EY692139

Overview
NameEY692139
Unique NameEY692139
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY692139_ssr538 microsatellite EY692139_ssr538:538..549. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig4377 contig Csv1_Contig4377:221..1072. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY692139 vs. ExPASy Swiss-Prot
Match: COQ4_PHANO (Ubiquinone biosynthesis protein COQ4, mitochondrial OS=Phaeosphaeria nodorum GN=COQ4 PE=3 SV=3)

HSP 1 Score: 113.62 bits (283), Expect = 1.412e-24
Identity = 60/141 (42.55%), Postives = 79/141 (56.03%), Query Frame = 3
Query:   39 LPPNTFGAAYASFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFGLPTNLIGESALKVIEFQQMYLPMCFLSVIGGSARFSEKQRKLFFQHYFPWAIRAGMQSTDLMCVYYEQHFHEDLEDLRKKWGIVPSP 461
            LPPNT G  YA ++     SPD R  V+++D +E AYV  R RE HDF+H L GLP    GE ALK  EF    LPM  L+V         + R+ F+  Y PWA R G QS D++ +Y+E+    D++ LR + GI   P
Sbjct:  123 LPPNTLGYVYALWLDREGVSPDTRATVQYIDDEECAYVMQRYRECHDFYHALVGLPVFREGEVALKAFEFANTGLPMTGLAVFSAFTLKKAEWRR-FWDIYGPWATRNGAQSDDVINIYWEEELETDIDQLRTRLGIEKPP 262          
BLAST of EY692139 vs. ExPASy Swiss-Prot
Match: COQ4_DICDI (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Dictyostelium discoideum GN=coq4 PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.845e-24
Identity = 58/139 (41.73%), Postives = 75/139 (53.96%), Query Frame = 3
Query:   39 LPPNTFGAAYASFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFGLPTNLIGESALKVIEFQQMYLPMCFLSVIGGSARFSEKQRKLFFQHYFPWAIRAGMQSTDLMCVYYEQHFHEDLEDLRKKWGIVP 455
            LP  TFG AY  +M    +SPD+R  V  +  ++ AYV  R REVHDFWH L G+  +  GE A+K  EF Q  LPM  +  I G  R S  +R     H  PWAI++      LM V YE H+ +DL + R K   +P
Sbjct:  131 LPSTTFGGAYYRWMKEHGYSPDERTEVTLIQDEDDAYVMQRYREVHDFWHVLAGVRPDFQGEVAIKWFEFLQTGLPMNAIGSIIGPLRCSWNERNELINHMIPWAIKSSKSCVYLMNVKYEDHWEDDLNEFRAKLNFIP 269          
BLAST of EY692139 vs. ExPASy Swiss-Prot
Match: COQ4_ASPCL (Ubiquinone biosynthesis protein coq4, mitochondrial OS=Aspergillus clavatus GN=coq4 PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.845e-24
Identity = 56/141 (39.72%), Postives = 85/141 (60.28%), Query Frame = 3
Query:   39 LPPNTFGAAYASFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFGLPTNLIGESALKVIEFQQMYLPMCFLSVIGGSARFSEKQRKLFFQHYFPWAIRAGMQSTDLMCVYYEQHFHEDLEDLRKKWGIVPSP 461
            LP N+ G  YA+++     SPD R  V+++D +E AYV  R RE HDF+H + GLP  + GE ALK  EF    +PM  LS+     R    +R+ FF  + PWA+R+G+ S +L+ VY+E+   +D+++LR++  I   P
Sbjct:  121 LPENSVGRTYATWLDREGVSPDTRNSVKYIDDEECAYVMQRYRECHDFYHAVTGLPIFVEGELALKAFEFLNTLIPMTGLSIF-AFVRLKPAERERFFSLHLPWAVRSGLASKELINVYWEEILEKDVDELRRELHIERPP 260          
