EY692081

Overview
NameEY692081
Unique NameEY692081
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length967
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9204 contig Csv1_Contig9204:1..967. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY692081 vs. ExPASy Swiss-Prot
Match: CAPP_BRAJA (Phosphoenolpyruvate carboxylase OS=Bradyrhizobium japonicum GN=ppc PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.262e-15
Identity = 42/113 (37.17%), Postives = 73/113 (64.60%), Query Frame = 1
Query:    1 IEMVLGKADTHIAKRYDEVLVSES-RQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITINGIAAGMRNTG 336
            ++MVL K+   IA RY E++  E+ R+++   +RRE  +  + +L + G ++L + N  L R +  R PYL+P+N +QVE+L+  R  + + ++   + +TINGI+AG+RNTG
Sbjct:  820 MDMVLAKSSIAIASRYAELVPDEALREKIFGRIRREWHSCIETLLDIMGQDRLLQGNPLLERSVRHRFPYLDPLNHVQVELLREHRAQNPDEQVLRGIQLTINGISAGLRNTG 932          
BLAST of EY692081 vs. ExPASy Swiss-Prot
Match: CAPP_VIBCH (Phosphoenolpyruvate carboxylase OS=Vibrio cholerae GN=ppc PE=3 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 5.566e-15
Identity = 50/113 (44.25%), Postives = 68/113 (60.18%), Query Frame = 1
Query:    1 IEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDD-DNHKLRDALLITINGIAAGMRNTG 336
            +EMV  K    IA  YDE LV  + + LG +LR +L    K VL V  +E L +++   +  I  R  Y+ P+NMLQ E+L R RQ +    +L +AL++TI GIAAGMRNTG
Sbjct:  764 LEMVYTKCSVSIACHYDERLVEPTLRPLGEKLRAQLQQDIKVVLNVENNENLMQSDPWGQESIRLRNIYIEPLNMLQAELLYRTRQSELPAPELEEALMVTIAGIAAGMRNTG 876          
BLAST of EY692081 vs. ExPASy Swiss-Prot
Match: CAPP_SHEPA (Phosphoenolpyruvate carboxylase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=ppc PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.566e-15
Identity = 45/113 (39.82%), Postives = 69/113 (61.06%), Query Frame = 1
Query:    1 IEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDD-DNHKLRDALLITINGIAAGMRNTG 336
            +EMV  KA+ +++K Y+  LV      LG +LR  L T  + VL ++  E L  +    R  +E R PY++P+N LQ E+L R R+++  +  +  AL++TI G+AAGMRNTG
Sbjct:  766 LEMVYAKAEPNLSKFYETSLVPSELHHLGVQLRERLATGVEAVLELTQAESLMAHTPWNRESVELRNPYIDPLNFLQAELLARTRREEQSSQNVELALMLTIAGVAAGMRNTG 878          
BLAST of EY692081 vs. ExPASy Swiss-Prot
Match: CAPP_PHOLL (Phosphoenolpyruvate carboxylase OS=Photorhabdus luminescens subsp. laumondii GN=ppc PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.566e-15
Identity = 49/113 (43.36%), Postives = 69/113 (61.06%), Query Frame = 1
Query:    1 IEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDD-DNHKLRDALLITINGIAAGMRNTG 336
            +EMV  KAD  +A+ YD  LV ++   LG +LR++L    K VL +S  E L  +   +   I  R  Y +P+N+LQVE+L R RQ    + ++  AL++TI GIAAGMRNTG
Sbjct:  766 LEMVFAKADLWLAEYYDHRLVDKNLWPLGQKLRKQLSADIKTVLAISKDEHLMADLPWIAESIALRNVYTDPLNVLQVELLLRSRQQQYSDPQVEQALMVTIAGIAAGMRNTG 878          
BLAST of EY692081 vs. ExPASy Swiss-Prot
