EY692438

Overview
NameEY692438
Unique NameEY692438
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length971
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692438 vs. ExPASy Swiss-Prot
Match: ATPG_RHOSK (ATP synthase gamma chain OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=atpG PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 3.272e-23
Identity = 67/150 (44.67%), Postives = 95/150 (63.33%), Query Frame = 1
Query:   94 LNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 534
            + Y     +A D+L      EFD   I +++F SV+S +PT   V+ P + E E    G++  L  YE     ++  +L +L     +  +F A+LEN  SEQGARMSAMD+++RNAG+M++RLT+ YNR+RQA+IT ELIEIISGA AL
Sbjct:  149 MGYPVAQGIARDLLDRFDKGEFDVATIFFARFQSVISQVPTAQQVI-PAVFEGE----GEVSSLYDYE----PSEEGVLADLLPRGVATQIFTALLENGASEQGARMSAMDNATRNAGDMINRLTIEYNRSRQAAITKELIEIISGAEAL 289          
BLAST of EY692438 vs. ExPASy Swiss-Prot
Match: ATPG_RHOS1 (ATP synthase gamma chain OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=atpG PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 3.272e-23
Identity = 67/150 (44.67%), Postives = 95/150 (63.33%), Query Frame = 1
Query:   94 LNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 534
            + Y     +A D+L      EFD   I +++F SV+S +PT   V+ P + E E    G++  L  YE     ++  +L +L     +  +F A+LEN  SEQGARMSAMD+++RNAG+M++RLT+ YNR+RQA+IT ELIEIISGA AL
Sbjct:  149 MGYPVAQGIARDLLDRFDKGEFDVATIFFARFQSVISQVPTAQQVI-PAVFEGE----GEVSSLYDYE----PSEEGVLADLLPRGVATQIFTALLENGASEQGARMSAMDNATRNAGDMINRLTIEYNRSRQAAITKELIEIISGAEAL 289          
BLAST of EY692438 vs. ExPASy Swiss-Prot
Match: ATPG_SINMW (ATP synthase gamma chain OS=Sinorhizobium medicae (strain WSM419) GN=atpG PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 4.273e-23
Identity = 63/136 (46.32%), Postives = 83/136 (61.03%), Query Frame = 1
Query:  127 DILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 534
            ++  N EFD   + YS+F SV+S +PT   ++     E  AE    + E   YE +       IL +L     S  +F A+LEN   E GA+MSAMD+++RNAGEM+++LTL YNR RQA IT ELIEIISGA AL
Sbjct:  163 ELFDNGEFDVCTLFYSEFKSVISQIPTAQQLIPASAGEAVAEGASAIYE---YEPDAAA----ILSDLIPRNISVQIFRALLENVAGEMGAKMSAMDNATRNAGEMINKLTLNYNRQRQAQITKELIEIISGAEAL 291          
BLAST of EY692438 vs. ExPASy Swiss-Prot
Match: ATPG_RHILO (ATP synthase gamma chain OS=Rhizobium loti GN=atpG PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 4.273e-23
Identity = 67/147 (45.58%), Postives = 88/147 (59.86%), Query Frame = 1
Query:  115 VLADDILKNV-------EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 534
            V AD I K V        FD   + YS+F SV+S +PT   ++   +    A +      +  YE E     GEIL +L     S  +F A+LENA  E GA+MSAMD+++RNAGEM+++L++TYNR RQA IT ELIEIISGA AL
Sbjct:  152 VNADAIAKKVIHLFNEGAFDICTLFYSQFKSVISQVPTAQQIIPAGVASAPAAAVDGGNAVYEYEPE----PGEILSDLIPRNISVQVFRALLENAAGEMGAKMSAMDNATRNAGEMINKLSITYNRQRQAQITKELIEIISGAEAL 294          
BLAST of EY692438 vs. ExPASy Swiss-Prot
Match: ATPG_MOUSE (ATP synthase subunit gamma, mitochondrial OS=Mus musculus GN=Atp5c1 PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 5.580e-23
Identity = 65/177 (36.72%), Postives = 106/177 (59.89%), Query Frame = 1