BLAST of EY692139 vs. ExPASy Swiss-Prot
Match: COQ4_MAGGR (Ubiquinone biosynthesis protein COQ4, mitochondrial OS=Magnaporthe grisea GN=COQ4 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.409e-24
Identity = 57/141 (40.43%), Postives = 80/141 (56.74%), Query Frame = 3
Query:   39 LPPNTFGAAYASFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFGLPTNLIGESALKVIEFQQMYLPMCFLSVIGGSARFSEKQRKLFFQHYFPWAIRAGMQSTDLMCVYYEQHFHEDLEDLRKKWGIVPSP 461
            LP  T GA Y +++     +PD R  VR++D +E AYV  R RE HDF+H L  LP    GE ALK  EF    LPM  L+    +    E +R+ F   Y PWA++ G+++ +++ VY+E+    D+ DLRK  GI P P
Sbjct:  131 LPQGTVGATYVAWLDREGVTPDTRAHVRYVDDEECAYVLQRYRESHDFYHALTALPVVREGEVALKAFEFANTLLPMTGLATF-AAFTLREGERRRFVDTYLPWAVKNGLRAKEIINVYWEEEMETDVVDLRKALGIEPPP 270          
BLAST of EY692139 vs. ExPASy Swiss-Prot
Match: COQ4_BOTFB (Ubiquinone biosynthesis protein coq4, mitochondrial OS=Botryotinia fuckeliana (strain B05.10) GN=coq4 PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.367e-24
Identity = 56/137 (40.88%), Postives = 80/137 (58.39%), Query Frame = 3
Query:   39 LPPNTFGAAYASFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFGLPTNLIGESALKVIEFQQMYLPMCFLSVIGGSARFSEKQRKLFFQHYFPWAIRAGMQSTDLMCVYYEQHFHEDLEDLRKKWGI 449
            LPPNT G  YA ++     SPD R  V+++D +E AYV  R RE HDF+H + GLP    GE ALK  EF    LPM  LS+    +     +R+ FF  Y PWA   G+++ +++ VY+E+     +E+LR++ GI
Sbjct:  122 LPPNTVGRCYAEWLDREGVSPDTRDSVKYIDDEECAYVMQRYRECHDFYHAITGLPIVREGEVALKAFEFANTLLPMTGLSMFAVMS-LKPAERRRFFTIYAPWAFANGLKAEEVINVYWEEQLERSVEELREELGI 257          
BLAST of EY692139 vs. ExPASy Swiss-Prot
Match: COQ4_YARLI (Ubiquinone biosynthesis protein COQ4, mitochondrial OS=Yarrowia lipolytica GN=COQ4 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.196e-23
Identity = 56/137 (40.88%), Postives = 77/137 (56.20%), Query Frame = 3
Query:   51 TFGAAYASFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFGLPTNLIGESALKVIEFQQMYLPMCFLSVIGGSARFSEKQRKLFFQHYFPWAIRAGMQSTDLMCVYYEQHFHEDLEDLRKKWGIVPSP 461
            + G  Y  ++     SPD R  VR++D  E AYV  R RE HDF+H L GLP  + GE ALK  E+    LPM  L ++    +F  KQRK +F  Y PWA+  G +S  ++ VY+E+   +D E+LR+  GI   P
Sbjct:  113 SIGRTYVEWLDKEGVSPDTRAQVRYIDDPECAYVMQRYRESHDFYHALTGLPIIMEGELALKAFEWANTGLPMSGLGMVLTPLKFKPKQRKRYFDVYLPWALYNGFRSKPVINVYWEEVLEKDAEELRRDLGIEQPP 249          
BLAST of EY692139 vs. ExPASy Swiss-Prot
Match: COQ4_PENCW (Ubiquinone biosynthesis protein coq4, mitochondrial OS=Penicillium chrysogenum (strain ATCC 28089 / DSM 1075 / Wisconsin 54-1255) GN=coq4 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.196e-23
