EY692113

Overview
NameEY692113
Unique NameEY692113
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length767
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692113 vs. ExPASy Swiss-Prot
Match: ATC1_DICDI (Calcium-transporting ATPase PAT1 OS=Dictyostelium discoideum GN=patA PE=2 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 9.207e-25
Identity = 64/161 (39.75%), Postives = 92/161 (57.14%), Query Frame = 3
Query:    3 EPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNAHSNKVKN-----TLIFNSFVLCQIFNEFNARKPDEK-NIFKGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVIGFISWPLAILGKLIPV 467
            EPPT  L++R P G+  PLIT  MW+N++ QA+ Q+++L  + +QG  I        AH   +KN     TL+FN FV  Q+FNE NAR    + N FK    N +F+ ++  TL +QI+ + F G   ST  L    WI  VV+G IS P+ +L + IP+
Sbjct:  810 EPPTPELLERPPNGKNAPLITRSMWKNIIGQAALQLAILFTILYQGHNIFQ-HFVPQAHGPIIKNGLHHYTLVFNCFVFLQLFNEINARVLGSRTNPFKNFFNNPIFIAVMIFTLGVQIIFVTFGGSATSTDSLYIVEWICCVVVGAISLPVGLLLRKIPI 969          
BLAST of EY692113 vs. ExPASy Swiss-Prot
Match: AT2B4_RAT (Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus GN=Atp2b4 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.571e-24
Identity = 59/144 (40.97%), Postives = 90/144 (62.50%), Query Frame = 3
Query:    3 EPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNAHSNKVKN---TLIFNSFVLCQIFNEFNARK-PDEKNIFKGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVIG 422
            EPPTD L++R P GR +PLI+  M +N+L  A YQ+ ++ +L F G ++ +++S   A  N   +   T++FN+FVL Q+FNE N+RK   EKN+F G+ +N +F  +V  T   QILI++  GK  S T L  + W+  + IG
Sbjct:  893 EPPTDSLLRRRPYGRNKPLISRTMMKNILGHAVYQLGIVFLLVFAGDKLFDIDSGRKAPLNSPPSQHYTIVFNTFVLMQLFNEINSRKIHGEKNVFAGVYRNIIFCSVVLGTFFCQILIVEVGGKPFSCTNLTMEQWMWCLFIG 1036          
BLAST of EY692113 vs. ExPASy Swiss-Prot
Match: AT2B2_OREMO (Plasma membrane calcium-transporting ATPase 2 (Fragment) OS=Oreochromis mossambicus GN=atp2b2 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.571e-24
Identity = 62/144 (43.06%), Postives = 95/144 (65.97%), Query Frame = 3
Query:    3 EPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNA--HSNKVKN-TLIFNSFVLCQIFNEFNARK-PDEKNIFKGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVIG 422
            EPPT+ L++R P GR +PLI++ M +N+L    YQ+ ++  L F G++I +++S  NA  HS   ++ T+IFN+FV+ Q+FNE NARK   E+N+F GI +N +F  IV  T  +QI+I+QF GK  S   L+ + W+  V +G
Sbjct:  911 EPPTESLLKRKPYGRNKPLISSTMTKNILGHGVYQLIIIFTLLFVGEQIFDIDSGRNAPLHSPPSEHYTIIFNTFVMMQLFNEINARKIHGERNVFDGIFRNPIFCSIVFGTFAVQIVIVQFGGKPFSCQPLDLEKWMWCVFLG 1054          
BLAST of EY692113 vs. ExPASy Swiss-Prot
Match: AT2B2_RAT (Plasma membrane calcium-transporting ATPase 2 OS=Rattus norvegicus GN=Atp2b2 PE=2 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 2.051e-24
Identity = 62/144 (43.06%), Postives = 93/144 (64.58%), Query Frame = 3
Query:    3 EPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNA--HSNKVKN-TLIFNSFVLCQIFNEFNARK-PDEKNIFKGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVIG 422
            EPPT+ L+ R P GR +PLI+  M +N+L  A YQ++++  L F G+++  ++S  NA  HS   ++ T+IFN+FV+ Q+FNE NARK   E+N+F GI +N +F  IV  T  +QI+I+QF GK  S + L    W+  + IG
Sbjct:  928 EPPTETLLLRKPYGRNKPLISRTMMKNILGHAVYQLTLIFTLLFVGEKMFQIDSGRNAPLHSPPSEHYTIIFNTFVMMQLFNEINARKIHGERNVFDGIFRNPIFCTIVLGTFAIQIVIVQFGGKPFSCSPLQLDQWMWCIFIG 1071          
BLAST of EY692113 vs. ExPASy Swiss-Prot
