EY692436

Overview
NameEY692436
Unique NameEY692436
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length932
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692436 vs. ExPASy Swiss-Prot
Match: OS35_SOLCO (Osmotin-like protein OSML15 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.152e-12
Identity = 42/107 (39.25%), Postives = 58/107 (54.21%), Query Frame = 2
Query:    5 CVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSYGVSLVDGFNVP*C-APPHEGKGVCREGVCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCC 322
            C TGDCG  LEC G  G  P TLA+++L+   N L  + +S++DGFN+P    P + G G C    C A++   CP +L+V   PG      C + C  FG  + CC
Sbjct:   83 CQTGDCGGVLECKG-WGKPPNTLAEYALNQFSN-LDFWDISVIDGFNIPMSFGPTNPGPGKCHPIQCVANINGECPGSLRV---PG-----GCNNPCTTFGGQQYCC 179          
BLAST of EY692436 vs. ExPASy Swiss-Prot
Match: OLPA_TOBAC (Osmotin-like protein OS=Nicotiana tabacum GN=OLPA PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.423e-12
Identity = 42/107 (39.25%), Postives = 57/107 (53.27%), Query Frame = 2
Query:    5 CVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSYGVSLVDGFNVP*C-APPHEGKGVCREGVCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCC 322
            C TGDCG  LEC G  G  P TLA+++L+   N L  + +S++DGFN+P    P   G G C    C A++   CP +L+V   PG      C + C  FG  + CC
Sbjct:   83 CQTGDCGGVLECKG-WGKPPNTLAEYALNQFSN-LDFWDISVIDGFNIPMSFGPTKPGPGKCHGIQCTANINGECPGSLRV---PG-----GCNNPCTTFGGQQYCC 179          
BLAST of EY692436 vs. ExPASy Swiss-Prot
Match: OSMO_TOBAC (Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 9.250e-12
Identity = 42/108 (38.89%), Postives = 58/108 (53.70%), Query Frame = 2
Query:    2 SCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSYGVSLVDGFNVP*C-APPHEGKGVCREGVCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCC 322
            +C TGDCG  L+C G  G  P TLA+++L    + L  + +SLVDGFN+P   AP +   G C    C A++   CP+ L+V   PG      C + C  FG  + CC
Sbjct:   81 TCQTGDCGGVLQCTG-WGKPPNTLAEYALDQ-FSGLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPRELRV---PG-----GCNNPCTTFGGQQYCC 178          
BLAST of EY692436 vs. ExPASy Swiss-Prot
Match: NP24_SOLLC (Protein NP24 OS=Solanum lycopersicum PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.208e-11
Identity = 43/108 (39.81%), Postives = 57/108 (52.78%), Query Frame = 2
Query:    2 SCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSYGVSLVDGFNVP*C-APPHEGKGVCREGVCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCC 322
            +C TGDCG  L+C G  G  P TLA+++L    N L  + +SLVDGFN+P   AP     G C    C A++   CP+ L+V   PG      C + C  FG  + CC
Sbjct:   81 TCQTGDCGGVLQCTG-WGKPPNTLAEYALDQFSN-LDFWDISLVDGFNIPMTFAPTKPSGGKCHAIHCTANINGECPRALKV---PG-----GCNNPCTTFGGQQYCC 178          
BLAST of EY692436 vs. ExPASy Swiss-Prot
Match: PRR1_TOBAC (Pathogenesis-related protein R major form OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.578e-11
Identity = 44/117 (37.61%), Postives = 57/117 (48.72%), Query Frame = 2