Match: CAPP_HAEIG (Phosphoenolpyruvate carboxylase OS=Haemophilus influenzae (strain PittGG) GN=ppc PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.566e-15
Identity = 48/114 (42.11%), Postives = 71/114 (62.28%), Query Frame = 1
Query:    1 IEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDD--NHKLRDALLITINGIAAGMRNTG 336
            +EMV  K+DT ++++YD+ LV +    LG  LR++L    + VL +S   KL  +   +   I  R  Y +P+N+LQVE+L R R++ +  N  +  AL+ITI GIAAGMRNTG
Sbjct:  766 LEMVFSKSDTWLSQQYDQRLVKKELWYLGENLRKQLEDDIQTVLSLSHQSKLMSDLPWIADSIALRNIYTDPLNLLQVELLHRFRENPEQVNPDVEQALMITITGIAAGMRNTG 879          
BLAST of EY692081 vs. ExPASy Swiss-Prot
Match: CAPP_CHRVO (Phosphoenolpyruvate carboxylase OS=Chromobacterium violaceum GN=ppc PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.566e-15
Identity = 44/113 (38.94%), Postives = 68/113 (60.18%), Query Frame = 1
Query:    1 IEMVLGKADTHIAKRYDEVLVS-ESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITINGIAAGMRNTG 336
            +E VL KAD  IA+R+ E++   E    L   +  E   T      ++G  +L E N +LRR +E+RLP+L+ + +LQ ++L RLR + D+     A+ +TING +AG+RNTG
Sbjct:  786 MEQVLAKADLGIARRFSELVADRELAARLFGAIEAEWRKTHDAFFAITGQAELLEGNPTLRRSLETRLPFLDALGLLQADLLARLRAEPDDEDTLYAIHLTINGTSAGLRNTG 898          
BLAST of EY692081 vs. ExPASy Swiss-Prot
Match: CAPP_RHOPS (Phosphoenolpyruvate carboxylase OS=Rhodopseudomonas palustris (strain BisB5) GN=ppc PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 7.270e-15
Identity = 42/113 (37.17%), Postives = 70/113 (61.95%), Query Frame = 1
Query:    1 IEMVLGKADTHIAKRYDEVLVSES-RQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITINGIAAGMRNTG 336
            ++MVL K+   IA RY +++  E  R ++   +R E   +   +L + GHE+L + N  L R I  R PYL+P+N +QV++L+  R  D + ++   + +TINGI+AG+RN+G
Sbjct:  821 MDMVLSKSSIAIASRYADLVPDEELRHKIFGRIRIEWHASVDSLLAIMGHERLLQGNPLLERSIRHRFPYLDPLNHVQVQLLREHRTHDPDEQVLRGIQLTINGISAGLRNSG 933          
BLAST of EY692081 vs. ExPASy Swiss-Prot
Match: CAPP_PSEU2 (Phosphoenolpyruvate carboxylase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=ppc PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 7.270e-15
Identity = 50/114 (43.86%), Postives = 68/114 (59.65%), Query Frame = 1
Query:    1 IEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDD--NHKLRDALLITINGIAAGMRNTG 336
            +EMVL KAD  IA+ YDE LVS   Q LGA LR  L      VL ++G  +L  ++      I  R  YL+P+++LQ E+L R R  +   +  L  ALL+++ GIAAG+RNTG
Sbjct:  765 LEMVLAKADADIARLYDERLVSAELQHLGAHLRDLLSQACNVVLGLTGQTQLLAHSPETLEFISLRNTYLDPLHLLQAELLSRSRNREASLDSPLELALLVSVAGIAAGLRNTG 878          
BLAST of EY692081 vs. ExPASy Swiss-Prot
Match: CAPP_ACTP2 (Phosphoenolpyruvate carboxylase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=ppc PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 7.270e-15
Identity = 48/114 (42.11%), Postives = 70/114 (61.40%), Query Frame = 1
Query:    1 IEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDD--NHKLRDALLITINGIAAGMRNTG 336
