EY692366

Overview
NameEY692366
Unique NameEY692366
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length940
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692366 vs. ExPASy Swiss-Prot
Match: UCRI_RICBR (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia bellii (strain RML369-C) GN=petA PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.054e-15
Identity = 60/166 (36.14%), Postives = 84/166 (50.60%), Query Frame = 3
Query:  303 DEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKKPRVAWSCW-GLHTSWLAFLWQNAWGFLVDG-FCPLQGFYLPISLGGFQKGTRPI 794
            D  N  +    D SK +   F++     V A      +   + S++ S DVLA++S+EVDLS+I  G TVTVKW+GKPVFI  RT + I  A +V +  L DP++D +RVK     W    G+ T        N   +  DG FCP  G     S G  ++G  P+
Sbjct:    6 DTNNDNKVEFEDRSKTSRRDFMVLTASSVAAVGAACTLWPLINSLNPSADVLALSSIEVDLSNIAVGQTVTVKWQGKPVFITNRTPDKIAEARAVKMSELIDPEEDQDRVKAGHDNWLVTIGICTHLGCVPLANQGDY--DGWFCPCHGSQYD-SSGRVRRGPAPL 168          
BLAST of EY692366 vs. ExPASy Swiss-Prot
Match: UCRI_RICTY (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia typhi GN=petA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.768e-15
Identity = 39/74 (52.70%), Postives = 51/74 (68.92%), Query Frame = 3
Query:  432 SMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKKPRVAW 653
            S++ S DVLA++S+EVDLSSI  G TVTVKW+GKP+FI  RT + I  A +V +  L DP++D  RVK     W
Sbjct:   40 SLNPSTDVLALSSIEVDLSSIAIGQTVTVKWQGKPIFITNRTPDGIASARAVKMSELIDPEKDEVRVKAGHDNW 113          

HSP 2 Score: 23.483 bits (49), Expect = 6.768e-15
Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = 1
Query:  646 WLGVVGGCTHLG 681
            WL  +G CTHLG
Sbjct:  113 WLVTIGICTHLG 124          
BLAST of EY692366 vs. ExPASy Swiss-Prot
Match: UCRI_RICPR (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia prowazekii GN=petA PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.180e-14
Identity = 52/127 (40.94%), Postives = 69/127 (54.33%), Query Frame = 3
Query:  432 SMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKKPRVAW-----SCWGLHTSWLAFLWQ-NAWGFLVDGFCPLQGFYLPISLGGFQKGTRPI 794
            S + S DVLA++S+EVDLS+I  G TVTVKW+GKP+FI  RT ++I  A +V +  L DP++D  RVK     W      C  L    L+   + N W      FCP  G     S G  +KG  P+
Sbjct:   40 SFNPSADVLALSSIEVDLSNIAIGQTVTVKWQGKPIFITNRTHDEIAAARAVKMSELIDPERDEVRVKAGHDNWLVTIGICTHLGCVPLSHKGEYNGW------FCPCHGSQYD-SSGRVRKGPAPL 159          
BLAST of EY692366 vs. ExPASy Swiss-Prot
Match: UCRI_RICFE (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia felis GN=petA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.985e-14
Identity = 52/123 (42.28%), Postives = 68/123 (55.28%), Query Frame = 3
Query:  432 SMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKKPRVAWSCW-GLHTSWLAFLWQNAWGFLVDG-FCPLQGFYLPISLGGFQKGTRPI 794
            S++ S DVLA++S+EVDLS+I  G TVTVKW+GKPVFI  RT + I  A +V +  L DP+ D  RVK     W    G+ T        N   +  DG FCP  G     S G  ++G  P+
Sbjct:   40 SLNPSADVLALSSIEVDLSNIAVGQTVTVKWQGKPVFITNRTPDKIAEARAVKMSELIDPETDEARVKAGHDNWLVTIGICTHLGCVPLANQGEY--DGWFCPCHGSQYD-SSGRVRRGPAPL 159          
BLAST of EY692366 vs. ExPASy Swiss-Prot
Match: UCRI_RICCN (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia conorii GN=petA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.985e-14
Identity = 52/123 (42.28%), Postives = 68/123 (55.28%), Query Frame = 3
Query:  432 SMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKKPRVAWSCW-GLHTSWLAFLWQNAWGFLVDG-FCPLQGFYLPISLGGFQKGTRPI 794
            S++ S DVLA++S+EVDLS+I  G TVTVKW+GKPVFI  RT + I  A +V +  L DP+ D  RVK     W    G+ T        N   +  DG FCP  G     S G  ++G  P+
Sbjct:   40 SLNPSADVLALSSIEVDLSNIAVGQTVTVKWQGKPVFITNRTPDKIAEARAVKMSELIDPEADQARVKAGHDNWLVTIGICTHLGCVPLANQGEY--DGWFCPCHGSQYD-SSGRVRRGPAPL 159          
BLAST of EY692366 vs. ExPASy Swiss-Prot
Match: UCRI_RHOSH (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rhodobacter sphaeroides GN=petA PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.985e-14
Identity = 57/163 (34.97%), Postives = 74/163 (45.40%), Query Frame = 3
Query:  342 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQ------------QDAERVKKPRVAW-SCWGLHTSWLAFLWQNAWGFLVDGFCPLQGFYLPISLGGFQKGTRP 791
            ++R F Y+   G   V        +   +  M+ S DV A+AS+ VD+SS+EPG  +TVK+ GKP+FIRRRTE DI+L  SV LG L D               D  R       W   WG+ T           G     FCP  G +   S G  +KG  P
Sbjct:   10 TRRDFLYYATAGAGAVATGAA---VWPLINQMNPSADVQALASIFVDVSSVEPGVQLTVKFLGKPIFIRRRTEADIELGRSVQLGQLVDTNARNANIDAGAEATDQNRTLDEAGEWLVMWGVCTHLGCVPIGGVSGDFGGWFCPCHGSHYD-SAGRIRKGPAP 168          
BLAST of EY692366 vs. ExPASy Swiss-Prot
Match: UCRI_RHOVI (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rhodopseudomonas viridis GN=petA PE=3 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 4.956e-13
Identity = 51/158 (32.28%), Postives = 76/158 (48.10%), Query Frame = 3
Query:  336 DPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAM-ASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKKPRVAW-----SCWGLHTSWLAFLWQNAWGFLVDGFCPLQGFYLPISLGGFQKGTRP 791
            + ++R F Y        V A+ +  +   F+  M+     +A  A +++D+S +  G  V V WRGKP+FIR RT ++I+   + D+G+L DPQ D+ RVK  +  W     SC   H   +    Q  WG     FCP  G     S G  +KG  P
Sbjct:    8 EATRRDFLYVATAA---VGAAGVAAVAWPFITQMNPDAATIAAGAPIDIDISPVTEGQIVRVFWRGKPIFIRHRTAKEIQSEEAADVGALIDPQPDSARVKPGKAEWLVVYASC--THLGCIPLGHQGDWG---GWFCPCHGSQYDAS-GRVRKGPAP 156          
BLAST of EY692366 vs. ExPASy Swiss-Prot
Match: UCRI_BRAJA (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Bradyrhizobium japonicum GN=petA PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.622e-12
Identity = 41/106 (38.68%), Postives = 55/106 (51.89%), Query Frame = 3
Query:  339 PSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAM-ASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKKPRVAW 653
            P++R F  FV TG          L    F+  M+     +A  A +EVDLS I  G  + V WRGKP++I  RT++ I  A +V++ SL DPQ D  RVK     W
Sbjct:   10 PTRRDFL-FVATGAAAAVGGAAALW--PFISQMNPDASTIAAGAPIEVDLSPIAEGQDIKVFWRGKPIYISHRTKKQIDEARAVNVASLPDPQSDEARVKSGHEQW 112          

