EY692410
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY692410 vs. ExPASy Swiss-Prot
Match: H36_STYLE (Histone H3-6 (Fragment) OS=Stylonychia lemnae GN=H3-6 PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.868e-47 Identity = 96/114 (84.21%), Postives = 106/114 (92.98%), Query Frame = 2 Query: 77 STGGKAPRKQLATKAARKS--APTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMP 412 +TGGKAPRK +A K A+KS A TGGVKKPHR+RPGTVALREIR++QKSTELLIRKLPFQRLVREIAQ++K+DLRFQS AVLALQEAAEAY+VGLFEDTNLCAIHAKRVTIMP Sbjct: 1 NTGGKAPRKHIAHKQAKKSSAAAATGGVKKPHRFRPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQEYKSDLRFQSQAVLALQEAAEAYMVGLFEDTNLCAIHAKRVTIMP 114
BLAST of EY692410 vs. ExPASy Swiss-Prot
Match: H35_STYLE (Histone H3-5 (Fragment) OS=Stylonychia lemnae GN=H3-5 PE=3 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 4.161e-47 Identity = 97/114 (85.09%), Postives = 104/114 (91.23%), Query Frame = 2 Query: 77 STGGKAPRKQLATKAARKSAPTTG--GVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMP 412 +TG KAPRKQLA KAARKS GVKKPHR+RPGTVALREIR++QKSTELLIRKLPFQRLVREIAQ++K+DLRFQS AVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMP Sbjct: 1 NTGAKAPRKQLANKAARKSTNVNAVSGVKKPHRFRPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQEYKSDLRFQSQAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMP 114
BLAST of EY692410 vs. ExPASy Swiss-Prot
Match: H33L1_CAEEL (Histone H3.3-like type 1 OS=Caenorhabditis elegans GN=his-70 PE=2 SV=3) HSP 1 Score: 188.734 bits (478), Expect = 4.161e-47 Identity = 98/126 (77.78%), Postives = 108/126 (85.71%), Query Frame = 2 Query: 47 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 424 MARTK TARKS GGKAPRK LATKAARK P G VKK RYRP + AL+EIRKYQKSTELL+RKLPFQRLVRE+AQ+ ++RFQS A+ AL EAAEAYL+GLFEDTNLCAIHAKRVTIMPKD+Q Sbjct: 1 MARTKHTARKSFGGKAPRKSLATKAARKVFPVDGQVKK--RYRPSSNALKEIRKYQKSTELLVRKLPFQRLVREVAQEIMPNVRFQSAAIQALHEAAEAYLIGLFEDTNLCAIHAKRVTIMPKDMQ 124
BLAST of EY692410 vs. ExPASy Swiss-Prot
Match: H38_STYLE (Histone H3-8 (Fragment) OS=Stylonychia lemnae GN=H3-8 PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 5.434e-47 Identity = 94/113 (83.19%), Postives = 102/113 (90.27%), Query Frame = 2 Query: 77 STGGKAPRKQLATKAARKSA-PTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMP 412 +TG KAPRK LA KAARK+A P G+KKPHRYRPGTVALREIRKYQKST+LLIRKLPFQRLVREIA ++K DLRFQS AVLALQEAAEAY++GLFEDTNLCAIH KRVTIMP Sbjct: 1 NTGAKAPRKHLANKAARKTAAPANAGIKKPHRYRPGTVALREIRKYQKSTDLLIRKLPFQRLVREIASEYKNDLRFQSSAVLALQEAAEAYMIGLFEDTNLCAIHGKRVTIMP 113
BLAST of EY692410 vs. ExPASy Swiss-Prot
Match: H33_STYLE (Histone H3-3 (Fragment) OS=Stylonychia lemnae GN=H3-3 PE=3 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 7.097e-47 Identity = 96/114 (84.21%), Postives = 104/114 (91.23%), Query Frame = 2 Query: 77 STGGKAPRKQLATKAARKS--APTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMP 412 +TGGKAPRK +A K A+KS A TGGVKKPHR+RPGTVALREIR++QKSTELLIRKLPFQRLVREIA +FK DLRFQS AVLALQEA+EAYLVGLFEDTNLCAIHAKRVTIMP Sbjct: 1 NTGGKAPRKHIAHKQAKKSSAAAATGGVKKPHRFRPGTVALREIRRFQKSTELLIRKLPFQRLVREIASEFKNDLRFQSSAVLALQEASEAYLVGLFEDTNLCAIHAKRVTIMP 114
BLAST of EY692410 vs. ExPASy Swiss-Prot
