EY692439

Overview
NameEY692439
Unique NameEY692439
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length570
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_STAES (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=metE PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.258e-17
Identity = 47/91 (51.65%), Postives = 58/91 (63.74%), Query Frame = 2
Query:    5 SRSDDTFMSVFREGVKYGALIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLAS 277
            SRS    +  F E + Y   IG GVYDIHSPRIP+ EEI   IN+ L  ++ ++ WVNPDCGLKTRK  EVK AL+ +V A K  R +  S
Sbjct:  656 SRSHGDLIQDF-EDINYDLGIGLGVYDIHSPRIPTEEEITTAINRSLQQIDRSLFWVNPDCGLKTRKENEVKDALTVLVNAVKKKRQESES 745          
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_STAEQ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=metE PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.258e-17
Identity = 47/91 (51.65%), Postives = 58/91 (63.74%), Query Frame = 2
Query:    5 SRSDDTFMSVFREGVKYGALIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLAS 277
            SRS    +  F E + Y   IG GVYDIHSPRIP+ EEI   IN+ L  ++ ++ WVNPDCGLKTRK  EVK AL+ +V A K  R +  S
Sbjct:  656 SRSHGDLIQDF-EDINYDLGIGLGVYDIHSPRIPTEEEITTAINRSLQQIDRSLFWVNPDCGLKTRKENEVKDALTVLVNAVKKKRQESES 745          
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_PSEF5 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=metE PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.258e-17
Identity = 45/90 (50.00%), Postives = 57/90 (63.33%), Query Frame = 2
Query:    5 SRSDDTFMSVFREGVKYGALIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 274
            SRSD   +  F+    Y   IGPGVYDIHSPR+P   E+A+ + K    +    LWVNPDCGLKTR + E + AL +MV AA+ LR +LA
Sbjct:  674 SRSDMELLDAFK-AFAYPNEIGPGVYDIHSPRVPDASEMANLLRKAAQRIPAERLWVNPDCGLKTRGWPETEAALVHMVTAARQLRKELA 762          
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_PSEE4 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas entomophila (strain L48) GN=metE PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.258e-17
Identity = 46/86 (53.49%), Postives = 55/86 (63.95%), Query Frame = 2
Query:    5 SRSDDTFMSVFREGVKYGALIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 262
            SRSD   +  F E   Y   IGPGVYDIHSPR+P+ EE+   + K    +    LWVNPDCGLKTR + E + AL NMVAAA+ LR
Sbjct:  675 SRSDMELLEAF-ERFDYPNEIGPGVYDIHSPRVPTKEEMVKLLRKAAQRIPAERLWVNPDCGLKTRAWPETEAALVNMVAAARELR 759          
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_HAES2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Haemophilus somnus (strain 2336) GN=metE PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.258e-17
Identity = 46/90 (51.11%), Postives = 58/90 (64.44%), Query Frame = 2
Query:    5 SRSDDTFMSVFREGVKYGALIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 274
            SRSD   ++ F +  KY   IGPGVYDIHSPR+P+ EEI   + K L V+    LWVNPDCGLKTR ++E    L  M++  K LR +LA
Sbjct:  669 SRSDMELLTAFGD-FKYPNDIGPGVYDIHSPRVPTAEEIEHLLRKALNVVPKERLWVNPDCGLKTRGWSETIAQLEVMMSVTKKLRAELA 757          
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_HAES1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Haemophilus somnus (strain 129Pt) GN=metE PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.258e-17
Identity = 46/90 (51.11%), Postives = 58/90 (64.44%), Query Frame = 2
Query:    5 SRSDDTFMSVFREGVKYGALIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 274
            SRSD   ++ F +  KY   IGPGVYDIHSPR+P+ EEI   + K L V+    LWVNPDCGLKTR ++E    L  M++  K LR +LA
Sbjct:  669 SRSDMELLTAFGD-FKYPNDIGPGVYDIHSPRVPTAEEIEHLLRKALNVVPKERLWVNPDCGLKTRGWSETIAQLEVMMSVTKKLRAELA 757          
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_DESVH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=metE PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.258e-17
