EY692193

Overview
NameEY692193
Unique NameEY692193
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length529
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692193 vs. ExPASy Swiss-Prot
Match: EXPA1_ORYSJ (Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXPA1 PE=2 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 5.277e-26
Identity = 54/92 (58.70%), Postives = 64/92 (69.57%), Query Frame = 1
Query:   40 GIRFTIDGSDIFISALISNVAGAGDVVAVKIKGSRTGWLPMGRNWGQNWHINANLKNQPLSFEVTTSDGLTVTSYNVAPKNWNFGQTFEGKQ 315
            G+RFTI+G D F   L+SNV G G + +V IKGSRTGW+ M RNWG NW  NA L  Q LSF+VT+SDG T+T  +VAP  W FGQTF   Q
Sbjct:  167 GVRFTINGRDYFELVLVSNVGGVGSIQSVSIKGSRTGWMAMSRNWGVNWQSNAYLDGQSLSFKVTSSDGQTLTFLDVAPAGWTFGQTFSTSQ 258          
BLAST of EY692193 vs. ExPASy Swiss-Prot
Match: EXPA6_ARATH (Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 6.892e-26
Identity = 53/93 (56.99%), Postives = 67/93 (72.04%), Query Frame = 1
Query:   40 GIRFTIDGSDIFISALISNVAGAGDVVAVKIKGSRTGWLPMGRNWGQNWHINANLKNQPLSFEVTTSDGLTVTSYNVAPKNWNFGQTFEGKQF 318
            GIRFTI+G   F   L++NVAGAG++V + +KG+ T W+ M RNWGQNW  N+ L  Q LSF VT+SD  + TS+N+AP NW FGQTF GK F
Sbjct:  163 GIRFTINGFRYFNLVLVTNVAGAGNIVRLGVKGTHTSWMTMSRNWGQNWQSNSVLVGQSLSFRVTSSDRRSSTSWNIAPANWKFGQTFMGKNF 255          
BLAST of EY692193 vs. ExPASy Swiss-Prot
Match: EXP22_ARATH (Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 1.697e-24
Identity = 49/91 (53.85%), Postives = 64/91 (70.33%), Query Frame = 1
Query:   40 GIRFTIDGSDIFISALISNVAGAGDVVAVKIKGSRTGWLPMGRNWGQNWHINANLKNQPLSFEVTTSDGLTVTSYNVAPKNWNFGQTFEGK 312
            G++F   G+  F+  LI NV GAGD+  V++KG++TGW+ M +NWGQNW     L  Q LSF VTTSDG+T   +NV PKNW FGQTF+G+
Sbjct:  180 GVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKGNKTGWITMKKNWGQNWTTITVLTGQGLSFRVTTSDGITKDFWNVMPKNWGFGQTFDGR 270          
BLAST of EY692193 vs. ExPASy Swiss-Prot
Match: EXPA6_ORYSJ (Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXPA6 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 3.782e-24
Identity = 53/102 (51.96%), Postives = 67/102 (65.69%), Query Frame = 1
Query:   31 RVRGIRFTIDGSDIFISALISNVAGAGDVVAVKIKGSRTG------WLPMGRNWGQNWHINANLKNQPLSFEVTTSDGLTVTSYNVAPKNWNFGQTFEGKQF 318
            R  G+RFT++G   F   L++NV GAGDV ++ +KGS +G      W PM RNWGQNW  NA L  + LSF VT  DG ++T  +VAP  W FGQTFEG+QF
Sbjct:  158 RKGGVRFTVNGHAYFNLVLVTNVGGAGDVRSLAVKGSGSGSRVGGRWQPMSRNWGQNWQSNAYLDGKALSFRVTAGDGRSLTCADVAPAGWQFGQTFEGRQF 259          
BLAST of EY692193 vs. ExPASy Swiss-Prot
Match: EXP26_ARATH (Putative expansin-A26 OS=Arabidopsis thaliana GN=EXPA26 PE=3 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 4.939e-24
Identity = 48/91 (52.75%), Postives = 64/91 (70.33%), Query Frame = 1
Query:   40 GIRFTIDGSDIFISALISNVAGAGDVVAVKIKGSRTGWLPMGRNWGQNWHINANLKNQPLSFEVTTSDGLTVTSYNVAPKNWNFGQTFEGK 312
            G++F   G+  F+  LI NV GAGD+  V++K ++TGW+ M +NWGQNW  +  L  Q LSF VTT+DG+T   +NV PKNW FGQTF+GK
Sbjct:  186 GVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKENKTGWITMKKNWGQNWTTSTVLTGQGLSFRVTTTDGITKDFWNVMPKNWGFGQTFDGK 276          
BLAST of EY692193 vs. ExPASy Swiss-Prot
Match: EXP25_ARATH (Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 6.450e-24
Identity = 48/94 (51.06%), Postives = 62/94 (65.96%), Query Frame = 1
Query:   31 RVRGIRFTIDGSDIFISALISNVAGAGDVVAVKIKGSRTGWLPMGRNWGQNWHINANLKNQPLSFEVTTSDGLTVTSYNVAPKNWNFGQTFEGK 312
            R  G++F   G+  F+  L  NV GAGD+  +++KG +TGW+ M +NWGQNW    NL  Q +SF VTTSDG+T    NV P NW FGQTF+GK
Sbjct:  180 RTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNWGFGQTFDGK 273          
BLAST of EY692193 vs. ExPASy Swiss-Prot
Match: EXP23_ARATH (Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 6.450e-24
Identity = 48/94 (51.06%), Postives = 62/94 (65.96%), Query Frame = 1
