EY692139

Overview
NameEY692139
Unique NameEY692139
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY692139_ssr538 microsatellite EY692139_ssr538:538..549. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig4377 contig Csv1_Contig4377:221..1072. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY692139 vs. ExPASy Swiss-Prot
Match: COQ4_AJEDR (Ubiquinone biosynthesis protein COQ4, mitochondrial OS=Ajellomyces dermatitidis (strain ER-3) GN=COQ4 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.277e-25
Identity = 57/137 (41.61%), Postives = 82/137 (59.85%), Query Frame = 3
Query:   39 LPPNTFGAAYASFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFGLPTNLIGESALKVIEFQQMYLPMCFLSVIGGSARFSEKQRKLFFQHYFPWAIRAGMQSTDLMCVYYEQHFHEDLEDLRKKWGI 449
            LPPNT G  Y  ++      PD R PV+++D +E AYV  R RE HDF+H + GLP  + GE ALK  EF    LPM  LS+     R    +R+ F++ + PWAIR+G+ S +++ VY+E+    D  +LR++ GI
Sbjct:  120 LPPNTVGRTYVGWLDREGVGPDTRAPVQYIDDEECAYVMQRYRECHDFYHAITGLPVVVEGEVALKTFEFANTLLPMTGLSMF-AVMRLKPAERERFWKLHLPWAIRSGLASKEVINVYWEEQLERDANELREELGI 255          
BLAST of EY692139 vs. ExPASy Swiss-Prot
Match: COQ4_NEOFI (Ubiquinone biosynthesis protein coq4, mitochondrial OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=coq4 PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.668e-25
Identity = 58/148 (39.19%), Postives = 88/148 (59.46%), Query Frame = 3
Query:   18 KVGHAWDLPPNTFGAAYASFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFGLPTNLIGESALKVIEFQQMYLPMCFLSVIGGSARFSEKQRKLFFQHYFPWAIRAGMQSTDLMCVYYEQHFHEDLEDLRKKWGIVPSP 461
            K+ +   LP N+ G  YA+++     SPD R  V+++D +E AY   R RE HDF+H + GLP  + GE ALK  EF    +PM  LS+     R    +R+ FF  + PWA+R+G+ S +L+ VY+E+   +D+++LRK+ GI   P
Sbjct:  115 KLPYLRTLPENSVGRTYATWLDREGVSPDTRDSVKYIDDEECAYAMQRYRECHDFYHAVTGLPIFVEGELALKAFEFLNTLIPMTGLSIF-AFVRLKPAERERFFSLHLPWAVRSGLASKELINVYWEEILEKDVDELRKELGIERPP 261          
BLAST of EY692139 vs. ExPASy Swiss-Prot
Match: COQ4_ASPOR (Ubiquinone biosynthesis protein coq4, mitochondrial OS=Aspergillus oryzae GN=coq4 PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.668e-25
Identity = 58/141 (41.13%), Postives = 87/141 (61.70%), Query Frame = 3
Query:   39 LPPNTFGAAYASFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFGLPTNLIGESALKVIEFQQMYLPMCFLSVIGGSARFSEKQRKLFFQHYFPWAIRAGMQSTDLMCVYYEQHFHEDLEDLRKKWGIVPSP 461
            LP N+ G  YA+++     SPD R  V+++D +E AYV  R RE HDF+H + GLPT + GE ALK  EF    +PM  LS+   + R    +R+ FF  + PWA+R+G+ S +L+ VY+E+   +D+++LR + GI   P
Sbjct:  122 LPENSVGRTYAAWLDREGVSPDTRDNVQYIDDEECAYVMQRYRECHDFYHAVTGLPTFVEGEIALKAFEFLNTLIPMTGLSMF-AAVRLKPAERERFFALWLPWAVRSGLASKELINVYWEKILEKDVDELRGELGIEKPP 261          
BLAST of EY692139 vs. ExPASy Swiss-Prot
Match: COQ4_ASPFN (Ubiquinone biosynthesis protein coq4, mitochondrial OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=coq4 PE=3 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.668e-25
Identity = 58/141 (41.13%), Postives = 87/141 (61.70%), Query Frame = 3
Query:   39 LPPNTFGAAYASFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFGLPTNLIGESALKVIEFQQMYLPMCFLSVIGGSARFSEKQRKLFFQHYFPWAIRAGMQSTDLMCVYYEQHFHEDLEDLRKKWGIVPSP 461
            LP N+ G  YA+++     SPD R  V+++D +E AYV  R RE HDF+H + GLPT + GE ALK  EF    +PM  LS+   + R    +R+ FF  + PWA+R+G+ S +L+ VY+E+   +D+++LR + GI   P
Sbjct:  122 LPENSVGRTYAAWLDREGVSPDTRDNVQYIDDEECAYVMQRYRECHDFYHAVTGLPTFVEGEIALKAFEFLNTLIPMTGLSMF-AAVRLKPAERERFFALWLPWAVRSGLASKELINVYWEKILEKDVDELRGELGIEKPP 261          
