EY692193
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY692193 vs. ExPASy Swiss-Prot
Match: EXPA1_ORYSJ (Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXPA1 PE=2 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 5.277e-26 Identity = 54/92 (58.70%), Postives = 64/92 (69.57%), Query Frame = 1 Query: 40 GIRFTIDGSDIFISALISNVAGAGDVVAVKIKGSRTGWLPMGRNWGQNWHINANLKNQPLSFEVTTSDGLTVTSYNVAPKNWNFGQTFEGKQ 315 G+RFTI+G D F L+SNV G G + +V IKGSRTGW+ M RNWG NW NA L Q LSF+VT+SDG T+T +VAP W FGQTF Q Sbjct: 167 GVRFTINGRDYFELVLVSNVGGVGSIQSVSIKGSRTGWMAMSRNWGVNWQSNAYLDGQSLSFKVTSSDGQTLTFLDVAPAGWTFGQTFSTSQ 258
BLAST of EY692193 vs. ExPASy Swiss-Prot
Match: EXPA6_ARATH (Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 6.892e-26 Identity = 53/93 (56.99%), Postives = 67/93 (72.04%), Query Frame = 1 Query: 40 GIRFTIDGSDIFISALISNVAGAGDVVAVKIKGSRTGWLPMGRNWGQNWHINANLKNQPLSFEVTTSDGLTVTSYNVAPKNWNFGQTFEGKQF 318 GIRFTI+G F L++NVAGAG++V + +KG+ T W+ M RNWGQNW N+ L Q LSF VT+SD + TS+N+AP NW FGQTF GK F Sbjct: 163 GIRFTINGFRYFNLVLVTNVAGAGNIVRLGVKGTHTSWMTMSRNWGQNWQSNSVLVGQSLSFRVTSSDRRSSTSWNIAPANWKFGQTFMGKNF 255
BLAST of EY692193 vs. ExPASy Swiss-Prot
Match: EXP22_ARATH (Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 1.697e-24 Identity = 49/91 (53.85%), Postives = 64/91 (70.33%), Query Frame = 1 Query: 40 GIRFTIDGSDIFISALISNVAGAGDVVAVKIKGSRTGWLPMGRNWGQNWHINANLKNQPLSFEVTTSDGLTVTSYNVAPKNWNFGQTFEGK 312 G++F G+ F+ LI NV GAGD+ V++KG++TGW+ M +NWGQNW L Q LSF VTTSDG+T +NV PKNW FGQTF+G+ Sbjct: 180 GVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKGNKTGWITMKKNWGQNWTTITVLTGQGLSFRVTTSDGITKDFWNVMPKNWGFGQTFDGR 270
BLAST of EY692193 vs. ExPASy Swiss-Prot
Match: EXPA6_ORYSJ (Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXPA6 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 3.782e-24 Identity = 53/102 (51.96%), Postives = 67/102 (65.69%), Query Frame = 1 Query: 31 RVRGIRFTIDGSDIFISALISNVAGAGDVVAVKIKGSRTG------WLPMGRNWGQNWHINANLKNQPLSFEVTTSDGLTVTSYNVAPKNWNFGQTFEGKQF 318 R G+RFT++G F L++NV GAGDV ++ +KGS +G W PM RNWGQNW NA L + LSF VT DG ++T +VAP W FGQTFEG+QF Sbjct: 158 RKGGVRFTVNGHAYFNLVLVTNVGGAGDVRSLAVKGSGSGSRVGGRWQPMSRNWGQNWQSNAYLDGKALSFRVTAGDGRSLTCADVAPAGWQFGQTFEGRQF 259
BLAST of EY692193 vs. ExPASy Swiss-Prot
Match: EXP26_ARATH (Putative expansin-A26 OS=Arabidopsis thaliana GN=EXPA26 PE=3 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 4.939e-24 Identity = 48/91 (52.75%), Postives = 64/91 (70.33%), Query Frame = 1 Query: 40 GIRFTIDGSDIFISALISNVAGAGDVVAVKIKGSRTGWLPMGRNWGQNWHINANLKNQPLSFEVTTSDGLTVTSYNVAPKNWNFGQTFEGK 312 G++F G+ F+ LI NV GAGD+ V++K ++TGW+ M +NWGQNW + L Q LSF VTT+DG+T +NV PKNW FGQTF+GK Sbjct: 186 GVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKENKTGWITMKKNWGQNWTTSTVLTGQGLSFRVTTTDGITKDFWNVMPKNWGFGQTFDGK 276
