EY692438

Overview
NameEY692438
Unique NameEY692438
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length971
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692438 vs. ExPASy Swiss-Prot
Match: ATPG_MESSB (ATP synthase gamma chain OS=Mesorhizobium sp. (strain BNC1) GN=atpG PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.495e-25
Identity = 69/145 (47.59%), Postives = 92/145 (63.45%), Query Frame = 1
Query:  121 ADDILKNV-------EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 534
            AD I K V       EFD   +IYS+F SV+S +PT   ++   + + E ES G + E   YE + G     IL +L     +  +F A+LENA  E GA+M+AMD+++RNAGEM+++LT+TYNR RQA IT ELIEIISGA AL
Sbjct:  153 ADAIAKKVIGLFEAGEFDVCTLIYSRFKSVISQIPTEQQIIPAAVPQAEGESTGAIYE---YEPDAGA----ILADLIPRNIAVQIFRALLENAAGEMGAKMTAMDNATRNAGEMINKLTITYNRQRQAQITKELIEIISGAEAL 290          
BLAST of EY692438 vs. ExPASy Swiss-Prot
Match: ATPG_METNO (ATP synthase gamma chain OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=atpG PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.565e-25
Identity = 74/179 (41.34%), Postives = 103/179 (57.54%), Query Frame = 1
Query:   10 LGRAPKAILVRDSKKDIALIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDS-YEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 534
            +G+    IL R+ +  I  +I       L +     + +++L   E   FD   + YS+F SV++ +PT     + +++  E     +  + D+ YE E  E  GEIL  L     +  +  A+LENA SEQGARMSAMDS++RNAGEM+ + TL YNRTRQA IT ELIEIISGA AL
Sbjct:  121 VGKKGYDILRREFRDQIVELIELRGVRQLGFENAEAVTENLLNRFEAGEFDIATLFYSRFRSVIAQVPT-----AQQIIPAEISPASESAQTDAAYEYEPEE--GEILAALLPKNLTVQILRALLENAASEQGARMSAMDSATRNAGEMIKKQTLVYNRTRQAMITKELIEIISGAEAL 292          
BLAST of EY692438 vs. ExPASy Swiss-Prot
Match: ATPG_SILPO (ATP synthase gamma chain OS=Silicibacter pomeroyi GN=atpG PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.017e-24
Identity = 71/150 (47.33%), Postives = 94/150 (62.67%), Query Frame = 1
Query:   94 LNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 534
            L Y     +A D+L      EFD   I Y+KF +VV+ LPT   ++ P   E E ES     E+  ++ E  E    IL +L     +  +F+A+LEN  SEQGARMSAMD+++RNAGEM+D+LT+ +NR+RQA IT ELIEIISGA AL
Sbjct:  149 LGYANAQDIARDVLGRFDAGEFDVATIFYAKFQNVVTQLPTAQQII-PAAFEAEGESD----EVALFDYEPSEEA--ILADLLPRGVATQIFSALLENGASEQGARMSAMDNATRNAGEMIDKLTIEFNRSRQAVITNELIEIISGAEAL 291          
BLAST of EY692438 vs. ExPASy Swiss-Prot
Match: ATPG_RHIME (ATP synthase gamma chain OS=Rhizobium meliloti GN=atpG PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.735e-24
Identity = 64/130 (49.23%), Postives = 81/130 (62.31%), Query Frame = 1
Query:  145 EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 534
            EFD   + YS+F SV+S +PT   ++     E  A  G     +  YE E G     IL +L     S  +F A+LEN   E GA+MSAMD+++RNAGEM+D+LTL+YNR RQA IT ELIEIISGA AL
Sbjct:  169 EFDVCTLFYSEFKSVISQIPTAQQLIPASAGEVAAAEGEGASAIYEYEPEAGA----ILSDLIPRNISVQIFRALLENVAGEMGAKMSAMDNATRNAGEMIDKLTLSYNRQRQAQITKELIEIISGAEAL 294          
BLAST of EY692438 vs. ExPASy Swiss-Prot
Match: ATPG_ACICJ (ATP synthase gamma chain OS=Acidiphilium cryptum (strain JF-5) GN=atpG PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.735e-24
Identity = 66/178 (37.08%), Postives = 106/178 (59.55%), Query Frame = 1