Match: AT2B2_MOUSE (Plasma membrane calcium-transporting ATPase 2 OS=Mus musculus GN=Atp2b2 PE=1 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 2.051e-24
Identity = 62/144 (43.06%), Postives = 93/144 (64.58%), Query Frame = 3
Query:    3 EPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNA--HSNKVKN-TLIFNSFVLCQIFNEFNARK-PDEKNIFKGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVIG 422
            EPPT+ L+ R P GR +PLI+  M +N+L  A YQ++++  L F G+++  ++S  NA  HS   ++ T+IFN+FV+ Q+FNE NARK   E+N+F GI +N +F  IV  T  +QI+I+QF GK  S + L    W+  + IG
Sbjct:  883 EPPTETLLLRKPYGRNKPLISRTMMKNILGHAVYQLTLIFTLLFVGEKMFQIDSGRNAPLHSPPSEHYTIIFNTFVMMQLFNEINARKIHGERNVFDGIFRNPIFCTIVLGTFAIQIVIVQFGGKPFSCSPLQLDQWMWCIFIG 1026          
BLAST of EY692113 vs. ExPASy Swiss-Prot
Match: AT2B2_HUMAN (Plasma membrane calcium-transporting ATPase 2 OS=Homo sapiens GN=ATP2B2 PE=1 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 2.051e-24
Identity = 62/144 (43.06%), Postives = 93/144 (64.58%), Query Frame = 3
Query:    3 EPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNA--HSNKVKN-TLIFNSFVLCQIFNEFNARK-PDEKNIFKGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVIG 422
            EPPT+ L+ R P GR +PLI+  M +N+L  A YQ++++  L F G+++  ++S  NA  HS   ++ T+IFN+FV+ Q+FNE NARK   E+N+F GI +N +F  IV  T  +QI+I+QF GK  S + L    W+  + IG
Sbjct:  928 EPPTETLLLRKPYGRNKPLISRTMMKNILGHAVYQLALIFTLLFVGEKMFQIDSGRNAPLHSPPSEHYTIIFNTFVMMQLFNEINARKIHGERNVFDGIFRNPIFCTIVLGTFAIQIVIVQFGGKPFSCSPLQLDQWMWCIFIG 1071          
BLAST of EY692113 vs. ExPASy Swiss-Prot
Match: AT2B1_RABIT (Plasma membrane calcium-transporting ATPase 1 OS=Oryctolagus cuniculus GN=ATP2B1 PE=2 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 2.679e-24
Identity = 61/144 (42.36%), Postives = 93/144 (64.58%), Query Frame = 3
Query:    3 EPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNA--HSNKVKN-TLIFNSFVLCQIFNEFNARK-PDEKNIFKGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVIG 422
            EPPT+ L+   P GR +PLI+  M +N+L  A YQ+ V+  L   G++  +++S  NA  H+   ++ T++FN FVL Q+FNE NARK   E+N+F+GI  N +F  IV  T V+QI+I+QF GK  S + L+ + W+ S+ +G
Sbjct:  905 EPPTESLLLGKPYGRNKPLISRTMMKNILGHAFYQLVVVFTLLLAGEKFFDIDSGRNAPLHAPPSEHYTIVFNIFVLMQLFNEINARKIHGERNVFEGIFNNAIFCTIVLGTFVVQIIIVQFAGKPFSCSELSVEQWLWSIFLG 1048          
BLAST of EY692113 vs. ExPASy Swiss-Prot
Match: AT2B3_RAT (Plasma membrane calcium-transporting ATPase 3 OS=Rattus norvegicus GN=Atp2b3 PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.330e-23
Identity = 61/144 (42.36%), Postives = 93/144 (64.58%), Query Frame = 3
Query:    3 EPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNA--HSNKVKN-TLIFNSFVLCQIFNEFNARK-PDEKNIFKGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVIG 422
            EPPT+ L+ R P GR +PLI+  M +N+L  A YQ++++  L F G+   +++S  NA  HS   ++ T+IFN+FV+ Q+FNE NARK   E+N+F GI  N +F  IV  T  +QI+I+QF GK  S + L+ + W+  + +G
Sbjct:  902 EPPTESLLLRKPYGRDKPLISRTMMKNILGHAVYQLTIIFTLLFVGELFFDIDSGRNAPLHSPPSEHYTIIFNTFVMMQLFNEINARKIHGERNVFDGIFSNPIFCTIVLGTFGIQIVIVQFGGKPFSCSPLSTEQWLWCLFVG 1045          
BLAST of EY692113 vs. ExPASy Swiss-Prot
Match: AT2B3_HUMAN (Plasma membrane calcium-transporting ATPase 3 OS=Homo sapiens GN=ATP2B3 PE=1 SV=3)

HSP 1 Score: 110.153 bits (274), Expect = 1.330e-23
Identity = 61/144 (42.36%), Postives = 93/144 (64.58%), Query Frame = 3
