EY692410

Overview
NameEY692410
Unique NameEY692410
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length959
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY692410 vs. ExPASy Swiss-Prot
Match: H32_TETMI (Histone H3.2 (Fragment) OS=Tetrahymena mimbres PE=3 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 7.920e-14
Identity = 37/41 (90.24%), Postives = 39/41 (95.12%), Query Frame = 2 
Query:   47 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHR 169
            MARTKQTARKSTG KAPRKQLA+KAARKSAP TGG+KKPHR
Sbjct:    1 MARTKQTARKSTGAKAPRKQLASKAARKSAPATGGIKKPHR 41
[Close]
BLAST of EY692410 vs. ExPASy Swiss-Prot
Match: H32_TETMA (Histone H3.2 (Fragment) OS=Tetrahymena malaccensis PE=3 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 7.920e-14
Identity = 37/41 (90.24%), Postives = 39/41 (95.12%), Query Frame = 2 
Query:   47 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHR 169
            MARTKQTARKSTG KAPRKQLA+KAARKSAP TGG+KKPHR
Sbjct:    1 MARTKQTARKSTGAKAPRKQLASKAARKSAPATGGIKKPHR 41
[Close]
BLAST of EY692410 vs. ExPASy Swiss-Prot
Match: H32_TETLE (Histone H3.2 (Fragment) OS=Tetrahymena leucophrys PE=3 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 7.920e-14
Identity = 37/41 (90.24%), Postives = 39/41 (95.12%), Query Frame = 2 
Query:   47 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHR 169
            MARTKQTARKSTG KAPRKQLA+KAARKSAP TGG+KKPHR
Sbjct:    1 MARTKQTARKSTGAKAPRKQLASKAARKSAPATGGIKKPHR 41
[Close]
BLAST of EY692410 vs. ExPASy Swiss-Prot
Match: H32_TETHY (Histone H3.2 (Fragment) OS=Tetrahymena hyperangularis PE=3 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 7.920e-14
Identity = 37/41 (90.24%), Postives = 39/41 (95.12%), Query Frame = 2 
Query:   47 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHR 169
            MARTKQTARKSTG KAPRKQLA+KAARKSAP TGG+KKPHR
Sbjct:    1 MARTKQTARKSTGAKAPRKQLASKAARKSAPATGGIKKPHR 41
[Close]
BLAST of EY692410 vs. ExPASy Swiss-Prot
Match: H32_TETFU (Histone H3.2 (Fragment) OS=Tetrahymena furgasoni PE=3 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 7.920e-14
Identity = 37/41 (90.24%), Postives = 39/41 (95.12%), Query Frame = 2 
Query:   47 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHR 169
            MARTKQTARKSTG KAPRKQLA+KAARKSAP TGG+KKPHR
Sbjct:    1 MARTKQTARKSTGAKAPRKQLASKAARKSAPATGGIKKPHR 41
[Close]
BLAST of EY692410 vs. ExPASy Swiss-Prot
Match: H32_TETEL (Histone H3.2 (Fragment) OS=Tetrahymena elliotti PE=3 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 7.920e-14
Identity = 37/41 (90.24%), Postives = 39/41 (95.12%), Query Frame = 2 
Query:   47 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHR 169
            MARTKQTARKSTG KAPRKQLA+KAARKSAP TGG+KKPHR
Sbjct:    1 MARTKQTARKSTGAKAPRKQLASKAARKSAPATGGIKKPHR 41
[Close]
BLAST of EY692410 vs. ExPASy Swiss-Prot
Match: H32_TETCU (Histone H3.2 (Fragment) OS=Tetrahymena caudata PE=3 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 7.920e-14
Identity = 37/41 (90.24%), Postives = 39/41 (95.12%), Query Frame = 2 
Query:   47 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHR 169
            MARTKQTARKSTG KAPRKQLA+KAARKSAP TGG+KKPHR
Sbjct:    1 MARTKQTARKSTGAKAPRKQLASKAARKSAPATGGIKKPHR 41
[Close]
BLAST of EY692410 vs. ExPASy Swiss-Prot
Match: H32_TETCA (Histone H3.2 (Fragment) OS=Tetrahymena capricornis PE=3 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 7.920e-14