Identity = 45/89 (50.56%), Postives = 60/89 (67.42%), Query Frame = 2
Query:    5 SRSDDTFMSVFREGVKYGALIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 271
            SRS    + VF     Y   +GPGVYDIHSPR+PS +E+   + +  AVL  + LWVNPDCGLKTR++ E + AL+NMV AA+ +R +L
Sbjct:  696 SRSRMELLDVFATH-GYPNEVGPGVYDIHSPRVPSVDEMEALLLRAAAVLPVDRLWVNPDCGLKTREWPETRAALANMVEAARRVRARL 783          
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_BLOFL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Blochmannia floridanus GN=metE PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.258e-17
Identity = 42/87 (48.28%), Postives = 57/87 (65.52%), Query Frame = 2
Query:    2 NSRSDDTFMSVFREGVKYGALIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 262
            +SRSD   +   +   K    IGPG+YDIHS   PS  EI D++ K+L  +  + LW+NPDCGLKTR + E++ +L+NMV AAK LR
Sbjct:  676 SSRSDLQLLQFIKTAGKKLNEIGPGIYDIHSIHQPSINEIMDKLKKLLQYIPKDRLWINPDCGLKTRSWNEIRESLNNMVIAAKTLR 762          
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_BIFLI (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / NCTC 11817 / S12) GN=metE PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.258e-17
Identity = 43/89 (48.31%), Postives = 59/89 (66.29%), Query Frame = 2
Query:    5 SRSDDTFMSVFREGVKYGALIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 271
            SR D   +    +  ++    GPGVYDIHSPRIPS +EI DRI ++L  ++   +W+NPDCGLKTR   E  P+L ++VAAAK +R +L
Sbjct:  678 SRGDLVVLDAIHDA-RFETEAGPGVYDIHSPRIPSEKEIEDRIYEILDKIDVKKVWINPDCGLKTRGNDETWPSLEHLVAAAKAVRARL 765          
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_VIBCH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio cholerae GN=metE PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 6.867e-17
Identity = 46/88 (52.27%), Postives = 55/88 (62.50%), Query Frame = 2
Query:    5 SRSDDTFMSVFREGVKYGALIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 268
            SRS+   +  F E   Y   IGPGVYDIHSP IP+   I D + K    +    LWVNPDCGLKTR + EV+ AL+NMV AAK LR +
Sbjct:  672 SRSNMELLKAFEE-FNYPNEIGPGVYDIHSPNIPAQAWIEDLLRKAAEKIPAQRLWVNPDCGLKTRNWPEVEAALTNMVNAAKALRAE 758          
The following BLAST results are available for this feature:
BLAST of EY692439 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
METE_STAES5.258e-1751.655-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAEQ5.258e-1751.655-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEF55.258e-1750.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEE45.258e-1753.495-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_HAES25.258e-1751.115-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_HAES15.258e-1751.115-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_DESVH5.258e-1750.565-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BLOFL5.258e-1748.285-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BIFLI5.258e-1748.315-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBCH6.867e-1752.275-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-071-E11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692439 ID=EY692439; Name=EY692439; organism=Citrus sinensis; type=EST; length=570bp
GAACTCTCGTTCTGATGACACGTTTATGTCTGTCTTCCGTGAGGGAGTCA
AGTATGGTGCTCTTATTGGCCCTGGTGTGTATGACATCCACTCTCCAAGA
ATACCATCAACTGAAGAAATTGCTGACAGAATCAACAAGATGCTTGCTGT
GCTAGAAACCAACATTTTGTGGGTTAACCCTGACTGTGGTCTTAAGACTC
GCAAGTACACTGAGGTGAAGCCAGCCCTCTCAAACATGGTCGCTGCTGCC
AAGCTACTCCGCACCCAGCTTGCCAGTGCCAAGTGAGTGGTTCTGGAGAT
TGGAGGGATACTTCCTGAGCCATTGATTTTTTTTTTTTTTTCACTTTAAA
CAAAGAAAGAAAATTCCTGTCTTATTACCTATTCGAATAACTGTGGGTCG
TGATGTGATGAAAATTTTCCGTATGCATATTATGCACTATTGAGCAATTG
GCTTCTATTTTTCTTTGCTTGTATTTTCCGTTTTTAAAGGCCCCGGCTTG
CTATCAGTGGCCGTAAATCGATGGAATACCTTTACTGGTTTGTGCATTAA
AAAAAAAAAAAAAAAAAAAA
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