EY692188

Overview
NameEY692188
Unique NameEY692188
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length852
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY692188 vs. ExPASy Swiss-Prot
Match: ACT1_PEA (Actin-1 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 7.419e-58
Identity = 109/113 (96.46%), Postives = 111/113 (98.23%), Query Frame = 2 
Query:   11 QPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 349
            QPS+IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISK EYDE GPSIVHRKCF
Sbjct:  264 QPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDERGPSIVHRKCF 376
[Close]
BLAST of EY692188 vs. ExPASy Swiss-Prot
Match: ACT1_ORYSJ (Actin-1 OS=Oryza sativa subsp. japonica GN=ACT1 PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 7.419e-58
Identity = 109/113 (96.46%), Postives = 111/113 (98.23%), Query Frame = 2 
Query:   11 QPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 349
            QPS IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  265 QPSFIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
[Close]
BLAST of EY692188 vs. ExPASy Swiss-Prot
Match: ACT1_ORYSI (Actin-1 OS=Oryza sativa subsp. indica GN=ACT1 PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 7.419e-58
Identity = 109/113 (96.46%), Postives = 111/113 (98.23%), Query Frame = 2 
Query:   11 QPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 349
            QPS IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  265 QPSFIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
[Close]
BLAST of EY692188 vs. ExPASy Swiss-Prot
Match: ACT1_TOBAC (Actin OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 9.690e-58
Identity = 109/113 (96.46%), Postives = 111/113 (98.23%), Query Frame = 2 
Query:   11 QPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 349
            QPS+IGMEAAGIHETTYNSIMKCDVDIRKDLYG IVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  265 QPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGKIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
[Close]
BLAST of EY692188 vs. ExPASy Swiss-Prot
Match: ACT7_SOLTU (Actin-75 OS=Solanum tuberosum GN=AC75 PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.266e-57
Identity = 109/113 (96.46%), Postives = 111/113 (98.23%), Query Frame = 2 
Query:   11 QPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 349
            QPS IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K E+DESGPSIVHRKCF
Sbjct:  265 QPSTIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEFDESGPSIVHRKCF 377
[Close]
BLAST of EY692188 vs. ExPASy Swiss-Prot
Match: ACT2_PEA (Actin-2 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.653e-57
Identity = 108/113 (95.58%), Postives = 111/113 (98.23%), Query Frame = 2 
Query:   11 QPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 349
            QPS+IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPER+YSVWIGGSILASLSTFQQMWISK EYDE GPSIVHRKCF
Sbjct:  264 QPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERRYSVWIGGSILASLSTFQQMWISKAEYDERGPSIVHRKCF 376
[Close]
BLAST of EY692188 vs. ExPASy Swiss-Prot
Match: ACT3_SOYBN (Actin-3 OS=Glycine max GN=SAC3 PE=3 SV=2)

HSP 1 Score: 222.631 bits (566), Expect = 2.159e-57
Identity = 110/113 (97.35%), Postives = 111/113 (98.23%), Query Frame = 2 
Query:   11 QPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 349
            QPS+I MEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMF GIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF
Sbjct:  264 QPSMIEMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFLGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 376
[Close]
BLAST of EY692188 vs. ExPASy Swiss-Prot
Match: ACT1_ARATH (Actin-1/3 OS=Arabidopsis thaliana GN=ACT1 PE=1 SV=2)