Query:   10 LGRAPKAILVRDSKKDIALIITELQKNPLNYTQVSVLADDIL---KNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 534
            +GR  +    RD ++ I      + K  + +     +A+ I+    + +FD   +++++F SV+S +P+   ++     +   ++ G       YEIE  +  G +L  L     +  +++A+LE+A  EQGARM+AMD+++RNAGEM++RLTL YNRTRQA+IT ELIEIISGA AL
Sbjct:  121 VGRKGRDFFRRDMREKIIGEANFVGKKTIEFADAEAIANQIIAAFNDGKFDVCTLMFNRFVSVMSQVPSETPLIPASAGQAANDNAGSDQPAGDYEIEPDD--GTLLDRLLPRNLAVQIYSALLESAAGEQGARMTAMDNATRNAGEMINRLTLNYNRTRQANITKELIEIISGAEAL 296          
BLAST of EY692438 vs. ExPASy Swiss-Prot
Match: ATPG_ROSDO (ATP synthase gamma chain OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=atpG PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.266e-24
Identity = 67/158 (42.41%), Postives = 98/158 (62.03%), Query Frame = 1
Query:   70 ITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 534
            +TE+++  ++Y     +A D+L      EFD   I Y+KF +VVS +PT   ++  +  ++E E    L + +  E         IL +L     +  +F+A+LEN  SEQGARMSAMD+++RNAGEM++ LT+ +NR+RQA IT ELIEIISGA AL
Sbjct:  143 LTEIKR--VSYVDAQGIAKDVLNRFDVGEFDVATIFYAKFVNVVSQIPTAQQIIPAKFEQQEGEEASTLFDYEPDE-------EAILADLLPRGVATQIFSALLENGASEQGARMSAMDNATRNAGEMIENLTIEFNRSRQAVITNELIEIISGAEAL 291          
BLAST of EY692438 vs. ExPASy Swiss-Prot
Match: ATPG_HUMAN (ATP synthase subunit gamma, mitochondrial OS=Homo sapiens GN=ATP5C1 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.266e-24
Identity = 68/177 (38.42%), Postives = 106/177 (59.89%), Query Frame = 1
Query:   10 LGRAPKAILVRDSKKDIALIITELQKNPLNYTQVSVLADDILKN-VEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALE 537
            +G   + IL R       +   E+ + P  +   SV+A ++L +  EFD   II++KF SV+S+      + S   V   A+S     ++D+          ++LQN  E+  + +++ ++ E+  SEQ ARM+AMD++S+NA EM+D+LTLT+NRTRQA IT ELIEIISGA+AL+
Sbjct:  133 IGDKIRGILYRTHSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSIIFNKFRSVISYKTEEKPIFSLNTVA-SADSMSIYDDIDA----------DVLQNYQEYNLANIIYYSLKESTTSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298          
BLAST of EY692438 vs. ExPASy Swiss-Prot
Match: ATPG_ZYMMO (ATP synthase gamma chain OS=Zymomonas mobilis GN=atpG PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.959e-24
Identity = 60/154 (38.96%), Postives = 94/154 (61.04%), Query Frame = 1
Query:   82 QKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 534
            + +P+ +     +A D+++     EFD   + +S +HSV+S +PT   ++       + ++     +  S  IE    +  IL  L     +  ++ A+LENA SEQG+RMSAM++S+RNAGEM+ +L++ YNR RQA+ITTEL+EIISGA AL
Sbjct:  145 ETSPVTFENAQKIAQDLIQRFNAGEFDVAHLFFSHYHSVLSQVPTETQIIPAAPEGDDTKNQAAANDASSGAIEFEPDEETILSTLLPRSIAVAIYQAMLENATSEQGSRMSAMENSTRNAGEMISKLSIQYNRLRQAAITTELVEIISGAEAL 298          
BLAST of EY692438 vs. ExPASy Swiss-Prot
Match: ATPG_MACFA (ATP synthase subunit gamma, mitochondrial OS=Macaca fascicularis GN=ATP5C1 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.959e-24
Identity = 66/177 (37.29%), Postives = 107/177 (60.45%), Query Frame = 1
Query:   10 LGRAPKAILVRDSKKDIALIITELQKNPLNYTQVSVLADDILKN-VEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALE 537
            +G   + IL R       +   E+ + P  +   SV+A ++L +  EFD   +I+++F SV+S+      + S   +   AES     ++D+          ++LQN  E+  + +++ ++ E++ SEQ ARM+AMD++S+NA EM+D+LTLT+NRTRQA IT ELIEIISGA+AL+