Query:    3 EPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNA--HSNKVKN-TLIFNSFVLCQIFNEFNARK-PDEKNIFKGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVIG 422
            EPPT+ L+ R P GR +PLI+  M +N+L  A YQ++++  L F G+   +++S  NA  HS   ++ T+IFN+FV+ Q+FNE NARK   E+N+F GI  N +F  IV  T  +QI+I+QF GK  S + L+ + W+  + +G
Sbjct:  902 EPPTESLLLRKPYGRDKPLISRTMMKNILGHAVYQLAIIFTLLFVGELFFDIDSGRNAPLHSPPSEHYTIIFNTFVMMQLFNEINARKIHGERNVFDGIFSNPIFCTIVLGTFGIQIVIVQFGGKPFSCSPLSTEQWLWCLFVG 1045          
BLAST of EY692113 vs. ExPASy Swiss-Prot
Match: ATC2_SCHPO (Calcium-transporting ATPase 2 OS=Schizosaccharomyces pombe GN=pmc1 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.962e-23
Identity = 64/180 (35.56%), Postives = 98/180 (54.44%), Query Frame = 3
Query:    3 EPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNAHSNKVKNTLIFNSFVLCQIFNEFNARKPDEK-NIFKGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVIGFISWPLAILGKLIP-------VPATPFSNIFNIFKRRRF 518
            +PPT  +++R P      L T  MW+ ++ Q+ YQ++V LVL+F G  I +  S++        NT++FN+FV  Q+FNE N R+ D K NIF+ I  N LF+ I  +   +Q++I+ F G   S  R++ K W IS+V G IS PL  L + +P       +P      +F+     RF
Sbjct:  991 DPPTPEVLKRKPEKPGASLFTFDMWKMIICQSMYQLAVTLVLHFAGNSIFHYPSNT-----ADMNTIVFNTFVWLQLFNEINNRRLDNKLNIFERINHNFLFIAIFVIVAGIQVIIVFFGGAAFSVKRIDGKGWAISIVFGVISIPLGALIRCVPNNFLRKVLPVKTIDTVFSWILNPRF 1165          
The following BLAST results are available for this feature:
BLAST of EY692113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
ATC1_DICDI9.207e-2539.75Calcium-transporting ATPase PAT1 OS=Dictyostelium ... [more]
AT2B4_RAT1.571e-2440.97Plasma membrane calcium-transporting ATPase 4 OS=R... [more]
AT2B2_OREMO1.571e-2443.06Plasma membrane calcium-transporting ATPase 2 (Fra... [more]
AT2B2_RAT2.051e-2443.06Plasma membrane calcium-transporting ATPase 2 OS=R... [more]
AT2B2_MOUSE2.051e-2443.06Plasma membrane calcium-transporting ATPase 2 OS=M... [more]
AT2B2_HUMAN2.051e-2443.06Plasma membrane calcium-transporting ATPase 2 OS=H... [more]
AT2B1_RABIT2.679e-2442.36Plasma membrane calcium-transporting ATPase 1 OS=O... [more]
AT2B3_RAT1.330e-2342.36Plasma membrane calcium-transporting ATPase 3 OS=R... [more]
AT2B3_HUMAN1.330e-2342.36Plasma membrane calcium-transporting ATPase 3 OS=H... [more]
ATC2_SCHPO2.962e-2335.56Calcium-transporting ATPase 2 OS=Schizosaccharomyc... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-106-H09-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692113 ID=EY692113; Name=EY692113; organism=Citrus sinensis; type=EST; length=767bp
CTGAACCACCAACTGATCACCTGATGCAGAGGTCCCCAGTTGGTCGAAGA
GAACCTCTTATAACTAATATAATGTGGAGGAATCTCTTAATACAGGCTTC
CTACCAAGTAAGTGTCCTGCTTGTCCTGAATTTTCAAGGGAAGAGGATTC
TGAACCTGGAGAGTGATTCCAATGCCCATTCCAACAAAGTAAAAAATACT
CTGATATTCAATTCTTTTGTCCTTTGCCAGATCTTTAATGAATTTAATGC
TCGGAAGCCTGATGAAAAAAATATTTTCAAAGGAATTACTAAGAACCGTC
TTTTTATGGGGATAGTGGCAGTAACTCTTGTACTTCAGATACTTATCATT
CAGTTTCTTGGGAAGTTCGCATCAACTACCAGGCTTAATTGGAAGCACTG
GATTATTTCCGTCGTCATTGGCTTCATCAGTTGGCCCCTCGCTATTCTGG
GGAAATTGATACCTGTGCCAGCAACTCCCTTCAGTAATATCTTCAATATA
TTCAAAAGAAGACGTTTCTCAACAAAGAAATTAGGAAAGTTAACCAATGG
GAAGGGGCCCGGAATTCCTTCTGGATCACTTGGTTTTGTCAATAATTTCA
GGCTTTGGAAAATGTGCTGTCCTTTTTTTTGGGTTGAATTTGAATAGAAA
AAAAAAAAAAAAAAAAAGGCGGGCGGCTCAAAAGGAATCCAAGCCTAACT
ACCCCTGGGTTGCCAAGTCAATACCTCTTCAATAGGGTCCCCCAAATTTC
ATTTTCCGGGGCCGCCC
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