EY692089

Overview
NameEY692089
Unique NameEY692089
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length938
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692089 vs. ExPASy Swiss-Prot
Match: ATG8H_ARATH (Autophagy-related protein 8h OS=Arabidopsis thaliana GN=ATG8H PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.644e-25
Identity = 50/92 (54.35%), Postives = 70/92 (76.09%), Query Frame = 2
Query:  176 YPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 451
            YPDRIPVI+EK   +D+P ++K KYLVP D+TVG F++++ KR++L   KA+F+FV N LP T + M ++Y+  K+EDGFLY+ YS E TFG
Sbjct:   28 YPDRIPVIIEKYSNADLPDMEKNKYLVPRDMTVGHFIHMLSKRMQLDPSKALFVFVHNTLPQTASRMDSLYNTFKEEDGFLYMCYSTEKTFG 119          
BLAST of EY692089 vs. ExPASy Swiss-Prot
Match: ATG8L_DICDI (Autophagy-related protein 8-like protein DDB_G0290491 OS=Dictyostelium discoideum GN=DDB_G0290491 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 5.282e-23
Identity = 52/96 (54.17%), Postives = 72/96 (75.00%), Query Frame = 2
Query:  176 YPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLS---AEKAIFIFVD-NVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 451
            Y DR+P+IVE+A  SD+P I+KKK+L P+++ +  F+  IRK +  S    +KAIF+FV+ N LPP+  ++S+IYD  KDEDGFLY+ YSGENTFG
Sbjct:   28 YKDRLPIIVERAANSDVPDINKKKFLAPSNMVITNFIMEIRKHLDDSDHNEQKAIFLFVNKNNLPPSSQLLSSIYDAHKDEDGFLYICYSGENTFG 123          
BLAST of EY692089 vs. ExPASy Swiss-Prot
Match: MLP3C_HUMAN (Microtubule-associated proteins 1A/1B light chain 3C OS=Homo sapiens GN=MAP1LC3C PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.646e-16
Identity = 43/94 (45.74%), Postives = 66/94 (70.21%), Query Frame = 2
Query:  176 YPDRIPVIVEKAERSD-IPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDN-VLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 451
            +P++IPV+VE+  R   +P +DK K+LVP +LT+ QF+ +IR R+ L A +A ++ V+N  L    A M+ IY + KDEDGF+Y+TY+ + TFG
Sbjct:   33 FPNKIPVVVERYPRETFLPPLDKTKFLVPQELTMTQFLSIIRSRMVLRATEAFYLLVNNKSLVSMSATMAEIYRDYKDEDGFVYMTYASQETFG 126          
BLAST of EY692089 vs. ExPASy Swiss-Prot
Match: MLP3B_HUMAN (Microtubule-associated proteins 1A/1B light chain 3B OS=Homo sapiens GN=MAP1LC3B PE=1 SV=3)

HSP 1 Score: 79.337 bits (194), Expect = 3.432e-14
Identity = 35/94 (37.23%), Postives = 64/94 (68.09%), Query Frame = 2
Query:  176 YPDRIPVIVEKAE-RSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVD-NVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 451
            +P +IPVI+E+ +    +P +DK K+LVP  + + + + +IR+R++L+A +A F+ V+ + +      +S +Y+ +KDEDGFLY+ Y+ + TFG
Sbjct:   27 HPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESEKDEDGFLYMVYASQETFG 120          
BLAST of EY692089 vs. ExPASy Swiss-Prot
Match: MLP3B_RAT (Microtubule-associated proteins 1A/1B light chain 3B OS=Rattus norvegicus GN=Map1lc3b PE=1 SV=3)

HSP 1 Score: 78.1814 bits (191), Expect = 7.646e-14
Identity = 34/94 (36.17%), Postives = 64/94 (68.09%), Query Frame = 2
Query:  176 YPDRIPVIVEKAE-RSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVD-NVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 451
            +P +IPVI+E+ +    +P +DK K+LVP  + + + + +IR+R++L+A +A F+ V+ + +      +S +Y+ ++DEDGFLY+ Y+ + TFG
Sbjct:   27 HPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESERDEDGFLYMVYASQETFG 120          
BLAST of EY692089 vs. ExPASy Swiss-Prot
Match: MLP3B_MOUSE (Microtubule-associated proteins 1A/1B light chain 3B OS=Mus musculus GN=Map1lc3b PE=1 SV=3)

