EY692139

Overview
NameEY692139
Unique NameEY692139
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692139 vs. ExPASy Swiss-Prot
Match: COQ4_DROPE (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Drosophila persimilis GN=GL15483 PE=3 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 7.236e-29
Identity = 58/137 (42.34%), Postives = 86/137 (62.77%), Query Frame = 3
Query:   39 LPPNTFGAAYASFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFGLPTNLIGESALKVIEFQQMYLPMCFLSVIGGSARFSEKQRKLFFQHYFPWAIRAGMQSTDLMCVYYEQHFHEDLEDLRKKWGI 449
            LP +TFGAAY  F+     +PD R  VRF++  +LAY+  R RE HD  HT+  +PTN++GE A+K +E     LPMC+   + G+ R   KQR+ + +HY PWA+  G Q   LM VY+E+ + +++ +LR + GI
Sbjct:  125 LPADTFGAAYVKFLKDNKVTPDSRMAVRFLEDPKLAYLMTRYRECHDLIHTVLDMPTNMLGEVAVKWVEALNTGLPMCYGGAVFGAVRLRPKQRRAYLKHYLPWALENGKQMKPLMPVYWEERWEQNVNELRAELGI 261          
BLAST of EY692139 vs. ExPASy Swiss-Prot
Match: COQ4_RAT (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Rattus norvegicus GN=Coq4 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.612e-28
Identity = 60/141 (42.55%), Postives = 83/141 (58.87%), Query Frame = 3
Query:   39 LPPNTFGAAYASFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFGLPTNLIGESALKVIEFQQMYLPMCFLSVIGGSARFSEKQRKLFFQHYFPWAIRAGMQSTDLMCVYYEQHFHEDLEDLRKKWGIVPSP 461
            LP  + G  Y  F+ +   SPD R P RF+D +ELAYV  R REVHD  HTL G+PTN++GE  +K  E  Q  LPMC L  + G  R   +  ++ F    PWAI+ G ++  ++ +YYEQ + + L  LR++ GI P P
Sbjct:  118 LPEGSLGREYLRFLNANKVSPDTRAPTRFVDDEELAYVIQRYREVHDMLHTLLGMPTNMLGEVVVKWFEAVQTGLPMCILGALFGPVRLRAQSLQVLFSELIPWAIQNGRRAPCVLNIYYEQRWEQPLTALREELGISPPP 258          
BLAST of EY692139 vs. ExPASy Swiss-Prot
Match: COQ4_MOUSE (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Mus musculus GN=Coq4 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.126e-28
Identity = 60/141 (42.55%), Postives = 82/141 (58.16%), Query Frame = 3
Query:   39 LPPNTFGAAYASFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFGLPTNLIGESALKVIEFQQMYLPMCFLSVIGGSARFSEKQRKLFFQHYFPWAIRAGMQSTDLMCVYYEQHFHEDLEDLRKKWGIVPSP 461
            LP  + G  Y  F+     SPD R P RF+D +ELAYV  R REVHD  HTL G+PTN++GE  +K  E  Q  LPMC L  + G  R   +  ++ F    PWAI+ G ++  ++ +YYEQ + + L  LR++ GI P P
Sbjct:  119 LPEGSLGREYLRFLDVNKVSPDTRAPTRFVDDEELAYVIQRYREVHDMLHTLLGMPTNMLGEVVVKWFEAVQTGLPMCILGALFGPIRLRTQSLQVLFSELIPWAIQNGRRAPCVLNIYYEQRWEQPLTALREELGISPPP 259          
BLAST of EY692139 vs. ExPASy Swiss-Prot
Match: COQ41_CULQU (Ubiquinone biosynthesis protein COQ4 homolog 1, mitochondrial OS=Culex quinquefasciatus GN=CPIJ006564 PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.365e-27
Identity = 60/137 (43.80%), Postives = 85/137 (62.04%), Query Frame = 3
Query:   39 LPPNTFGAAYASFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFGLPTNLIGESALKVIEFQQMYLPMCFLSVIGGSARFSEKQRKLFFQHYFPWAIRAGMQSTDLMCVYYEQHFHEDLEDLRKKWGI 449
            LP  +FG  Y  F+   + +PD R  VRFMD  ELAYV  R REVHD  HT+ G+PTN++GE A+K +E     LPMC+   + G+      QR+ + +HY PWA+R G Q   LM VY+E+ + +D+ +LR++  I
Sbjct:  132 LPETSFGHQYVHFLEKHDITPDSRAEVRFMDDPELAYVMTRYREVHDLVHTVLGMPTNMLGEVAVKWVEALNTGLPMCYGGAVFGA------QRQNYLRHYLPWALRMGRQVRPLMNVYWEKRWEQDMAELRQELNI 262          
BLAST of EY692139 vs. ExPASy Swiss-Prot