Query:   31 RVRGIRFTIDGSDIFISALISNVAGAGDVVAVKIKGSRTGWLPMGRNWGQNWHINANLKNQPLSFEVTTSDGLTVTSYNVAPKNWNFGQTFEGK 312
            R  G++F   G+  F+  L  NV GAGD+  +++KG +TGW+ M +NWGQNW    NL  Q +SF VTTSDG+T    NV P NW FGQTF+GK
Sbjct:  173 RTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNWGFGQTFDGK 266          
BLAST of EY692193 vs. ExPASy Swiss-Prot
Match: EXP21_ORYSJ (Expansin-A21 OS=Oryza sativa subsp. japonica GN=EXPA21 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 8.425e-24
Identity = 56/99 (56.57%), Postives = 63/99 (63.64%), Query Frame = 1
Query:   31 RVRGIRFTIDGSDIFISALISNVAGAGDVVAVKIK---GSRTGWLPMGRNWGQNWHINANLKNQPLSFEVTTSDGLTVTSYNVAPKNWNFGQTFEGKQF 318
            R  G+RFTI+G   F   L+SNV GAGDV AV +K   G +  W  M RNWGQNW   A L  Q LSF VTT D  +V SYNVAP  W FGQTF G+QF
Sbjct:  165 RKGGMRFTINGHSYFNLVLVSNVGGAGDVHAVAVKAGGGRKARWQAMARNWGQNWQSGALLDGQALSFTVTTGDRRSVVSYNVAPAGWAFGQTFTGRQF 263          
BLAST of EY692193 vs. ExPASy Swiss-Prot
Match: EXP12_ORYSJ (Expansin-A12 OS=Oryza sativa subsp. japonica GN=EXPA12 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.877e-23
Identity = 51/97 (52.58%), Postives = 66/97 (68.04%), Query Frame = 1
Query:   31 RVRGIRFTIDGSDIFISALISNVAGAGDVVAVKIKGSRTGWLPMGRNWGQNWHINANLKNQPLSFEVTTSDGLTVTSYNVAPKNWNFGQTF-EGKQF 318
            R  G+RFTI+G+  F   LI+NV G G + +V+IKG++TGW+ M RNWG NW  N  L NQ +SF VT++ G T+   +VAP NW FGQTF  G QF
Sbjct:  153 RKGGVRFTINGNSYFELVLITNVGGPGSIKSVQIKGTKTGWVTMSRNWGANWQANNYLNNQAISFSVTSTAGKTLVFEDVAPSNWQFGQTFTSGVQF 249          
BLAST of EY692193 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 3.201e-23
Identity = 51/92 (55.43%), Postives = 61/92 (66.30%), Query Frame = 1
Query:   31 RVRGIRFTIDGSDIFISALISNVAGAGDVVAVKIKGSRTGWLPMGRNWGQNWHINANLKNQPLSFEVTTSDGLTVTSYNVAPKNWNFGQTFE 306
            RV GIRF I G D +   L++NVAG+G V A  +KGS T WL M RNWG+NW  NA L  Q LSF V   DG  VT+Y+VAP NW FG T++
Sbjct:  156 RVGGIRFGIAGHDYYELVLVTNVAGSGAVAAAWVKGSGTEWLSMSRNWGENWQSNAYLTGQALSFRVQADDGGVVTAYDVAPANWQFGSTYQ 247          
The following BLAST results are available for this feature:
BLAST of EY692193 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
EXPA1_ORYSJ5.277e-2658.70Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA6_ARATH6.892e-2656.99Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 ... [more]
EXP22_ARATH1.697e-2453.85Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=... [more]
EXPA6_ORYSJ3.782e-2451.96Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP26_ARATH4.939e-2452.75Putative expansin-A26 OS=Arabidopsis thaliana GN=E... [more]
EXP25_ARATH6.450e-2451.06Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=... [more]
EXP23_ARATH6.450e-2451.06Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=... [more]
EXP21_ORYSJ8.425e-2456.57Expansin-A21 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP12_ORYSJ1.877e-2352.58Expansin-A12 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPA9_ORYSJ3.201e-2355.43Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXP... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-098-A05-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692193 ID=EY692193; Name=EY692193; organism=Citrus sinensis; type=EST; length=529bp
GGGTTCCGGGAATTTCCCGAGGTCGACCCACGCGTCCGAGGCATTCGATT
TACGATTGATGGTTCGGATATCTTCATTTCAGCGTTGATCAGCAATGTAG
CAGGTGCTGGAGATGTAGTTGCAGTGAAGATCAAGGGTTCAAGAACCGGT
TGGCTTCCAATGGGTCGGAATTGGGGCCAAAACTGGCACATAAATGCCAA
TCTGAAAAATCAACCTCTCTCATTTGAGGTCACCACTAGTGATGGCCTCA
CGGTTACATCTTATAATGTTGCTCCTAAGAATTGGAACTTTGGGCAGACC
TTTGAAGGCAAACAATTTGAGTCTTAGATTAGCACCAATAGCTTAATTAA
TTAAGTATACAGAAGAAGGTTTTTTTTTTTTTTTTGGTTGTATTCGGGTG
GAAGGTGTATGGTGGGTTTTTCTATGGCTGGGAAGATACTATTCTTCAAG
ATGTAATGATTCAGTGAATTATTGTGATTTTTGTACCTCTGTTTTGTTCC
ACAAACAATATAAAAACAAACATGAGATA
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