EY692130

Overview
NameEY692130
Unique NameEY692130
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692130 vs. ExPASy Swiss-Prot
Match: RL3_BOVIN (60S ribosomal protein L3 OS=Bos taurus GN=RPL3 PE=2 SV=2)

HSP 1 Score: 224.557 bits (571), Expect = 5.987e-58
Identity = 112/207 (54.11%), Postives = 147/207 (71.01%), Query Frame = 1
Query:    1 EVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTENEQEGLQAWQGW---DGSL--TLA*LNLTGTEKGLTPMG 606
            E +RRFYKNW             +++  +GKK ++     +KKY  V+RV+AHTQ+R +  L+QKKAHLME+QVNGGT+AEK+D+A    E+Q+PV  VF +DEMID+IGVTKGKGY+GV +RW   +LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE  ++  +  QG+   DG L    A  +   ++K + P+G
Sbjct:  113 ECKRRFYKNWHKSKKKAFTKYCKKWQDADGKKQLERDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAHLMEVQVNGGTVAEKLDWARERLEQQVPVSQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLG 318          
BLAST of EY692130 vs. ExPASy Swiss-Prot
Match: RL3_DICDI (60S ribosomal protein L3 OS=Dictyostelium discoideum GN=rpl3 PE=1 SV=2)

HSP 1 Score: 222.631 bits (566), Expect = 2.275e-57
Identity = 117/204 (57.35%), Postives = 144/204 (70.59%), Query Frame = 1
Query:    7 RRRFYKNWCXXXXXXXXXXXX-QYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTENEQEGLQAWQGW--DG-SLTLA*LNLTGTEKGLTPMG 606
            RRR YKNW              QYET+EGKKSI+A L+ IKK  SVVRV+AHTQ+ K+K L QKKAH++EIQVNGG+I EKV++A   FEK + V  VF ++E+ID+IGVTKGKG+ GV+ RWGV +LPRKTH+GLRKVACIGAWHP+RVS TV RAGQ GYHHR E  ++  +  Q    DG  ++        TEK + PMG
Sbjct:  115 RRRLYKNWYKSKSKKAFTKYVKQYETEEGKKSIEASLQAIKKRCSVVRVIAHTQVHKLK-LTQKKAHVLEIQVNGGSIVEKVNFAVANFEKTVNVTGVFAENELIDVIGVTKGKGFNGVIKRWGVRKLPRKTHKGLRKVACIGAWHPSRVSTTVPRAGQLGYHHRVERNKKIYRIGQAQPEDGKQISTGKTEFDLTEKTINPMG 317          
BLAST of EY692130 vs. ExPASy Swiss-Prot
Match: RL3_MACFA (60S ribosomal protein L3 OS=Macaca fascicularis GN=RPL3 PE=2 SV=3)