BLAST of EY692139 vs. ExPASy Swiss-Prot
Match: COQ4_PARBA (Ubiquinone biosynthesis protein COQ4, mitochondrial OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=COQ4 PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.179e-25
Identity = 56/141 (39.72%), Postives = 85/141 (60.28%), Query Frame = 3
Query:   39 LPPNTFGAAYASFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFGLPTNLIGESALKVIEFQQMYLPMCFLSVIGGSARFSEKQRKLFFQHYFPWAIRAGMQSTDLMCVYYEQHFHEDLEDLRKKWGIVPSP 461
            LPPN+ G  Y S++      PD R  VR++D +E AYV  R RE HDF+H + GLP  + GE +LK  EF    LPM  LS+     R   ++R+ +++ + PWA+R+G+ S +++ VY+E+    D+ +LR+K GI   P
Sbjct:  121 LPPNSVGRTYVSWLDREGVGPDTRETVRYIDDEECAYVMQRYRECHDFYHAVTGLPIVVEGEVSLKTFEFANTLLPMTGLSMF-AVMRLKPEERERYWKLHLPWAVRSGLASKEVINVYWEEELERDVNELREKLGIEKPP 260          
BLAST of EY692139 vs. ExPASy Swiss-Prot
Match: COQ4_DANRE (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Danio rerio GN=coq4 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.717e-25
Identity = 58/143 (40.56%), Postives = 82/143 (57.34%), Query Frame = 3
Query:   39 LPPNTFGAAYASFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFGLPTNLIGESALKVIEFQQMYLPMCFLSVIGGSARFSEKQRKLFFQHYFPWAIRAGMQSTDLMCVYYEQHFHEDLEDLRKKWGIVPSPAA 467
            LP  T G  Y  F+     +PD R  V+F+D +ELAYV  R REVHD  HTL G+PTN++GE A+K  E  Q  LPMC L    G  R S  + +L  Q    WA+R G ++  ++ +YYE+ + + L++LR +  I   P +
Sbjct:  117 LPDGTLGREYLRFLEENRVTPDTRAEVKFVDNEELAYVMQRYREVHDLLHTLLGMPTNMLGEVAVKWFEAAQTGLPMCILGAALGPLRLSVSRLQLLGQSLGLWALRNGGRARCVLSIYYERRWEQTLDELRHELNIEEPPVS 259          
BLAST of EY692139 vs. ExPASy Swiss-Prot
Match: COQ4_COCP7 (Ubiquinone biosynthesis protein COQ4, mitochondrial OS=Coccidioides posadasii (strain C735) GN=COQ4 PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.717e-25
Identity = 57/142 (40.14%), Postives = 86/142 (60.56%), Query Frame = 3
Query:   36 DLPPNTFGAAYASFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFGLPTNLIGESALKVIEFQQMYLPMCFLSVIGGSARFSEKQRKLFFQHYFPWAIRAGMQSTDLMCVYYEQHFHEDLEDLRKKWGIVPSP 461
            +LP NT G  YA+++     SPD R  V+++D +E AYV  R RE HDF+H + GLP  + GE ALK  EF    +PM  LSV   + R   ++++ F+  + PWAIR+G+ S +L+ VY+E+    D+ +LR++  I   P
Sbjct:  120 NLPKNTVGYTYATWLDREGVSPDTRSSVQYIDDEECAYVMQRYRECHDFYHAVTGLPIVVEGEIALKAFEFMNTLIPMTGLSVF-AAIRLKPEEKQRFWSIHLPWAIRSGLASKELINVYWEEQLERDVNELREELNIEKPP 260          
BLAST of EY692139 vs. ExPASy Swiss-Prot
Match: COQ4_COCIM (Ubiquinone biosynthesis protein COQ4, mitochondrial OS=Coccidioides immitis GN=COQ4 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.854e-25
Identity = 57/141 (40.43%), Postives = 85/141 (60.28%), Query Frame = 3
Query:   39 LPPNTFGAAYASFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFGLPTNLIGESALKVIEFQQMYLPMCFLSVIGGSARFSEKQRKLFFQHYFPWAIRAGMQSTDLMCVYYEQHFHEDLEDLRKKWGIVPSP 461
            LP NT G  YA+++     SPD R  V+++D +E AYV  R RE HDF+H + GLP  + GE ALK  EF    +PM  LSV   + R   ++++ F+  + PWAIR+G+ S +L+ VY+E+    D+ +LR++  I   P
Sbjct:  121 LPKNTVGYTYATWLDREGVSPDTRSSVQYIDDEECAYVMQRYRECHDFYHAVTGLPIVVEGEIALKAFEFMNTLIPMTGLSVF-AAIRLKPEEKQRFWSIHLPWAIRSGLASKELINVYWEEQLERDVNELREELNIEKPP 260          
BLAST of EY692139 vs. ExPASy Swiss-Prot
Match: COQ4_VANPO (Ubiquinone biosynthesis protein COQ4, mitochondrial OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=COQ4 PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.339e-25