HSP 1 Score: 78.1814 bits (191), Expect = 7.646e-14
Identity = 34/94 (36.17%), Postives = 64/94 (68.09%), Query Frame = 2
Query:  176 YPDRIPVIVEKAE-RSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVD-NVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 451
            +P +IPVI+E+ +    +P +DK K+LVP  + + + + +IR+R++L+A +A F+ V+ + +      +S +Y+ ++DEDGFLY+ Y+ + TFG
Sbjct:   27 HPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESERDEDGFLYMVYASQETFG 120          
BLAST of EY692089 vs. ExPASy Swiss-Prot
Match: MLP3A_RAT (Microtubule-associated proteins 1A/1B light chain 3A OS=Rattus norvegicus GN=Map1lc3a PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.985e-14
Identity = 35/94 (37.23%), Postives = 64/94 (68.09%), Query Frame = 2
Query:  176 YPDRIPVIVEKAE-RSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVD-NVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 451
            +P +IPVI+E+ +    +P +DK K+LVP  + + + V +IR+R++L+  +A F+ V+ + +      ++ IY+++KDEDGFLY+ Y+ + TFG
Sbjct:   27 HPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFG 120          
BLAST of EY692089 vs. ExPASy Swiss-Prot
Match: MLP3A_MOUSE (Microtubule-associated proteins 1A/1B light chain 3A OS=Mus musculus GN=Map1lc3a PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.985e-14
Identity = 35/94 (37.23%), Postives = 64/94 (68.09%), Query Frame = 2
Query:  176 YPDRIPVIVEKAE-RSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVD-NVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 451
            +P +IPVI+E+ +    +P +DK K+LVP  + + + V +IR+R++L+  +A F+ V+ + +      ++ IY+++KDEDGFLY+ Y+ + TFG
Sbjct:   27 HPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFG 120          
BLAST of EY692089 vs. ExPASy Swiss-Prot
Match: MLP3A_HUMAN (Microtubule-associated proteins 1A/1B light chain 3A OS=Homo sapiens GN=MAP1LC3A PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 9.985e-14
Identity = 35/94 (37.23%), Postives = 64/94 (68.09%), Query Frame = 2
Query:  176 YPDRIPVIVEKAE-RSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVD-NVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 451
            +P +IPVI+E+ +    +P +DK K+LVP  + + + V +IR+R++L+  +A F+ V+ + +      ++ IY+++KDEDGFLY+ Y+ + TFG
Sbjct:   27 HPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFG 120          
BLAST of EY692089 vs. ExPASy Swiss-Prot
Match: MLP3A_BOVIN (Microtubule-associated proteins 1A/1B light chain 3A OS=Bos taurus GN=MAP1LC3A PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.985e-14
Identity = 35/94 (37.23%), Postives = 64/94 (68.09%), Query Frame = 2
Query:  176 YPDRIPVIVEKAE-RSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVD-NVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 451
            +P +IPVI+E+ +    +P +DK K+LVP  + + + V +IR+R++L+  +A F+ V+ + +      ++ IY+++KDEDGFLY+ Y+ + TFG
Sbjct:   27 HPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFG 120          
The following BLAST results are available for this feature:
BLAST of EY692089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
ATG8H_ARATH5.644e-2554.35Autophagy-related protein 8h OS=Arabidopsis thalia... [more]
ATG8L_DICDI5.282e-2354.17Autophagy-related protein 8-like protein DDB_G0290... [more]
MLP3C_HUMAN1.646e-1645.74Microtubule-associated proteins 1A/1B light chain ... [more]
MLP3B_HUMAN3.432e-1437.23Microtubule-associated proteins 1A/1B light chain ... [more]
MLP3B_RAT7.646e-1436.17Microtubule-associated proteins 1A/1B light chain ... [more]
MLP3B_MOUSE7.646e-1436.17Microtubule-associated proteins 1A/1B light chain ... [more]
MLP3A_RAT9.985e-1437.23Microtubule-associated proteins 1A/1B light chain ... [more]
MLP3A_MOUSE9.985e-1437.23Microtubule-associated proteins 1A/1B light chain ... [more]
MLP3A_HUMAN9.985e-1437.23Microtubule-associated proteins 1A/1B light chain ... [more]
MLP3A_BOVIN9.985e-1437.23Microtubule-associated proteins 1A/1B light chain ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-106-F03-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692089 ID=EY692089; Name=EY692089; organism=Citrus sinensis; type=EST; length=938bp
CTCATCTCCTTAATTTGATGCCCTTATTGAAATTTCTCTTTCACTTTCTT
CAAATTTAGTTTTCCGCTTCCTATTTTCCCCTTTTGGATAATTAACGACA
ATGAGTAAAAGCAACTTCAAGATTGAGCATGAATTCGAGAAAAGGCGTGC
TGAGGCGGAAAGAATTAGGGAGAAATACCCAGATAGAATTCCGGTGATAG
TGGAAAAGGCTGAGAGAAGTGATATTCCTACAATTGACAAGAAAAAATAT
TTAGTCCCTGCTGACTTAACAGTGGGTCAGTTTGTGTATGTGATACGGAA
GAGAATTAAACTGAGCGCAGAAAAGGCAATCTTTATATTTGTGGACAATG
TTCTCCCGCCTACAGGAGCAATAATGTCTACCATATATGATGAAAAGAAG
GATGAAGATGGGTTTCTCTATGTTACTTACAGTGGTGAAAACACATTTGG
ATAGCATAATCTGCCGCTACCCTTTTTCCTCTACCAACGTTTCGTTTGTT
AATCTACTCATCTTGAATTTAGTGTTTCCGGTTTCTGGCTTTGTGCCGGT
CATAATCCGGCTTCTTAATTTCATGAACCTTTTTATGCTTGGATATAACC
GGGTTCAAACTATGGGGTATCAAACGGAAGATTGGCGAATAATTTAAAAT
TCGAATGGGAAAGGGTGGGTAAAAAAAAAAAAAAAAAAGGGGGCGGGCGC
TCAAGAGGAACCCAGCTTTATTACCGCGGGCGGGCGAACGTCATAACGTT
CTTTATAAAGGGGGCCCCCCAAAATTCAAATTCCCGGGGCCGGCCTTTTT
AACACGGACGGGGACGGGGGGGAAAACCCCGGGGGGTTAACCCAAATTTT
AAACACCCCTTGGGAAGCACATTCCCCCCTTTTTCCCCAGAGGGGGGGGG
TAAAAAAAAACCAAAAAAAAGGCGCCCCCCACCCCCAT
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