Match: COQ4_PICGU (Ubiquinone biosynthesis protein COQ4, mitochondrial OS=Pichia guilliermondii GN=COQ4 PE=3 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.782e-27
Identity = 58/141 (41.13%), Postives = 86/141 (60.99%), Query Frame = 3
Query:   39 LPPNTFGAAYASFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFGLPTNLIGESALKVIEFQQMYLPMCFLSVIGGSARFSEKQRKLFFQHYFPWAIRAGMQSTDLMCVYYEQHFHEDLEDLRKKWGIVPSP 461
            LP NT G+AY  ++     SPD R PVR++D +ELAY+  R RE HDF+H + GLP  + GE A+KV+EF  + +PM  L  +    R   KQR+  +  Y+PWA ++G+ S  L+ VY+E+   +D+ + R+  GI   P
Sbjct:  152 LPKNTIGSAYIQWLDREGVSPDTRVPVRYIDDEELAYIYQRYRECHDFYHAITGLPIIIEGEIAVKVLEFTNIGIPMSGLGGLFAPLRLRPKQRERLYGIYYPWAFKSGLNSKPLINVYWEKILEQDINEFRRDMGIEQPP 292          
BLAST of EY692139 vs. ExPASy Swiss-Prot
Match: COQ4_DROVI (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Drosophila virilis GN=GJ13024 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.782e-27
Identity = 57/139 (41.01%), Postives = 84/139 (60.43%), Query Frame = 3
Query:   39 LPPNTFGAAYASFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFGLPTNLIGESALKVIEFQQMYLPMCFLSVIGGSARFSEKQRKLFFQHYFPWAIRAGMQSTDLMCVYYEQHFHEDLEDLRKKWGIVP 455
            LPPNTFGA YA F+     +PD R  VRF++  +LAY+  R RE HD  H    +PTN++ E A+K +E     LPMC+ + + G+ R   +QR+ + + Y PWAI  G     LM +Y+EQ + +++ +LR + GI P
Sbjct:  125 LPPNTFGATYAKFLKDNKVTPDSRMEVRFLEDPKLAYIMTRYRECHDLVHAALDMPTNMLCEVAVKWVEALNTGLPMCYGAAVFGAVRLRPRQRREYLKRYLPWAIENGKGMRPLMPIYWEQRWEQNIHELRCELGIKP 263          
BLAST of EY692139 vs. ExPASy Swiss-Prot
Match: COQ4_XENTR (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Xenopus tropicalis GN=coq4 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.328e-27
Identity = 60/142 (42.25%), Postives = 87/142 (61.27%), Query Frame = 3
Query:   36 DLPPNTFGAAYASFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFGLPTNLIGESALKVIEFQQMYLPMCFLSVIGGSARFSEKQRKLFFQHYFPWAIRAGMQSTDLMCVYYEQHFHEDLEDLRKKWGIVPSP 461
            ++P  TFG  YA F+   + +PD R PV+F+D +ELAYVA R REVHD  HTL G+PTN++GE  +K  E  Q  LPMC L    G  R + K+ K       PWA+++G  +  ++  YYE+ + + +  LR++ GI+P P
Sbjct:  136 EMPDGTFGREYARFLDVNHVTPDTRMPVKFVDDEELAYVAQRYREVHDLMHTLLGMPTNMLGEVVVKWFEAVQTGLPMCILGAAFGPLRLNNKRMKK-LGVLVPWAVQSGRNARCVLNFYYEKRWGQSVASLREEIGILPPP 276          
BLAST of EY692139 vs. ExPASy Swiss-Prot
Match: COQ4_CLAL4 (Ubiquinone biosynthesis protein COQ4, mitochondrial OS=Clavispora lusitaniae (strain ATCC 42720) GN=COQ4 PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.040e-27
Identity = 60/145 (41.38%), Postives = 84/145 (57.93%), Query Frame = 3
Query:   27 HAWDLPPNTFGAAYASFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFGLPTNLIGESALKVIEFQQMYLPMCFLSVIGGSARFSEKQRKLFFQHYFPWAIRAGMQSTDLMCVYYEQHFHEDLEDLRKKWGIVPSP 461
            H   LP NT G  Y S++     SPD R PVRF+D +ELAY+  R RE HDF+H + GLP  + GE A+KV+EF  M + M  L  +    R    QR+  +  Y+PWA R+G+ +  L+ VY+E+    D+ +LR+  GI   P
Sbjct:  156 HLRALPKNTLGHTYVSWLDREGVSPDTRVPVRFIDNEELAYIYQRYRECHDFYHAITGLPIIIEGEIAVKVLEFMNMGILMPGLGALLAPLRLKPSQRERLYSIYYPWAFRSGLNAKPLINVYWEKSLEMDVNELRRSLGIEQPP 300          
BLAST of EY692139 vs. ExPASy Swiss-Prot
Match: COQ4_ANOGA (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Anopheles gambiae GN=AGAP005199 PE=3 SV=4)

HSP 1 Score: 122.094 bits (305), Expect = 3.971e-27
Identity = 57/137 (41.61%), Postives = 82/137 (59.85%), Query Frame = 3