Sbjct:  133 IGDKIRGILYRTHSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSVIFNRFRSVISYKTEEKPIFSLNTIA-SAESMSIYDDIDA----------DVLQNYQEYNLANIIYYSLKESSTSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298          
BLAST of EY692438 vs. ExPASy Swiss-Prot
Match: ATPG_SILST (ATP synthase gamma chain OS=Silicibacter sp. (strain TM1040) GN=atpG PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.865e-24
Identity = 70/158 (44.30%), Postives = 96/158 (60.76%), Query Frame = 1
Query:   70 ITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 534
            +TE+++  + Y     +A DIL      EFD   I YSKF +VV+ +PT   ++  E    +AE       +  YE     ++  IL +L     +  +F  +LEN  SEQGARMSAMD+++RNAGEM+D+LT+ YNR+RQA IT ELIEIISGA AL
Sbjct:  143 LTEVKR--VGYVDAQGIAKDILARFDAGEFDVATIFYSKFQNVVTQIPTAQQIIPAEF---DAEGAEATSGVVDYE----PSEEAILADLLPRGVATQIFAGLLENGASEQGARMSAMDNATRNAGEMIDKLTIEYNRSRQAVITNELIEIISGAEAL 291          
The following BLAST results are available for this feature:
BLAST of EY692438 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ATPG_MESSB3.495e-2547.59ATP synthase gamma chain OS=Mesorhizobium sp. (str... [more]
ATPG_METNO4.565e-2541.34ATP synthase gamma chain OS=Methylobacterium nodul... [more]
ATPG_SILPO1.017e-2447.33ATP synthase gamma chain OS=Silicibacter pomeroyi ... [more]
ATPG_RHIME1.735e-2449.23ATP synthase gamma chain OS=Rhizobium meliloti GN=... [more]
ATPG_ACICJ1.735e-2437.08ATP synthase gamma chain OS=Acidiphilium cryptum (... [more]
ATPG_ROSDO2.266e-2442.41ATP synthase gamma chain OS=Roseobacter denitrific... [more]
ATPG_HUMAN2.266e-2438.42ATP synthase subunit gamma, mitochondrial OS=Homo ... [more]
ATPG_ZYMMO2.959e-2438.96ATP synthase gamma chain OS=Zymomonas mobilis GN=a... [more]
ATPG_MACFA2.959e-2437.29ATP synthase subunit gamma, mitochondrial OS=Macac... [more]
ATPG_SILST3.865e-2444.30ATP synthase gamma chain OS=Silicibacter sp. (stra... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-071-E10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692438 ID=EY692438; Name=EY692438; organism=Citrus sinensis; type=EST; length=971bp
AAACGTCATCTTGGGAGAGCCCCTAAAGCAATATTAGTACGTGACTCGAA
GAAAGATATTGCCCTTATCATAACTGAGTTACAGAAAAATCCTCTAAATT
ATACCCAGGTTTCCGTTCTTGCAGATGATATCTTAAAGAATGTAGAATTT
GATGCTTTGAGGATTATCTATAGCAAGTTCCATTCTGTGGTCTCCTTTCT
GCCGACAATGGCAACTGTATTATCGCCTGAGCTTGTGGAGAGAGAAGCCG
AATCTGGGGGAAAGCTTGGTGAGCTAGACTCCTATGAAATTGAAGGCGGT
GAAACAAAGGGTGAAATACTTCAAAATCTGGCTGAGTTCCAATTCTCTTG
TGTCATGTTCAATGCGGTGTTGGAGAATGCTTGCAGTGAGCAAGGGGCAA
GGATGTCTGCCATGGATAGCTCAAGCAGAAATGCGGGAGAAATGCTTGAT
CGCCTCACTCTTACTTATAACAGAACTCGTCAAGCATCTATCACCACCGA
GTTGATTGAGATTATATCTGGAGCATCAGCACTGGAAGGCTGATTACAAA
AGCGACAGTGCTCACTTTTCTTGACAGTGACGAAATAAATTCCTTGGTGG
AGGCTTTGTTCCAACTTCATTGTGGTACTTTCATAAGAGGTTTTGTTGAG
CTACTCCAATAATCTCTCCAGTGGCAAAACTTCCTTTTTGGGGAATAAAC
AATTATACTTGGGAAAATTTTCAATAATGGTTTTTGAATTCCCGAGGGAG
AGAACAAGATCTAGTAGGATCTTATAAAAAAAAAAAAAATAAATAAGGGG
GCGGCCCGCTCCTAAAGGAACCCAAACTTTAACTTACCCCGGGGATGGCC
AACACCCAAAACCTCTTTCTAATTGGGGTCCCCCAAAAATTTCAATTCCC
CCGGGGGGCCCGCCCTTTTTTAAAACCGCGCGGGGGGTCGGGGGAGAAAA
TCCCCCTGGGGGCGGTATTCA
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