BLAST of EY692193 vs. ExPASy Swiss-Prot
Match: EXP25_ARATH (Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 6.450e-24 Identity = 48/94 (51.06%), Postives = 62/94 (65.96%), Query Frame = 1 Query: 31 RVRGIRFTIDGSDIFISALISNVAGAGDVVAVKIKGSRTGWLPMGRNWGQNWHINANLKNQPLSFEVTTSDGLTVTSYNVAPKNWNFGQTFEGK 312 R G++F G+ F+ L NV GAGD+ +++KG +TGW+ M +NWGQNW NL Q +SF VTTSDG+T NV P NW FGQTF+GK Sbjct: 180 RTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNWGFGQTFDGK 273
BLAST of EY692193 vs. ExPASy Swiss-Prot
Match: EXP23_ARATH (Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=2 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 6.450e-24 Identity = 48/94 (51.06%), Postives = 62/94 (65.96%), Query Frame = 1 Query: 31 RVRGIRFTIDGSDIFISALISNVAGAGDVVAVKIKGSRTGWLPMGRNWGQNWHINANLKNQPLSFEVTTSDGLTVTSYNVAPKNWNFGQTFEGK 312 R G++F G+ F+ L NV GAGD+ +++KG +TGW+ M +NWGQNW NL Q +SF VTTSDG+T NV P NW FGQTF+GK Sbjct: 173 RTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNWGFGQTFDGK 266
BLAST of EY692193 vs. ExPASy Swiss-Prot
Match: EXP21_ORYSJ (Expansin-A21 OS=Oryza sativa subsp. japonica GN=EXPA21 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 8.425e-24 Identity = 56/99 (56.57%), Postives = 63/99 (63.64%), Query Frame = 1 Query: 31 RVRGIRFTIDGSDIFISALISNVAGAGDVVAVKIK---GSRTGWLPMGRNWGQNWHINANLKNQPLSFEVTTSDGLTVTSYNVAPKNWNFGQTFEGKQF 318 R G+RFTI+G F L+SNV GAGDV AV +K G + W M RNWGQNW A L Q LSF VTT D +V SYNVAP W FGQTF G+QF Sbjct: 165 RKGGMRFTINGHSYFNLVLVSNVGGAGDVHAVAVKAGGGRKARWQAMARNWGQNWQSGALLDGQALSFTVTTGDRRSVVSYNVAPAGWAFGQTFTGRQF 263
BLAST of EY692193 vs. ExPASy Swiss-Prot
Match: EXP12_ORYSJ (Expansin-A12 OS=Oryza sativa subsp. japonica GN=EXPA12 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.877e-23 Identity = 51/97 (52.58%), Postives = 66/97 (68.04%), Query Frame = 1 Query: 31 RVRGIRFTIDGSDIFISALISNVAGAGDVVAVKIKGSRTGWLPMGRNWGQNWHINANLKNQPLSFEVTTSDGLTVTSYNVAPKNWNFGQTF-EGKQF 318 R G+RFTI+G+ F LI+NV G G + +V+IKG++TGW+ M RNWG NW N L NQ +SF VT++ G T+ +VAP NW FGQTF G QF Sbjct: 153 RKGGVRFTINGNSYFELVLITNVGGPGSIKSVQIKGTKTGWVTMSRNWGANWQANNYLNNQAISFSVTSTAGKTLVFEDVAPSNWQFGQTFTSGVQF 249
BLAST of EY692193 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 3.201e-23 Identity = 51/92 (55.43%), Postives = 61/92 (66.30%), Query Frame = 1 Query: 31 RVRGIRFTIDGSDIFISALISNVAGAGDVVAVKIKGSRTGWLPMGRNWGQNWHINANLKNQPLSFEVTTSDGLTVTSYNVAPKNWNFGQTFE 306 RV GIRF I G D + L++NVAG+G V A +KGS T WL M RNWG+NW NA L Q LSF V DG VT+Y+VAP NW FG T++ Sbjct: 156 RVGGIRFGIAGHDYYELVLVTNVAGSGAVAAAWVKGSGTEWLSMSRNWGENWQSNAYLTGQALSFRVQADDGGVVTAYDVAPANWQFGSTYQ 247 The following BLAST results are available for this feature:
BLAST of EY692193 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >EY692193 ID=EY692193; Name=EY692193; organism=Citrus sinensis; type=EST; length=529bpback to top |