Query:   10 LGRAPKAILVRDSKKDIALIITELQKNPLNYTQVSVLADDILKN-VEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALE 537
            +G   K IL R       +   ++ + P  +   SV+A ++L +  EFD   II+++F SV+S+      + S   +   AE+     ++D+          ++LQN  E+  + +++ ++ E+  SEQ ARM+AMD++S+NA +M+D+LTLT+NRTRQA IT ELIEIISGA+AL+
Sbjct:  133 VGEKIKGILYRTHSDQFLVSFKDVGRKPPTFGDASVIALELLNSGYEFDEGSIIFNQFKSVISYKTEEKPIFSLNTIAT-AETMSIYDDIDA----------DVLQNYQEYNLANLIYYSLKESTTSEQSARMTAMDNASKNASDMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298          
BLAST of EY692438 vs. ExPASy Swiss-Prot
Match: ATPG_RHOS4 (ATP synthase gamma chain OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=atpG PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 7.288e-23
Identity = 66/150 (44.00%), Postives = 95/150 (63.33%), Query Frame = 1
Query:   94 LNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 534
            + Y     +A D+L      EFD   I +++F SV++ +PT   V+ P + E E    G++  L  YE     ++  +L +L     +  +F A+LEN  SEQGARMSAMD+++RNAG+M++RLT+ YNR+RQA+IT ELIEIISGA AL
Sbjct:  149 MGYPVAQGIARDLLDRFDKGEFDVATIFFARFQSVINQVPTAQQVI-PAVFEGE----GEVSSLYDYE----PSEEGVLADLLPRGVATQIFTALLENGASEQGARMSAMDNATRNAGDMINRLTIEYNRSRQAAITKELIEIISGAEAL 289          
BLAST of EY692438 vs. ExPASy Swiss-Prot
Match: ATPG_RHOCS (ATP synthase gamma chain OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=atpG PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 9.519e-23
Identity = 70/180 (38.89%), Postives = 105/180 (58.33%), Query Frame = 1
Query:   10 LGRAPKAILVRDSKKDIALIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVL--SPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 534
            +GR  + +L R+    I     ++ +  L++     +   +L+  E   FD   +IY+KF S ++ + T   V+  +P +    AE+         YE E  E K  IL  L     +  +++A+LE+A SEQGARM+AMD+++RNAG+M+ +LTL YNRTRQASIT ELIEIISGA A+
Sbjct:  121 VGRKGRDLLRREYAGMIVHSFEDVGRRRLSFADADRITAKVLELFEAGEFDVATVIYNKFRSAITQVVTAQQVIPFAPAVATEPAETAEAK---PLYEFEPNEEK--ILAELLPRNLAVQVYSALLESAASEQGARMTAMDNATRNAGDMIKKLTLVYNRTRQASITKELIEIISGAEAV 295          
BLAST of EY692438 vs. ExPASy Swiss-Prot
Match: ATPG_AGRVS (ATP synthase gamma chain OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=atpG PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 9.519e-23
Identity = 62/130 (47.69%), Postives = 82/130 (63.08%), Query Frame = 1
Query:  145 EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 534
            EFD   + YS+F SV+S +PT A  L P  V     +      +  YE +       IL +L     +  +F A+LENA  E GA+MSAMD+++RNAGEM+++LTL+YNR RQA ITTELIEII+GA AL
Sbjct:  169 EFDVCTLFYSEFKSVISQIPT-ARQLIPAAVGDAPAASSSAAAIYDYEPDAAS----ILSDLIPRNIAVQIFRALLENAAGEMGAKMSAMDNATRNAGEMINKLTLSYNRQRQAKITTELIEIIAGAEAL 293          
BLAST of EY692438 vs. ExPASy Swiss-Prot
Match: ATPG_BEII9 (ATP synthase gamma chain OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=atpG PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.624e-22
Identity = 70/178 (39.33%), Postives = 100/178 (56.18%), Query Frame = 1
Query:   10 LGRAPKAILVRDSKKDIALIITELQKNPLNYTQVSVLADDIL---KNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 534
            +G+    +L R   + I  +I       + +     +   IL   K+ EFD   + ++KF +V+  +PT A  L P  V+ + ++      L  YE     ++ +IL  L     +  +  A+LENA SEQGARMSAMD++SRNAGEM+ + TL YNR+RQA IT ELIEIISGA AL