Identity = 57/145 (39.31%), Postives = 84/145 (57.93%), Query Frame = 3
Query:   27 HAWDLPPNTFGAAYASFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFGLPTNLIGESALKVIEFQQMYLPMCFLSVIGGSARFSEKQRKLFFQHYFPWAIRAGMQSTDLMCVYYEQHFHEDLEDLRKKWGIVPSP 461
            H   LP N+ G  YA ++     SPD R  V+++D +E AYV  R RE HDF+H + GLP  + GE ALK +EF    LPM  LS+     R    +++ F   + PWAIR+G+ S +L+ VY+E+   +D+++LR +  I   P
Sbjct:  116 HLRTLPENSVGRTYAKWLDREGVSPDTRDNVQYIDNEECAYVMQRYRECHDFYHAVTGLPIFVEGELALKALEFLNTLLPMTGLSLF-AFVRMKPAEKERFLTLHLPWAIRSGLGSKELINVYWEEVLEKDVDELRAELNIERPP 259          
BLAST of EY692139 vs. ExPASy Swiss-Prot
Match: COQ4_SCLS1 (Ubiquinone biosynthesis protein coq4, mitochondrial OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=coq4 PE=3 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 2.039e-23
Identity = 56/141 (39.72%), Postives = 80/141 (56.74%), Query Frame = 3
Query:   27 HAWDLPPNTFGAAYASFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFGLPTNLIGESALKVIEFQQMYLPMCFLSVIGGSARFSEKQRKLFFQHYFPWAIRAGMQSTDLMCVYYEQHFHEDLEDLRKKWGI 449
            H   LP N  G  YA ++     SPD R  V+++D +E AYV  R RE HDF+H + GLP    GE ALK  EF    LPM  LS+    +     +R+ FF  Y PWA+  G+++ +L+ VY+E+     +E+LR++ GI
Sbjct:  120 HLRTLPTNAVGRCYADWLDREGVSPDTRDSVKYIDDEECAYVMQRYRECHDFYHAITGLPIVREGEVALKAFEFANTLLPMTGLSMFAVMS-LKPAERRRFFTIYAPWALTNGLKADELINVYWEEQLERSVEELREELGI 259          
BLAST of EY692139 vs. ExPASy Swiss-Prot
Match: COQ4_AJECG (Ubiquinone biosynthesis protein COQ4, mitochondrial OS=Ajellomyces capsulata (strain ATCC 26029 / G186AR / H82 / RMSCC 2432) GN=COQ4 PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.663e-23
Identity = 54/137 (39.42%), Postives = 80/137 (58.39%), Query Frame = 3
Query:   39 LPPNTFGAAYASFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFGLPTNLIGESALKVIEFQQMYLPMCFLSVIGGSARFSEKQRKLFFQHYFPWAIRAGMQSTDLMCVYYEQHFHEDLEDLRKKWGI 449
            L PNT G  Y  ++      PD R  V+++D  E AYV  R RE HDF+H + GLP  + GE ALK  EF    LPM  LS+     R   ++++ F++ + PWA+R G+ S  ++ VY+E+    D+++LRK+ GI
Sbjct:  112 LSPNTVGRTYVDWLDREGVGPDTRAKVQYIDDKECAYVMQRYRECHDFYHAITGLPVVVEGEIALKTFEFANTLLPMTGLSMF-AVMRLKPEEKERFWKLHLPWAVRNGLASKAVINVYWEEQLERDVDELRKELGI 247          
BLAST of EY692139 vs. ExPASy Swiss-Prot
Match: COQ4_AJECN (Ubiquinone biosynthesis protein COQ4, mitochondrial OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=COQ4 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.543e-23
Identity = 54/137 (39.42%), Postives = 79/137 (57.66%), Query Frame = 3