HSP 1 Score: 221.476 bits (563), Expect = 5.068e-57
Identity = 112/207 (54.11%), Postives = 148/207 (71.50%), Query Frame = 1
Query:    1 EVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTENEQEGLQAWQGW---DGSL--TLA*LNLTGTEKGLTPMG 606
            E +RRFYKNW             +++ ++GKK ++     +KKY  V+RV+AHTQ+R +  L+QKKAHLMEIQVNGGT+AEK+D+A    E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW   +LPRKTHRGLRKVACIGA HPARV+F+VARAGQ GYHHRTE  ++  +  QG+   DG L    A  +   ++K + P+G
Sbjct:  113 ECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGARHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLG 318          
BLAST of EY692130 vs. ExPASy Swiss-Prot
Match: RL3_NEUCR (60S ribosomal protein L3 OS=Neurospora crassa GN=rpl-3 PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 6.619e-57
Identity = 111/202 (54.95%), Postives = 145/202 (71.78%), Query Frame = 1
Query:    1 EVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTENEQEGLQAWQGWDGSLTLA*LNLTGTEKGLTPMG 606
            EV+RRFYKNW             ++  + G  +I  +LE+IKKY +VVRVLAHTQIRK   LKQKKAHLMEIQ+NGG++A+KV++ +G FEK + +D++F+KDE+ID+I VTKG G+ GV  RWG  +LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT    +  +  +G D   + A   +  T+K +TPMG
Sbjct:  113 EVKRRFYKNWYKSKKKAFTKYVKKHSDNNGA-AITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAHLMEIQINGGSVADKVEFGHGLFEKPVSIDSIFEKDEVIDVIAVTKGHGFTGVTARWGTKKLPRKTHKGLRKVACIGAWHPSHVQWTVARAGQAGYHHRTSVNHKIYRIGKG-DAEDSAA-TEVDVTKKKITPMG 310          
BLAST of EY692130 vs. ExPASy Swiss-Prot
Match: RL3_DEBHA (60S ribosomal protein L3 OS=Debaryomyces hansenii GN=RPL3 PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.515e-56
Identity = 113/202 (55.94%), Postives = 138/202 (68.32%), Query Frame = 1
Query:    1 EVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTENEQEGLQAWQGWDGSLTLA*LNLTGTEKGLTPMG 606
            EVRRRFYKNW             +Y  D  +  ++ +L +IKKYASVVRVLAHTQI+K   L QKKAHL EIQVNGG++++KVD+A   FEK + VD+VF+KDEM+D+  VTKG G+EGV  RWG  +LPRKTHRGLRKVACIGAWHPA V +TVARAGQNG+HHRT    +  +     D S          T+K + PMG
Sbjct:  113 EVRRRFYKNWYKSKKKAFTKYSAKYAQDGAQ--VERELARIKKYASVVRVLAHTQIKKTP-LAQKKAHLAEIQVNGGSVSDKVDWAKEHFEKTVSVDSVFEKDEMVDVAAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPANVQWTVARAGQNGFHHRTSINHKVYRVGSAGDESSGAT--EFDRTKKTINPMG 309          
BLAST of EY692130 vs. ExPASy Swiss-Prot
Match: RL3_ASHGO (60S ribosomal protein L3 OS=Ashbya gossypii GN=RPL3 PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.515e-56
Identity = 114/202 (56.44%), Postives = 141/202 (69.80%), Query Frame = 1
Query:    1 EVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTENEQEGLQAWQGWDGSLTLA*LNLTGTEKGLTPMG 606
            E++RRFYKNW                  +G  +I+ +L +IKKYASVVRVLAHTQ+RK   L QKKAHL EIQ+NGG+++EKVD+A   FEK + VD+VF+++EMID+I VTKG G+EGV  RWG  +LPRKTHRGLRKVACIGAWHPA V +TVARAGQNGYHHRT    +  +  +G D     A      T+K +TPMG
Sbjct:  113 EIKRRFYKNWYKSKKKAFTQVPPPSTAQDGA-AIERELARIKKYASVVRVLAHTQVRKTP-LVQKKAHLAEIQLNGGSVSEKVDWAREHFEKTVSVDSVFEQNEMIDVIAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPAHVMWTVARAGQNGYHHRTSINHKVYRIGKGGDEG--NAATEFDRTKKTITPMG 310          
BLAST of EY692130 vs. ExPASy Swiss-Prot
Match: RL3B_SCHPO (60S ribosomal protein L3-B OS=Schizosaccharomyces pombe GN=rpl3b PE=2 SV=2)