Identity = 37/41 (90.24%), Postives = 39/41 (95.12%), Query Frame = 2 
Query:   47 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHR 169
            MARTKQTARKSTG KAPRKQLA+KAARKSAP TGG+KKPHR
Sbjct:    1 MARTKQTARKSTGAKAPRKQLASKAARKSAPATGGIKKPHR 41
[Close]
BLAST of EY692410 vs. ExPASy Swiss-Prot
Match: H32_TETAU (Histone H3.2 (Fragment) OS=Tetrahymena australis PE=3 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 7.920e-14
Identity = 37/41 (90.24%), Postives = 39/41 (95.12%), Query Frame = 2 
Query:   47 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHR 169
            MARTKQTARKSTG KAPRKQLA+KAARKSAP TGG+KKPHR
Sbjct:    1 MARTKQTARKSTGAKAPRKQLASKAARKSAPATGGIKKPHR 41
[Close]
BLAST of EY692410 vs. ExPASy Swiss-Prot
Match: H32_TETAM (Histone H3.2 (Fragment) OS=Tetrahymena americanus PE=3 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 7.920e-14
Identity = 37/41 (90.24%), Postives = 39/41 (95.12%), Query Frame = 2 
Query:   47 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHR 169
            MARTKQTARKSTG KAPRKQLA+KAARKSAP TGG+KKPHR
Sbjct:    1 MARTKQTARKSTGAKAPRKQLASKAARKSAPATGGIKKPHR 41
The following BLAST results are available for this feature:
BLAST of EY692410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
H32_TETMI7.920e-1490.24Histone H3.2 (Fragment) OS=Tetrahymena mimbres PE=... [more]
H32_TETMA7.920e-1490.24Histone H3.2 (Fragment) OS=Tetrahymena malaccensis... [more]
H32_TETLE7.920e-1490.24Histone H3.2 (Fragment) OS=Tetrahymena leucophrys ... [more]
H32_TETHY7.920e-1490.24Histone H3.2 (Fragment) OS=Tetrahymena hyperangula... [more]
H32_TETFU7.920e-1490.24Histone H3.2 (Fragment) OS=Tetrahymena furgasoni P... [more]
H32_TETEL7.920e-1490.24Histone H3.2 (Fragment) OS=Tetrahymena elliotti PE... [more]
H32_TETCU7.920e-1490.24Histone H3.2 (Fragment) OS=Tetrahymena caudata PE=... [more]
H32_TETCA7.920e-1490.24Histone H3.2 (Fragment) OS=Tetrahymena capricornis... [more]
H32_TETAU7.920e-1490.24Histone H3.2 (Fragment) OS=Tetrahymena australis P... [more]
H32_TETAM7.920e-1490.24Histone H3.2 (Fragment) OS=Tetrahymena americanus ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-071-C03-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692410 ID=EY692410; Name=EY692410; organism=Citrus sinensis; type=EST; length=959bp
CCACGCGTCCGGAGAAATTGAGTGGAAGAGTTGACCATACTCAGAGATGG
CCCGTACCAAGCAAACTGCACGTAAGTCAACCGGAGGAAAGGCTCCTAGG
AAGCAACTTGCTACCAAGGCCGCCCGTAAGTCTGCGCCCACCACCGGTGG
TGTTAAGAAGCCTCATCGTTACCGTCCTGGAACCGTCGCCCTTCGAGAAA
TTCGCAAGTACCAGAAGAGTACCGAGCTGCTTATCAGGAAACTCCCATTC
CAGAGACTTGTTCGTGAAATTGCTCAGGACTTTAAGACTGATCTGCGTTT
CCAGAGCCATGCAGTACTGGCCCTGCAGGAGGCAGCGGAGGCTTACCTTG
TTGGTCTCTTCGAGGACACTAACCTCTGCGCCATTCATGCAAAGCGTGTC
ACTATTATGCCCAAGGACATACAGCTTGCCCGTAGGATCCGTGGCGAGCG
TGCTTAAGCGTAATTGCTGCTTGCTTCAATTGAATGACTGGAAGGGAAGG
GGGAAGTTGTAATGTGTTAATTTGTACGTGGGGGTTGGTGGGGGTAGATA
GGGGTAGGATTCCAGTAGTTATTAGAATATGGCTTTTGTCCTCATCTGGG
TTTTGTTTTTTGGTGGTGTTTTATAATGTCTATTTGTTGATGATGGGGAT
TTTAATTTCCCCAAGGAAACAGGCTTTTTGGGGTCTTTTTGATACCCTGT
TGCCACAAAAGAGGTGGGGGATGAATCAAGATTAATTTGGGGGAAGAAAC
AAAAGCTAAGGTTGTATAATAAATCAAAAAAACATTATAATTATAGTGTT
ATAACGAACAACCTTAACATAAAAGTGAAAACAAAAACACTGGTACGCAC
TTTTCAAAAGTAATCACATATTTCACTACATAAGAACATTAATCTAGTAA
CAAATTATTTAGAATTTGGCACGCGGACATATTTTTTAATCCTAAGTAAC
CTCGCTTAT
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