HSP 2 Score: 25.7942 bits (55), Expect = 3.622e-12
Identity = 9/13 (69.23%), Postives = 11/13 (84.62%), Query Frame = 1
Query:  643 EWLGVVGGCTHLG 681
            +WL V+G CTHLG
Sbjct:  111 QWLVVIGICTHLG 123          
The following BLAST results are available for this feature:
BLAST of EY692366 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
UCRI_RICBR4.054e-1536.14Ubiquinol-cytochrome c reductase iron-sulfur subun... [more]
UCRI_RICTY6.768e-1552.70Ubiquinol-cytochrome c reductase iron-sulfur subun... [more]
UCRI_RICPR1.180e-1440.94Ubiquinol-cytochrome c reductase iron-sulfur subun... [more]
UCRI_RICFE9.985e-1442.28Ubiquinol-cytochrome c reductase iron-sulfur subun... [more]
UCRI_RICCN9.985e-1442.28Ubiquinol-cytochrome c reductase iron-sulfur subun... [more]
UCRI_RHOSH9.985e-1434.97Ubiquinol-cytochrome c reductase iron-sulfur subun... [more]
UCRI_RHOVI4.956e-1332.28Ubiquinol-cytochrome c reductase iron-sulfur subun... [more]
UCRI_BRAJA3.622e-1238.68Ubiquinol-cytochrome c reductase iron-sulfur subun... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-059-F08-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692366 ID=EY692366; Name=EY692366; organism=Citrus sinensis; type=EST; length=940bp
CCCACGCGTCCGAGATGTTGAGGGTCGCGGCGAGAAGGCTCTTATCACCA
TCCTCATCATCGTCATTGAGGCCCATGGCATCGTCTCGGAATATAATTAA
CGGCGCCGGTTCATCGTCCTCCTCCAACGATGATTTCAGATCCAACGGCT
TCTATGGCTCCGGATATCTTGGACCTCAGTTTCAACTTCCTTGCCGAGCT
TTTTCTTCTGAGTCACTGACACCAAGAAATGAAGAAAGCCTGGTTCCAGG
TGTTCCAGCAACAGTGGCAGCTGTTAAGAATCCCACTTCTAAGATAGTAT
ATGATGAATACAATCATGAACGTTATCCTCCAGGTGACCCCAGCAAGCGG
GCATTTGCCTACTTTGTCCTGACTGGTGGTAGGTTTGTGTACGCTTCACT
CATCCGTCTACTTATCCTTAAATTTGTACTGAGCATGTCAGCGAGTAAGG
ATGTTCTTGCTATGGCCTCTCTTGAGGTTGATCTGTCCAGCATTGAGCCA
GGCAGCACAGTGACTGTTAAGTGGCGAGGCAAGCCAGTTTTCATCAGACG
TCGGACTGAGGAAGATATCAAGCTGGCCAACAGTGTTGATTTGGGATCTC
TTCGTGATCCTCAGCAAGACGCTGAGAGGGTTAAAAAACCCAGAGTGGCT
TGGAGTTGTTGGGGGCTGCACACATCTTGGTTGGCATTTCTTTGGCAAAA
TGCTTGGGGATTTTTGGTGGATGGGTTTTGCCCTTTGCAAGGGTTTTACT
TACCAATTTCTCTGGGTGGTTTCCAAAAGGGGACCAGGCCCATAATATTT
TGGAAGATCCCCTCTTAATCCTTTCCTGGGAAAAGAACATGATGGACCCT
TGGGGTTGATAATGGGTAGGACCTTCTGGACGCTGGGAATCCGGGGGTGA
TTAGGAGGGTTTCAGTAATTTTTTTTTTTTGTATCAAGTT
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