKTR + E   +L NMV AAK+LR +L
Sbjct:  669 SRSDMELLEFFKE-FKYPNDIGPGVYDIHSPNIPSIEWIMTLLRQAMHYIPVKRLWVNPDCGLKTRTWDETYYSLENMVRAAKILRKKL 756          
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_PSESM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas syringae pv. tomato GN=metE PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.026e-17
Identity = 47/86 (54.65%), Postives = 54/86 (62.79%), Query Frame = 2
Query:    5 SRSDDTFMSVFREGVKYGALIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 262
            SRSD   +  F E   Y   IGPGVYDIHSPR+P T E+   I K    +    LWVNPDCGLKTR + E + AL NMVAAA+ LR
Sbjct:  681 SRSDMELLDAF-EAFDYPNDIGPGVYDIHSPRVPETAEMVSLIAKAARRIPAERLWVNPDCGLKTRGWPETEAALINMVAAARQLR 765          
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_MARAV (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=metE PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.026e-17
Identity = 46/87 (52.87%), Postives = 55/87 (63.22%), Query Frame = 2
Query:    5 SRSDDTFMSVFREGVKYGALIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRT 265
            SRSD   +  FR   +Y   IGPGVYDIHSP IP  E I + +      +    LW+NPDCGLKTRK+ EV PAL  MVAAA+ LR+
Sbjct:  671 SRSDMELLDAFRS-FEYPNDIGPGVYDIHSPNIPDKEHIINLMTLAAERIPAERLWINPDCGLKTRKWEEVTPALETMVAAARELRS 756          
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_HERA2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=metE PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.026e-17
Identity = 40/75 (53.33%), Postives = 51/75 (68.00%), Query Frame = 2
Query:   50 KYGALIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 274
            +Y   IGPGVYDIHSP IP+ E++  R+ ++L  L    LW+NPDCGLKTR Y EV  AL  MV A K +R Q++
Sbjct:  674 RYTQQIGPGVYDIHSPNIPTVEQLVARMRQLLNYLPAEQLWINPDCGLKTRTYAEVAAALQAMVTATKQVRNQIS 748          
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_CAMJD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=metE PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.026e-17
Identity = 43/89 (48.31%), Postives = 59/89 (66.29%), Query Frame = 2
Query:    5 SRSDDTFMSVFREGVKYGALIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 271
            SRS+ + +   +  V +   +GPGVYDIHSPR+PS EE++  I K+L  L    +W+NPDCGLKTR Y EV  +L N+V A + +R QL
Sbjct:  667 SRSNLSLLDTLK-AVHFKTEVGPGVYDIHSPRVPSVEELSLTIEKILNKLPKEQIWINPDCGLKTRAYEEVIASLKNLVTATQKIRKQL 754          
The following BLAST results are available for this feature:
BLAST of EY692439 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
METE_BURP82.360e-1753.495-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBFM3.082e-1753.855-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBF13.082e-1753.855-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_THEYD3.082e-1748.845-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCLE3.082e-1758.335-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BUCBP3.082e-1752.815-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSESM4.026e-1754.655-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MARAV4.026e-1752.875-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_HERA24.026e-1753.335-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CAMJD4.026e-1748.315-methyltetrahydropteroyltriglutamate--homocystein... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C2-003-071-E11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692439 ID=EY692439; Name=EY692439; organism=Citrus sinensis; type=EST; length=570bp
GAACTCTCGTTCTGATGACACGTTTATGTCTGTCTTCCGTGAGGGAGTCA
AGTATGGTGCTCTTATTGGCCCTGGTGTGTATGACATCCACTCTCCAAGA
ATACCATCAACTGAAGAAATTGCTGACAGAATCAACAAGATGCTTGCTGT
GCTAGAAACCAACATTTTGTGGGTTAACCCTGACTGTGGTCTTAAGACTC
GCAAGTACACTGAGGTGAAGCCAGCCCTCTCAAACATGGTCGCTGCTGCC
AAGCTACTCCGCACCCAGCTTGCCAGTGCCAAGTGAGTGGTTCTGGAGAT
TGGAGGGATACTTCCTGAGCCATTGATTTTTTTTTTTTTTTCACTTTAAA
CAAAGAAAGAAAATTCCTGTCTTATTACCTATTCGAATAACTGTGGGTCG
TGATGTGATGAAAATTTTCCGTATGCATATTATGCACTATTGAGCAATTG
GCTTCTATTTTTCTTTGCTTGTATTTTCCGTTTTTAAAGGCCCCGGCTTG
CTATCAGTGGCCGTAAATCGATGGAATACCTTTACTGGTTTGTGCATTAA
AAAAAAAAAAAAAAAAAAAA
back to top