Match: H39_STYLE (Histone H3-2 (Fragment) OS=Stylonychia lemnae GN=H3-2 PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 7.847e-46 Identity = 95/114 (83.33%), Postives = 103/114 (90.35%), Query Frame = 2 Query: 77 STGGKAPRKQLATKAARKS--APTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMP 412 +TGGKAPRK +A K A+KS A TGGVKKPHR+RPGTVALREIR++QKSTELLIRKLPFQRLVREIA +FK DLRFQS AVLALQEA+EAYLVGLFEDTNL AIHAKRVTIMP Sbjct: 1 NTGGKAPRKHIAHKQAKKSSAAAATGGVKKPHRFRPGTVALREIRRFQKSTELLIRKLPFQRLVREIASEFKNDLRFQSSAVLALQEASEAYLVGLFEDTNLAAIHAKRVTIMP 114
BLAST of EY692410 vs. ExPASy Swiss-Prot
Match: H37_STYLE (Histone H3-7 (Fragment) OS=Stylonychia lemnae GN=H3-7 PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 7.847e-46 Identity = 95/114 (83.33%), Postives = 103/114 (90.35%), Query Frame = 2 Query: 77 STGGKAPRKQLATKAARKS--APTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMP 412 +TGGKAPRK +A K A+KS A TGGVKKPHR+RPGTVALREIR++QKSTELLIRKLPFQRLVREIA +FK DLRFQS AVLALQEA+EAYLVGLFEDTNL AIHAKRVTIMP Sbjct: 1 NTGGKAPRKHIAHKQAKKSSAAAATGGVKKPHRFRPGTVALREIRRFQKSTELLIRKLPFQRLVREIASEFKNDLRFQSSAVLALQEASEAYLVGLFEDTNLAAIHAKRVTIMP 114
BLAST of EY692410 vs. ExPASy Swiss-Prot
Match: H3_GUITH (Histone H3 OS=Guillardia theta PE=3 SV=3) HSP 1 Score: 178.718 bits (452), Expect = 4.306e-44 Identity = 92/125 (73.60%), Postives = 105/125 (84.00%), Query Frame = 2 Query: 47 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDI 421 MARTKQTARK+ GG +++ K A+ +KK HRY+PGTVALREIRKYQKST LLIRKLPFQRLVRE+AQD+K+DLRFQ+ AVLALQEA+E+YLV LFEDTNLCAIHAKRVTIMPKDI Sbjct: 1 MARTKQTARKTVGGDI-NSRISEKRAKSDNSKNIDLKKVHRYKPGTVALREIRKYQKSTNLLIRKLPFQRLVRELAQDYKSDLRFQNSAVLALQEASESYLVNLFEDTNLCAIHAKRVTIMPKDI 124
BLAST of EY692410 vs. ExPASy Swiss-Prot
Match: H3L4_ARATH (Histone H3-like 4 OS=Arabidopsis thaliana GN=At5g12910 PE=2 SV=3) HSP 1 Score: 174.096 bits (440), Expect = 1.061e-42 Identity = 90/126 (71.43%), Postives = 106/126 (84.13%), Query Frame = 2 Query: 47 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 424 MAR+ QTARK+TGGKAP A + + S P +KKP+RY+PGTVALREIRKYQK+T+L+IRKLPFQRLV+EIAQ K DLRFQ+ AV ALQEAAEA++VG+FEDTNLCA+HAKR TIMPKDIQ Sbjct: 1 MARSNQTARKATGGKAPH--FAMRVWQHSTPP---LKKPYRYKPGTVALREIRKYQKTTDLVIRKLPFQRLVKEIAQSLKADLRFQTGAVSALQEAAEAFMVGMFEDTNLCAMHAKRSTIMPKDIQ 121
BLAST of EY692410 vs. ExPASy Swiss-Prot
Match: H3L_BOVIN (Histone H3-like OS=Bos taurus PE=2 SV=3) HSP 1 Score: 163.31 bits (412), Expect = 1.872e-39 Identity = 85/119 (71.43%), Postives = 97/119 (81.51%), Query Frame = 2 Query: 47 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFED---TNLCAIHAK 394 MARTK+TA KSTGGK PRKQL +AA KSAP+T G+ KPHRYRPGTVALREIR YQKST LIRKLPFQRLVREIAQDFKTDL+FQS A+ LQEA+EAYLV E +NL ++++ Sbjct: 1 MARTKRTAYKSTGGKVPRKQLVIEAAGKSAPSTSGMTKPHRYRPGTVALREIRPYQKSTHFLIRKLPFQRLVREIAQDFKTDLKFQSAAIRTLQEASEAYLVVFLESKQHSNLARMYSQ 119 The following BLAST results are available for this feature:
BLAST of EY692410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
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Sequences
The
following sequences are available for this feature:
EST sequence >EY692410 ID=EY692410; Name=EY692410; organism=Citrus sinensis; type=EST; length=959bpback to top |