Query:    2 SCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSYGVSLVDGFNVP*CAPPHEGKGVCREGVCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCKNH*HSPQTC 352
            +C TGDC   LEC G G A P TLA+F+L+  + D     +SLVDGFN+P    P  G   CR   C A +   CP  L+ +          C + C    T+E CC N    P +C
Sbjct:   84 NCETGDCNGMLECQGYGKA-PNTLAEFALNQPNQDF--VDISLVDGFNIPMEFSPTNGG--CRNLRCTAPINEQCPAQLKTQG--------GCNNPCTVIKTNEYCCTN---GPGSC 184          
BLAST of EY692436 vs. ExPASy Swiss-Prot
Match: TLP_ACTDE (Thaumatin-like protein OS=Actinidia deliciosa GN=tlp PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.691e-11
Identity = 43/109 (39.45%), Postives = 57/109 (52.29%), Query Frame = 2
Query:    5 CVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSYGVSLVDGFNVP*CAPPHEGKGVCREGV-CRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCKN 328
            C TGDC   L+C   G   P TLA+++L+   N+L  + +SLVDGFNV     P  G   C  G+ C AD+   CP  L  R+P G      C + C  F TD+ CC +
Sbjct:   84 CQTGDCNGLLQCQAFG-QPPNTLAEYALNQ-FNNLDFFDISLVDGFNVAMEFSPTSGG--CTRGIKCTADINGQCPNEL--RAPGG------CNNPCTVFKTDQYCCNS 180          
The following BLAST results are available for this feature:
BLAST of EY692436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
OS35_SOLCO4.152e-1239.25Osmotin-like protein OSML15 OS=Solanum commersonii... [more]
OLPA_TOBAC5.423e-1239.25Osmotin-like protein OS=Nicotiana tabacum GN=OLPA ... [more]
OSMO_TOBAC9.250e-1238.89Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2[more]
NP24_SOLLC1.208e-1139.81Protein NP24 OS=Solanum lycopersicum PE=1 SV=2[more]
PRR1_TOBAC1.578e-1137.61Pathogenesis-related protein R major form OS=Nicot... [more]
TLP_ACTDE2.691e-1139.45Thaumatin-like protein OS=Actinidia deliciosa GN=t... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-071-E08-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692436 ID=EY692436; Name=EY692436; organism=Citrus sinensis; type=EST; length=932bp
CTCCTGCGTCACGGGCGACTGCGGCCACCGCTTGGAATGCAACGGACTCG
GCGGGGCGACTCCAGCCACCCTGGCCCAGTTCAGCCTCCACCACGGCCAC
AACGACCTCTCCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCC
CTGATGTGCCCCCCCGCACGAGGGCAAGGGCGTCTGTCGGGAGGGGGTTT
GTCGCGCTGACCTGCTAGCCACGTGTCCTCAGAACCTGCAAGTGAGGTCA
CCGCCGGGTCACGGCCGCGTGGTGGCATGTAAGAGTGGGTGTGAGGCGTT
TGGTACGGACGAGCTGTGTTGTAAGAACCATTAACACAGTCCGCAGACAT
GCCGGGGGTTCGAGCTTTTCGGAGTTCTTTCAGCAAGCCTTGGCCAGCCC
GATGAATTTATGCCCAGGAAAGCCCTTCCCTCATGGATGAATGGTCCCCC
GCCCCGGGAAGCAAAAATTTTTTTTTGGTCCTAAAAAAAACACGGGGAAA
AAATAAAAAGCGGGGGACACCAAGGCTCCCCCGGGGTTAAGATTGGTGGG
GGTTTGTTTTTCCTCAATAACAAAAATTTGGTTTTTTAATTTATTCCGGA
ACAAAAAAAAAAAATTTAAAAAGGATACAAGTGGACTTTGGGTCGGGATT
AGGGTCCCTCATCCCTGCACCCTGGGGGGGGGTTTTTTGACCCTCCCACT
CCCTTTGAGAGGGGGGAGAGCATGGGTTTTGTTGGTTGTGTATATTTATT
TTTTATGAGAAAGAAGAGAGAAAGTAATCAGGAGAACGAGAATACAAAAG
AATAGGTAGCAAGGGTAGCGAACTTCATAGACAATAAAATAGAGACAATT
ATAGTGTAGCTAATCGTCACCTATCACTGACGAAAACCCAATCACGGACG
AGGAATAGATAACAAAGAAGTTCAAACGAAGT
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