EY692193
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY692193 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 5.289e-18 Identity = 44/102 (43.14%), Postives = 62/102 (60.78%), Query Frame = 1 Query: 4 FREFPEVDPRVRGIRFTIDGSDIFISALISNVAGAGDVVAVKIKGS-RTGWLPMGRNWGQNWHINANLKNQPLSFEVTTSDGLTVTSYNVAPKNWNFGQTFE 306 +R P V +V GIR+TI G+ F ++SNV GAGDV + +KG+ R W P+ RNWGQ W + L + L+F V T D TS++V P +W FG T++ Sbjct: 164 YRRVPCV--KVGGIRYTITGNPYFNLVMVSNVGGAGDVAGLSVKGNKRVKWTPLKRNWGQEWQTSEVLTGESLTFRVMTGDHRKATSWHVLPPDWQFGVTYQ 263
BLAST of EY692193 vs. ExPASy Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 6.908e-18 Identity = 41/88 (46.59%), Postives = 57/88 (64.77%), Query Frame = 1 Query: 40 GIRFTIDGSDIFISALISNVAGAGDVVAVKIKGSRTGWLPMGRNWGQNWHINANLKNQPLSFEVTTSDGLTVTSYNVAPKNWNFGQTF 303 G+RFT+ G + F LISNVAG+G + +V +KG T +P+ RNWG NW +A L Q L+F VT++ G T+ N+ P W FGQ+F Sbjct: 165 GVRFTMGGFNYFELVLISNVAGSGSIQSVWVKGPNTDRMPLSRNWGANWQSHAGLVGQTLTFGVTSTGGQTLVFQNIVPAWWKFGQSF 252
BLAST of EY692193 vs. ExPASy Swiss-Prot
Match: EXP13_ORYSJ (Expansin-A13 OS=Oryza sativa subsp. japonica GN=EXPA13 PE=2 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 6.908e-18 Identity = 43/89 (48.31%), Postives = 55/89 (61.80%), Query Frame = 1 Query: 40 GIRFTIDGSDIFISALISNVAGAGDVVAVKIKGSRT-GWLPMGRNWGQNWHINANLKNQPLSFEVTTSDGLTVTSYNVAPKNWNFGQTF 303 G+RFTI+G D F L++NV AG + A+ +KGS++ W+ M NWG WH A L Q LSF VT +DG T+ NV W FGQTF Sbjct: 167 GVRFTINGHDYFQLVLLTNVGAAGSIKAMDVKGSKSPDWMAMAHNWGAQWHSLAYLTGQGLSFRVTITDGQTLVFPNVVRPGWRFGQTF 255
BLAST of EY692193 vs. ExPASy Swiss-Prot
Match: EXP26_ORYSJ (Expansin-A26 OS=Oryza sativa subsp. japonica GN=EXPA26 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.178e-17 Identity = 40/96 (41.67%), Postives = 60/96 (62.50%), Query Frame = 1 Query: 31 RVRGIRFTIDGSDIFISALISNVAGAGDVVAVKIKGS-RTGWLPMGRNWGQNWHINANLKNQPLSFEVTTSDGLTVTSYNVAPKNWNFGQTFEGKQ 315 R GI++TI G+ + ++ NV GAGDVV + +KG+ R W P+ R+WGQ W ANL + L+F V T D TS+ VAP++W + T++ K+ Sbjct: 193 RQGGIKYTITGNPSYNMVMVKNVGGAGDVVKLTVKGTKRVKWTPLQRSWGQLWKTEANLTGESLTFRVMTGDHRKATSWRVAPRDWTYDNTYQAKK 288
BLAST of EY692193 vs. ExPASy Swiss-Prot
Match: EXP24_ARATH (Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=2 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 7.637e-17 Identity = 43/95 (45.26%), Postives = 60/95 (63.16%), Query Frame = 1 Query: 31 RVRGIRFTIDGSDIFISALISNVAGAGDVVAVKIKGSRTGWLPMGRNWGQNWHINANLKNQPLSFEVTTSDGLTVTSYNVAPKNWNF-GQTFEGK 312 ++ G++F I G+ F+ L NV GAG V A++IKG+RT W+ M +NWGQ W L Q LSF +TTSDG+ +V P +W GQ+F+GK Sbjct: 215 KIGGVKFEIKGNPHFLMILPYNVGGAGAVRAMQIKGTRTQWIAMKKNWGQIWSTGVVLTGQCLSFRLTTSDGVMKEFIDVTPPDWKCNGQSFDGK 309
BLAST of EY692193 vs. ExPASy Swiss-Prot
Match: EXPA7_ARATH (Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.222e-16 Identity = 38/93 (40.86%), Postives = 61/93 (65.59%), Query Frame = 1 Query: 31 RVRGIRFTIDGSDIFISALISNVAGAGDVVAVKIKGSRTGWLPMGRNWGQNWHINANLKNQPLSFEVTT-SDGLTVTSYNVAPKNWNFGQTFE 306 R G+RF G+ ++ + NV GAGD+ ++ +KGSRT W+ M NWG ++ ++L Q LSF VT+ + G T+ ++NVAP NW+ G+T++ Sbjct: 164 RSGGMRFQFQGNSYWLLIFVMNVGGAGDIKSMAVKGSRTNWISMSHNWGASYQAFSSLYGQSLSFRVTSYTTGETIYAWNVAPANWSGGKTYK 256
BLAST of EY692193 vs. ExPASy Swiss-Prot
Match: EXP18_ARATH (Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.790e-16 Identity = 36/95 (37.89%), Postives = 61/95 (64.21%), Query Frame = 1 Query: 31 RVRGIRFTIDGSDIFISALISNVAGAGDVVAVKIKGSRTGWLPMGRNWGQNWHINANLKNQPLSFEVTT-SDGLTVTSYNVAPKNWNFGQTFEGK 312 ++ GIRF +G+ ++ + NV G GD+ + +KGSRTGW+ M NWG ++ ++L Q LSF +T+ + T+ +YN AP +W+ G+T++ K Sbjct: 159 KIGGIRFKFEGNGYWLLVYVMNVGGPGDIKTMAVKGSRTGWINMSHNWGASYQAFSSLYGQSLSFRLTSYTTRQTIYAYNAAPASWSAGKTYQSK 253
BLAST of EY692193 vs. ExPASy Swiss-Prot
Match: EXP30_ORYSJ (Putative expansin-A30 OS=Oryza sativa subsp. japonica GN=EXPA30 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.003e-13 Identity = 38/96 (39.58%), Postives = 58/96 (60.42%), Query Frame = 1 Query: 31 RVRGIRFTIDGSDIFISALISNVAGAGDVVAVKIK-GSRTGWLPMGRNWGQNWHINANLKNQPLSFEVTT-SDGLTVTSYNVAPKNWNFGQTFEGK 312 R G+RF + G+ ++ A + NVAGAGDV + +K G GW+ M NWG ++ A L Q LSF+VT+ + G T+ + V P +W FG T++ + Sbjct: 167 RAGGLRFALQGNPYWLLAYVMNVAGAGDVGDMWVKAGGGGGWVRMSHNWGASYQAFAQLGGQALSFKVTSYTTGQTILAAGVTPASWCFGLTYQAR 262 The following BLAST results are available for this feature:
BLAST of EY692193 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >EY692193 ID=EY692193; Name=EY692193; organism=Citrus sinensis; type=EST; length=529bpback to top |