Query:   39 LPPNTFGAAYASFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFGLPTNLIGESALKVIEFQQMYLPMCFLSVIGGSARFSEKQRKLFFQHYFPWAIRAGMQSTDLMCVYYEQHFHEDLEDLRKKWGI 449
            +P +TFG  Y  FM   N +PD R  VRF+D   LAYV  R RE HD  H +  +PTN++GE  +K +E     LPMC+   + G+ R   KQR+ + + Y PWA+R G +   LM VY+E+ + +D+ +LRK+  I
Sbjct:  141 MPEHTFGYTYVKFMEDNNITPDSRMEVRFLDEPGLAYVMTRYRETHDMVHAILDMPTNMLGEVTVKWVEALNTGLPMCYGGAVFGAFRLRTKQRQNYLRKYLPWALRTGNRIKPLMGVYWEKRWEQDVTELRKELNI 277          
BLAST of EY692139 vs. ExPASy Swiss-Prot
Match: COQ4_DROGR (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Drosophila grimshawi GN=GH14907 PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 6.773e-27
Identity = 55/137 (40.15%), Postives = 83/137 (60.58%), Query Frame = 3
Query:   39 LPPNTFGAAYASFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFGLPTNLIGESALKVIEFQQMYLPMCFLSVIGGSARFSEKQRKLFFQHYFPWAIRAGMQSTDLMCVYYEQHFHEDLEDLRKKWGI 449
            +PP+TFGA YA F+   N +PD R  V F+D  +LAYV  R RE HD  H +  +PTN++ E  +K +E     LPMC+   + G+ R   KQR+ + + Y PWAI    Q   LM +Y+E+ + +++++LR + GI
Sbjct:  124 MPPDTFGATYAKFLKDNNVTPDTRMEVHFLDDPKLAYVMTRYRECHDLVHAVLNMPTNMLCEVTVKWVEALNTGLPMCYGGAVFGAVRLRPKQRREYLRRYLPWAIENSKQMKPLMPIYWERRWEQNVDELRNELGI 260          
The following BLAST results are available for this feature:
BLAST of EY692139 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
COQ4_DROPE7.236e-2942.34Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
COQ4_RAT1.612e-2842.55Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
COQ4_MOUSE6.126e-2842.55Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
COQ41_CULQU1.365e-2743.80Ubiquinone biosynthesis protein COQ4 homolog 1, mi... [more]
COQ4_PICGU1.782e-2741.13Ubiquinone biosynthesis protein COQ4, mitochondria... [more]
COQ4_DROVI1.782e-2741.01Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
COQ4_XENTR2.328e-2742.25Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
COQ4_CLAL43.040e-2741.38Ubiquinone biosynthesis protein COQ4, mitochondria... [more]
COQ4_ANOGA3.971e-2741.61Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
COQ4_DROGR6.773e-2740.15Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-097-C12-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692139 ID=EY692139; Name=EY692139; organism=Citrus sinensis; type=EST; length=853bp
CACGGGTTATATATGAAAAAGTAGGCCATGCGTGGGATCTACCACCAAAC
ACATTTGGTGCTGCCTATGCAAGTTTTATGGGATCCAGGAACTTCTCTCC
AGATGATCGCCCACCAGTGCGGTTCATGGACACAGATGAACTAGCATATG
TGGCCATGCGGGCTCGTGAGGTGCACGACTTCTGGCACACCCTTTTTGGT
CTTCCCACCAACTTGATTGGTGAGTCTGCTCTAAAAGTAATAGAGTTCCA
GCAAATGTACCTTCCAATGTGCTTCTTATCAGTTATAGGGGGCTCTGCCA
GATTTAGTGAGAAGCAAAGGAAACTGTTCTTCCAACACTACTTTCCATGG
GCCATCCGGGCTGGCATGCAGTCCACAGATCTCATGTGTGTGTATTACGA
GCAGCACTTTCACGAGGATTTGGAGGATCTTCGAAAGAAATGGGGAATAG
TCCCTTCTCCTGCTGCTCCTGTATGACCCTATTTAAAGTCAATGGATACC
CTGTGATGTCAGAGAATTTTTGTTGTCCGAACTGTTTTTGGTTGGTTGGG
AATACAGCTCAAACTACAGGAACAATTTGTAAAAAATCAAATGAGAAATA
ATACGCCCCCCAAAACAAATAAAAAAAGAAACAAAAGACAAAAGAAAAAA
AAAAAAAAGAGGGGGCGGGCCGCTCAAAAGGGAAACCAAACTAATGAAAG
TAGGGCGATGACAAAAACAAAACATAATCAAAGAATGCAAATTTAAAAAA
TCATTACAATGGGGAATGGATTTTATAAAATATGGAGGAGGGCGAAAAAA
CTGGAGCGTACCCGAAAACTAATATGAGCAATGAAGGACGCCAATCCTGA
TTA
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