Sbjct:  121 VGKKGYDLLKRQFGEQILELIELRSVRTIGFVNAEAIGRKILNLYKDAEFDVCTLFFAKFRTVLHQIPT-AQQLIPLAVKTQEDAPAAPPSLYEYE----PSEEQILATLLPRNITIQVLRALLENAASEQGARMSAMDNASRNAGEMIKKQTLKYNRSRQAMITKELIEIISGAEAL 293          
BLAST of EY692438 vs. ExPASy Swiss-Prot
Match: ATPG_BRAJA (ATP synthase gamma chain OS=Bradyrhizobium japonicum GN=atpG PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.121e-22
Identity = 69/147 (46.94%), Postives = 88/147 (59.86%), Query Frame = 1
Query:  115 VLADDILKNV-------EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 534
            V A+DI K V       EFD   + YS+F SV++ +PT   ++ P +VE      G      SYE E  E   EIL  L     +  +F A+LEN  S  GA+MSAMD+++RNAGEM+ + TL YNRTRQA IT ELIEIISGA A+
Sbjct:  152 VNAEDIAKKVLARFEAGEFDVCTLFYSRFRSVIAQIPTAQQII-PLVVEE-----GTAASTTSYEYEPEED--EILTRLLPRNLAVQIFRALLENNASFYGAQMSAMDNATRNAGEMIRKQTLVYNRTRQAQITKELIEIISGAEAV 290          
The following BLAST results are available for this feature:
BLAST of EY692438 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ATPG_RHOSK3.272e-2344.67ATP synthase gamma chain OS=Rhodobacter sphaeroide... [more]
ATPG_RHOS13.272e-2344.67ATP synthase gamma chain OS=Rhodobacter sphaeroide... [more]
ATPG_SINMW4.273e-2346.32ATP synthase gamma chain OS=Sinorhizobium medicae ... [more]
ATPG_RHILO4.273e-2345.58ATP synthase gamma chain OS=Rhizobium loti GN=atpG... [more]
ATPG_MOUSE5.580e-2336.72ATP synthase subunit gamma, mitochondrial OS=Mus m... [more]
ATPG_RHOS47.288e-2344.00ATP synthase gamma chain OS=Rhodobacter sphaeroide... [more]
ATPG_RHOCS9.519e-2338.89ATP synthase gamma chain OS=Rhodospirillum centenu... [more]
ATPG_AGRVS9.519e-2347.69ATP synthase gamma chain OS=Agrobacterium vitis (s... [more]
ATPG_BEII91.624e-2239.33ATP synthase gamma chain OS=Beijerinckia indica su... [more]
ATPG_BRAJA2.121e-2246.94ATP synthase gamma chain OS=Bradyrhizobium japonic... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-071-E10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692438 ID=EY692438; Name=EY692438; organism=Citrus sinensis; type=EST; length=971bp
AAACGTCATCTTGGGAGAGCCCCTAAAGCAATATTAGTACGTGACTCGAA
GAAAGATATTGCCCTTATCATAACTGAGTTACAGAAAAATCCTCTAAATT
ATACCCAGGTTTCCGTTCTTGCAGATGATATCTTAAAGAATGTAGAATTT
GATGCTTTGAGGATTATCTATAGCAAGTTCCATTCTGTGGTCTCCTTTCT
GCCGACAATGGCAACTGTATTATCGCCTGAGCTTGTGGAGAGAGAAGCCG
AATCTGGGGGAAAGCTTGGTGAGCTAGACTCCTATGAAATTGAAGGCGGT
GAAACAAAGGGTGAAATACTTCAAAATCTGGCTGAGTTCCAATTCTCTTG
TGTCATGTTCAATGCGGTGTTGGAGAATGCTTGCAGTGAGCAAGGGGCAA
GGATGTCTGCCATGGATAGCTCAAGCAGAAATGCGGGAGAAATGCTTGAT
CGCCTCACTCTTACTTATAACAGAACTCGTCAAGCATCTATCACCACCGA
GTTGATTGAGATTATATCTGGAGCATCAGCACTGGAAGGCTGATTACAAA
AGCGACAGTGCTCACTTTTCTTGACAGTGACGAAATAAATTCCTTGGTGG
AGGCTTTGTTCCAACTTCATTGTGGTACTTTCATAAGAGGTTTTGTTGAG
CTACTCCAATAATCTCTCCAGTGGCAAAACTTCCTTTTTGGGGAATAAAC
AATTATACTTGGGAAAATTTTCAATAATGGTTTTTGAATTCCCGAGGGAG
AGAACAAGATCTAGTAGGATCTTATAAAAAAAAAAAAAATAAATAAGGGG
GCGGCCCGCTCCTAAAGGAACCCAAACTTTAACTTACCCCGGGGATGGCC
AACACCCAAAACCTCTTTCTAATTGGGGTCCCCCAAAAATTTCAATTCCC
CCGGGGGGCCCGCCCTTTTTTAAAACCGCGCGGGGGGTCGGGGGAGAAAA
TCCCCCTGGGGGCGGTATTCA
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