Identity = 54/141 (38.30%), Postives = 83/141 (58.87%), Query Frame = 3
Query:   39 LPPNTFGAAYASFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFGLPTNLIGESALKVIEFQQMYLPMCFLSVIGGSARFSEKQRKLFFQHYFPWAIRAGMQSTDLMCVYYEQHFHEDLEDLRKKWGIVPSP 461
            +P NTFG  + S++     SPD R PV+++D  + A++  R R+ HDF+H+L  LP  + GE A+K +E   M +PM  L  +    R    QR+  ++ Y PWAIR G+    L+ VY+E+   +D+ +LRK+ GI P P
Sbjct:  175 MPKNTFGYTFYSWLKKEGVSPDTRAPVKYIDDPDHAFIFKRYRQCHDFYHSLNDLPIIIEGEIAVKALEAANMGIPMAALGTLLAPLRLKSAQRQRLYEIYLPWAIRTGLSCKPLINVYWEELLDKDVNELRKELGITPPP 315          
BLAST of EY692139 vs. ExPASy Swiss-Prot
Match: COQ4_XENLA (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Xenopus laevis GN=coq4 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.280e-25
Identity = 58/142 (40.85%), Postives = 82/142 (57.75%), Query Frame = 3
Query:   36 DLPPNTFGAAYASFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFGLPTNLIGESALKVIEFQQMYLPMCFLSVIGGSARFSEKQRKLFFQHYFPWAIRAGMQSTDLMCVYYEQHFHEDLEDLRKKWGIVPSP 461
            ++   T G  YA F+     +PD R PV+F+D +ELAYVA R REVHD  HTL G+PTN++GE  +K  E  Q  LPMC L    G  R + K R        PWA+++G  +  ++  +YE  + + +  LRK+ GI+P P
Sbjct:  139 EMQDGTLGREYARFLDVNRVTPDTRMPVKFVDDEELAYVAQRYREVHDLMHTLLGMPTNMLGEVVVKWFEAVQTGLPMCILGAAFGPLRLNNK-RMQKLGVLVPWAVQSGRNARCVLNFHYENRWEQSVLSLRKEIGILPLP 279          
The following BLAST results are available for this feature:
BLAST of EY692139 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
COQ4_AJEDR1.277e-2541.61Ubiquinone biosynthesis protein COQ4, mitochondria... [more]
COQ4_NEOFI1.668e-2539.19Ubiquinone biosynthesis protein coq4, mitochondria... [more]
COQ4_ASPOR1.668e-2541.13Ubiquinone biosynthesis protein coq4, mitochondria... [more]
COQ4_ASPFN1.668e-2541.13Ubiquinone biosynthesis protein coq4, mitochondria... [more]
COQ4_PARBA2.179e-2539.72Ubiquinone biosynthesis protein COQ4, mitochondria... [more]
COQ4_DANRE3.717e-2540.56Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
COQ4_COCP73.717e-2540.14Ubiquinone biosynthesis protein COQ4, mitochondria... [more]
COQ4_COCIM4.854e-2540.43Ubiquinone biosynthesis protein COQ4, mitochondria... [more]
COQ4_VANPO6.339e-2538.30Ubiquinone biosynthesis protein COQ4, mitochondria... [more]
COQ4_XENLA8.280e-2540.85Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-097-C12-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692139 ID=EY692139; Name=EY692139; organism=Citrus sinensis; type=EST; length=853bp
CACGGGTTATATATGAAAAAGTAGGCCATGCGTGGGATCTACCACCAAAC
ACATTTGGTGCTGCCTATGCAAGTTTTATGGGATCCAGGAACTTCTCTCC
AGATGATCGCCCACCAGTGCGGTTCATGGACACAGATGAACTAGCATATG
TGGCCATGCGGGCTCGTGAGGTGCACGACTTCTGGCACACCCTTTTTGGT
CTTCCCACCAACTTGATTGGTGAGTCTGCTCTAAAAGTAATAGAGTTCCA
GCAAATGTACCTTCCAATGTGCTTCTTATCAGTTATAGGGGGCTCTGCCA
GATTTAGTGAGAAGCAAAGGAAACTGTTCTTCCAACACTACTTTCCATGG
GCCATCCGGGCTGGCATGCAGTCCACAGATCTCATGTGTGTGTATTACGA
GCAGCACTTTCACGAGGATTTGGAGGATCTTCGAAAGAAATGGGGAATAG
TCCCTTCTCCTGCTGCTCCTGTATGACCCTATTTAAAGTCAATGGATACC
CTGTGATGTCAGAGAATTTTTGTTGTCCGAACTGTTTTTGGTTGGTTGGG
AATACAGCTCAAACTACAGGAACAATTTGTAAAAAATCAAATGAGAAATA
ATACGCCCCCCAAAACAAATAAAAAAAGAAACAAAAGACAAAAGAAAAAA
AAAAAAAAGAGGGGGCGGGCCGCTCAAAAGGGAAACCAAACTAATGAAAG
TAGGGCGATGACAAAAACAAAACATAATCAAAGAATGCAAATTTAAAAAA
TCATTACAATGGGGAATGGATTTTATAAAATATGGAGGAGGGCGAAAAAA
CTGGAGCGTACCCGAAAACTAATATGAGCAATGAAGGACGCCAATCCTGA
TTA
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