HSP 1 Score: 217.624 bits (553), Expect = 7.319e-56
Identity = 115/202 (56.93%), Postives = 139/202 (68.81%), Query Frame = 1
Query:    1 EVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTENEQEGLQAWQGWDGSLTLA*LNLTGTEKGLTPMG 606
            EV+RRFYKNW             +Y   E  +SI  +LE+IKKY SVVRVLAHTQIRK   L QKKAHLMEIQVNGG++A+KV++A   FEK + + + F+++EMID+IGVT+GKG EG   RWG  RLPRKTHRGLRKVACIGAWHPA V +TVARAG  GY HRT+   +  +   G D     A  +   TEK +TPMG
Sbjct:  113 EVKRRFYKNWFKSKKKAFTKYAKKYA--ESTQSINRELERIKKYCSVVRVLAHTQIRKTP-LAQKKAHLMEIQVNGGSVADKVEWAREHFEKTVDIKSTFEQNEMIDVIGVTRGKGNEGTTARWGTKRLPRKTHRGLRKVACIGAWHPANVQWTVARAGNAGYMHRTQLNSKIYRIGAGDDAK--NASTDFDATEKRITPMG 309          
BLAST of EY692130 vs. ExPASy Swiss-Prot
Match: RL3A_SCHPO (60S ribosomal protein L3-A OS=Schizosaccharomyces pombe GN=rpl3a PE=1 SV=2)

HSP 1 Score: 217.624 bits (553), Expect = 7.319e-56
Identity = 115/202 (56.93%), Postives = 139/202 (68.81%), Query Frame = 1
Query:    1 EVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTENEQEGLQAWQGWDGSLTLA*LNLTGTEKGLTPMG 606
            EV+RRFYKNW             +Y   E  +SI  +LE+IKKY SVVRVLAHTQIRK   L QKKAHLMEIQVNGG++A+KV++A   FEK + + + F+++EMID+IGVT+GKG EG   RWG  RLPRKTHRGLRKVACIGAWHPA V +TVARAG  GY HRT+   +  +   G D     A  +   TEK +TPMG
Sbjct:  113 EVKRRFYKNWFKSKKKAFTKYAKKYA--ESTQSINRELERIKKYCSVVRVLAHTQIRKTP-LAQKKAHLMEIQVNGGSVADKVEWAREHFEKTVDIKSTFEQNEMIDVIGVTRGKGNEGTTARWGTKRLPRKTHRGLRKVACIGAWHPANVQWTVARAGNAGYMHRTQLNSKIYRIGAGDDAK--NASTDFDATEKRITPMG 309          
BLAST of EY692130 vs. ExPASy Swiss-Prot
Match: RL3_KLULA (60S ribosomal protein L3 OS=Kluyveromyces lactis GN=RPL3 PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.057e-54
Identity = 110/202 (54.46%), Postives = 139/202 (68.81%), Query Frame = 1
Query:    1 EVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTENEQEGLQAWQGWDGSLTLA*LNLTGTEKGLTPMG 606
            EV+RRFYKNW             +Y   E    +  +L +IKKYASVVRVL HTQ+RK   L QKKAHL EIQ+NGG++++KVD+A   FEK + VD+VF+++EMID++ VTKG G+EGV  RWG  +LPRKTHRGLRKVACIGAWHPA V ++VARAGQ GYHHRT    +  +  +G D +   A      T+K +TPMG
Sbjct:  113 EVKRRFYKNWYKSKKKAFTKYSAKYA--ENGAQVDRELARIKKYASVVRVLVHTQVRKTP-LSQKKAHLAEIQLNGGSVSDKVDWAKEHFEKTVAVDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHHRTSINHKVYRVGKGDDEA--NAATEFDRTKKTITPMG 309          
BLAST of EY692130 vs. ExPASy Swiss-Prot
Match: RL3_YEAST (60S ribosomal protein L3 OS=Saccharomyces cerevisiae GN=RPL3 PE=1 SV=4)