Query:   39 LPPNTFGAAYASFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFGLPTNLIGESALKVIEFQQMYLPMCFLSVIGGSARFSEKQRKLFFQHYFPWAIRAGMQSTDLMCVYYEQHFHEDLEDLRKKWGI 449
            L PNT G  Y  ++      PD R  V+++D  E AYV  R RE HDF+H + GLP    GE ALK  EF    LPM  LS+     R   ++++ F++ + PWA+R G+ S  ++ VY+E+    D+++LRK+ GI
Sbjct:  112 LSPNTVGRTYVDWLDREGVGPDTRAKVQYIDDKECAYVMQRYRECHDFYHAITGLPVVAEGEIALKTFEFANTLLPMTGLSMF-AVMRLKPEEKERFWKLHLPWAVRNGLASKAVINVYWEEQLERDVDELRKELGI 247          
The following BLAST results are available for this feature:
BLAST of EY692139 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
COQ4_PHANO1.412e-2442.55Ubiquinone biosynthesis protein COQ4, mitochondria... [more]
COQ4_DICDI1.845e-2441.73Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
COQ4_ASPCL1.845e-2439.72Ubiquinone biosynthesis protein coq4, mitochondria... [more]
COQ4_MAGGR2.409e-2440.43Ubiquinone biosynthesis protein COQ4, mitochondria... [more]
COQ4_BOTFB5.367e-2440.88Ubiquinone biosynthesis protein coq4, mitochondria... [more]
COQ4_YARLI1.196e-2340.88Ubiquinone biosynthesis protein COQ4, mitochondria... [more]
COQ4_PENCW1.196e-2339.31Ubiquinone biosynthesis protein coq4, mitochondria... [more]
COQ4_SCLS12.039e-2339.72Ubiquinone biosynthesis protein coq4, mitochondria... [more]
COQ4_AJECG2.663e-2339.42Ubiquinone biosynthesis protein COQ4, mitochondria... [more]
COQ4_AJECN4.543e-2339.42Ubiquinone biosynthesis protein COQ4, mitochondria... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-097-C12-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692139 ID=EY692139; Name=EY692139; organism=Citrus sinensis; type=EST; length=853bp
CACGGGTTATATATGAAAAAGTAGGCCATGCGTGGGATCTACCACCAAAC
ACATTTGGTGCTGCCTATGCAAGTTTTATGGGATCCAGGAACTTCTCTCC
AGATGATCGCCCACCAGTGCGGTTCATGGACACAGATGAACTAGCATATG
TGGCCATGCGGGCTCGTGAGGTGCACGACTTCTGGCACACCCTTTTTGGT
CTTCCCACCAACTTGATTGGTGAGTCTGCTCTAAAAGTAATAGAGTTCCA
GCAAATGTACCTTCCAATGTGCTTCTTATCAGTTATAGGGGGCTCTGCCA
GATTTAGTGAGAAGCAAAGGAAACTGTTCTTCCAACACTACTTTCCATGG
GCCATCCGGGCTGGCATGCAGTCCACAGATCTCATGTGTGTGTATTACGA
GCAGCACTTTCACGAGGATTTGGAGGATCTTCGAAAGAAATGGGGAATAG
TCCCTTCTCCTGCTGCTCCTGTATGACCCTATTTAAAGTCAATGGATACC
CTGTGATGTCAGAGAATTTTTGTTGTCCGAACTGTTTTTGGTTGGTTGGG
AATACAGCTCAAACTACAGGAACAATTTGTAAAAAATCAAATGAGAAATA
ATACGCCCCCCAAAACAAATAAAAAAAGAAACAAAAGACAAAAGAAAAAA
AAAAAAAAGAGGGGGCGGGCCGCTCAAAAGGGAAACCAAACTAATGAAAG
TAGGGCGATGACAAAAACAAAACATAATCAAAGAATGCAAATTTAAAAAA
TCATTACAATGGGGAATGGATTTTATAAAATATGGAGGAGGGCGAAAAAA
CTGGAGCGTACCCGAAAACTAATATGAGCAATGAAGGACGCCAATCCTGA
TTA
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