HSP 1 Score: 222.631 bits (566), Expect = 2.159e-57
Identity = 108/113 (95.58%), Postives = 111/113 (98.23%), Query Frame = 2 
Query:   11 QPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 349
            QPS+IGME AGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  265 QPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
[Close]
BLAST of EY692188 vs. ExPASy Swiss-Prot
Match: ACT2_ORYSJ (Actin-2 OS=Oryza sativa subsp. japonica GN=ACT2 PE=2 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.819e-57
Identity = 108/113 (95.58%), Postives = 111/113 (98.23%), Query Frame = 2 
Query:   11 QPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 349
            QPSLIGMEA GIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIS+ EY+ESGP+IVHRKCF
Sbjct:  265 QPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISRAEYEESGPAIVHRKCF 377
[Close]
BLAST of EY692188 vs. ExPASy Swiss-Prot
Match: ACT2_ORYSI (Actin-2 OS=Oryza sativa subsp. indica GN=ACT2 PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.819e-57
Identity = 108/113 (95.58%), Postives = 111/113 (98.23%), Query Frame = 2 
Query:   11 QPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 349
            QPSLIGMEA GIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIS+ EY+ESGP+IVHRKCF
Sbjct:  265 QPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISRAEYEESGPAIVHRKCF 377
The following BLAST results are available for this feature:
BLAST of EY692188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 459
Match NameE-valueIdentityDescription
ACT1_PEA7.419e-5896.46Actin-1 OS=Pisum sativum PE=2 SV=1[more]
ACT1_ORYSJ7.419e-5896.46Actin-1 OS=Oryza sativa subsp. japonica GN=ACT1 PE... [more]
ACT1_ORYSI7.419e-5896.46Actin-1 OS=Oryza sativa subsp. indica GN=ACT1 PE=2... [more]
ACT1_TOBAC9.690e-5896.46Actin OS=Nicotiana tabacum PE=3 SV=1[more]
ACT7_SOLTU1.266e-5796.46Actin-75 OS=Solanum tuberosum GN=AC75 PE=3 SV=1[more]
ACT2_PEA1.653e-5795.58Actin-2 OS=Pisum sativum PE=2 SV=1[more]
ACT3_SOYBN2.159e-5797.35Actin-3 OS=Glycine max GN=SAC3 PE=3 SV=2[more]
ACT1_ARATH2.159e-5795.58Actin-1/3 OS=Arabidopsis thaliana GN=ACT1 PE=1 SV=... [more]
ACT2_ORYSJ2.819e-5795.58Actin-2 OS=Oryza sativa subsp. japonica GN=ACT2 PE... [more]
ACT2_ORYSI2.819e-5795.58Actin-2 OS=Oryza sativa subsp. indica GN=ACT2 PE=3... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-097-H12-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692188 ID=EY692188; Name=EY692188; organism=Citrus sinensis; type=EST; length=852bp
CCCGCGTCCGCAGCCATCTCTCATCGGAATGGAAGCTGCTGGTATTCATG
AGACTACCTACAACTCCATCATGAAGTGTGATGTGGATATTAGAAAGGAT
CTGTATGGTAACATTGTTCTCAGTGGGGGTTCAACTATGTTCCCTGGTAT
TGCCGACCGTATGAGCAAGGAAATCACAGCACTTGCTCCAAGCAGCATGA
AGATCAAGGTCGTGGCTCCACCAGAGAGAAAATACAGTGTTTGGATTGGA
GGATCAATCCTTGCATCCCTCAGCACCTTCCAGCAGATGTGGATCTCAAA
GGGCGAGTATGATGAGTCTGGTCCATCCATTGTCCACAGGAAATGCTTCT
AAGTTCTTTAAGTGCTTGATGGGTGAGTTCTTTTTTTCCATTTAATTGGT
TTTTTGTGTCTCGTTTCGCGAACTCAAGTTGGTTGACATGGAGAAGTGCT
AAGGATGGGGGCATTGAAGGAGGGATATCTCGATATTGATGTTATTATAC
AAGCTTTCTTACGCCGTTTGAGGGGGGCCTTATTTCTGTTCTCCAACCAT
CTTACTAGACTTGCATTTCATCGGGGGTTCAACCAAGTCTTTTTTTAATT
TTTTTTCCCTTTTTTTACGTTAAACAAAGAAAGTTTGTAACCTGGTCAAT
AAAAAGGAGGACCGCCAAGCGCTTGCCTCACTCTCACTACCCACGACCAC
ACGACTTGGACTGGAACCATACAACACCACCATCCTCAAACAGAGAGTCA
AAACGGAAAACAAATAAAGGGAAGACAAAAGGAATTCATACTAAAGTCTC
GCCGTTCACCGGCCAACCGCTCTAAAATATTATAAAAATTGCTGTATGAA
AA
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