HSP 1 Score: 211.46 bits (537), Expect = 5.245e-54
Identity = 113/202 (55.94%), Postives = 138/202 (68.32%), Query Frame = 1
Query:    1 EVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTENEQEGLQAWQGWDGSLTLA*LNLTGTEKGLTPMG 606
            EV+RRFYKNW             +Y  D     I+ +L +IKKYASVVRVL HTQIRK   L QKKAHL EIQ+NGG+I+EKVD+A   FEK + VD+VF+++EMID I VTKG G+EGV  RWG  +LPRKTHRGLRKVACIGAWHPA V ++VARAGQ GYH RT    +  +  +G D +      +   T+K +TPMG
Sbjct:  113 EVKRRFYKNWYKSKKKAFTKYSAKYAQDGA--GIERELARIKKYASVVRVLVHTQIRKTP-LAQKKAHLAEIQLNGGSISEKVDWAREHFEKTVAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHSRTSINHKIYRVGKGDDEANGAT--SFDRTKKTITPMG 309          
The following BLAST results are available for this feature:
BLAST of EY692130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
RL3_BOVIN5.987e-5854.1160S ribosomal protein L3 OS=Bos taurus GN=RPL3 PE=... [more]
RL3_DICDI2.275e-5757.3560S ribosomal protein L3 OS=Dictyostelium discoide... [more]
RL3_MACFA5.068e-5754.1160S ribosomal protein L3 OS=Macaca fascicularis GN... [more]
RL3_NEUCR6.619e-5754.9560S ribosomal protein L3 OS=Neurospora crassa GN=r... [more]
RL3_DEBHA2.515e-5655.9460S ribosomal protein L3 OS=Debaryomyces hansenii ... [more]
RL3_ASHGO2.515e-5656.4460S ribosomal protein L3 OS=Ashbya gossypii GN=RPL... [more]
RL3B_SCHPO7.319e-5656.9360S ribosomal protein L3-B OS=Schizosaccharomyces ... [more]
RL3A_SCHPO7.319e-5656.9360S ribosomal protein L3-A OS=Schizosaccharomyces ... [more]
RL3_KLULA1.057e-5454.4660S ribosomal protein L3 OS=Kluyveromyces lactis G... [more]
RL3_YEAST5.245e-5455.9460S ribosomal protein L3 OS=Saccharomyces cerevisi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-097-B10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692130 ID=EY692130; Name=EY692130; organism=Citrus sinensis; type=EST; length=877bp
GAGGTGAGAAGAAGGTTCTACAAGAACTGGTGCAAATCCAAGAAGAAGGC
TTTCACAAAATACTCAAAGCAGTATGAAACAGATGAAGGGAAGAAAAGTA
TCCAAGCTCAGCTGGAGAAGATCAAGAAGTATGCATCTGTTGTTCGTGTT
CTTGCTCACACTCAGATTAGGAAAATGAAGGGTTTGAAGCAGAAGAAGGC
ACACCTGATGGAAATCCAGGTCAATGGTGGCACCATTGCTGAAAAAGTTG
ACTATGCATATGGCTTCTTTGAAAAGCAAATTCCTGTTGATGCTGTTTTC
CAGAAGGATGAGATGATTGACATCATCGGTGTCACGAAAGGTAAAGGTTA
TGAAGGTGTTGTCACCCGTTGGGGTGTTACCCGCCTTCCTCGCAAGACTC
ACAGAGGTCTGCGTAAGGTGGCTTGTATTGGTGCCTGGCATCCTGCTAGG
GTTTCCTTCACAGTTGCCAGAGCTGGTCAGAATGGATACCATCATCGTAC
TGAAAATGAACAAGAAGGTTTACAAGCTTGGCAAGGGTGGGACGGGAGTC
TCACACTGGCTTAACTGAATTTGACAGGGACTGAGAAAGGACTTACCCCC
ATGGGGTGGCTTTCCTCACTATGGGATTGTGAAAAAAGATTATTTGAATG
TTAAGGGATGCTTGGTTGGGACCATAAAAAAGGGGGGTCTACGTTTCTTC
AGGTCGTTTCTCCAAACAAAAAATTTTCGTTTAAGTCTTTTGGAGGAATC
AAACATTTACGTTTACTTTGATTACCTCTTTCCAAGGTTTGGGGGAATGG
GCGCCTTTTTCAACATTACCATGGTAAGAAACAAAAAATTATATAGTGGA
CCGCATGGGAGAACCTAAAATTTGGGT
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