            +EMV  KAD  +A+ YD+ LV++    LG  LR +L    + VL ++   +L  +   +   I  R  Y +P+N+LQVE+L+RLR   +  + +L  AL+ITI GIAAGMRNTG
Sbjct:  766 LEMVFSKADLWLAEHYDQRLVAKELHRLGKTLRAQLSADIQTVLTLAHDGQLMADLPWIAESIALRNVYTDPLNLLQVELLQRLRSQGEVRDPQLEQALMITITGIAAGMRNTG 879          
BLAST of EY692081 vs. ExPASy Swiss-Prot
Match: CAPP_VIBFM (Phosphoenolpyruvate carboxylase OS=Vibrio fischeri (strain MJ11) GN=ppc PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 9.495e-15
Identity = 48/113 (42.48%), Postives = 70/113 (61.95%), Query Frame = 1
Query:    1 IEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDD-NHKLRDALLITINGIAAGMRNTG 336
            +EMV  K +  +++ YD+ L  +S   LG  LR +L T  K VL V  ++ L E +      I  R  Y++P+NMLQ E+L R RQ ++ + +L +AL++TI GIAAGMRNTG
Sbjct:  764 LEMVYTKCNPQMSEYYDQRLTDKSLWPLGERLRNQLQTDIKAVLNVENNDHLMERDPWGSESIRLRNIYVDPLNMLQAELLFRTRQQEETSPELEEALMVTIAGIAAGMRNTG 876          
The following BLAST results are available for this feature:
BLAST of EY692081 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 191
Match NameE-valueIdentityDescription
CAPP_BRAJA4.262e-1537.17Phosphoenolpyruvate carboxylase OS=Bradyrhizobium ... [more]
CAPP_VIBCH5.566e-1544.25Phosphoenolpyruvate carboxylase OS=Vibrio cholerae... [more]
CAPP_SHEPA5.566e-1539.82Phosphoenolpyruvate carboxylase OS=Shewanella peal... [more]
CAPP_PHOLL5.566e-1543.36Phosphoenolpyruvate carboxylase OS=Photorhabdus lu... [more]
CAPP_HAEIG5.566e-1542.11Phosphoenolpyruvate carboxylase OS=Haemophilus inf... [more]
CAPP_CHRVO5.566e-1538.94Phosphoenolpyruvate carboxylase OS=Chromobacterium... [more]
CAPP_RHOPS7.270e-1537.17Phosphoenolpyruvate carboxylase OS=Rhodopseudomona... [more]
CAPP_PSEU27.270e-1543.86Phosphoenolpyruvate carboxylase OS=Pseudomonas syr... [more]
CAPP_ACTP27.270e-1542.11Phosphoenolpyruvate carboxylase OS=Actinobacillus ... [more]
CAPP_VIBFM9.495e-1542.48Phosphoenolpyruvate carboxylase OS=Vibrio fischeri... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-106-E07-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692081 ID=EY692081; Name=EY692081; organism=Citrus sinensis; type=EST; length=967bp
ATAGAGATGGTTTTAGGGAAGGCAGACACTCATATAGCCAAGCGCTATGA
TGAAGTCCTTGTTTCAGAGAGTAGGCAAGAGCTTGGTGCTGAGCTAAGGA
GGGAGCTCTTAACAACTGAGAAGTACGTACTTGTGGTTAGTGGGCATGAG
AAGCTATCTGAGAATAACCGCAGTTTGAGGAGGCTGATTGAGAGCAGACT
CCCATATCTCAATCCTATGAATATGTTGCAGGTGGAGATACTGAAGAGAT
TGAGACAGGATGATGATAACCATAAACTCAGAGATGCATTGCTCATCACT
ATAAATGGAATAGCTGCTGGTATGAGGAACACAGGTTAAGTCAATTCGCT
AGCTGGTTTAACACAGGTTAAGTTTAAATCGCTTGTATGCATATCGGGAA
GACAGGTTTAGTAAAATCTTGCTTGTCATCTGCTTATGTATGCCCGGAAA
CTACTCCTATTTCTATTTTTGTAATTTTCTTTTTAGAACTGCGGCTTGAT
GGTTGAGGGCACAACTAAATGTACTTGACATTTGGCTCTGGGGAAAAAAT
TTGTGGAAATTTTTTCGTTATGTAGTATTTTTGGGAGCTCCACAAAATAT
AATAATCTATAAGAAACACAAAATTAAATATGGGGCGGGCGCTCCTAAAG
GATCCAATTTTTACGTACCCATGGCTTGGAACGCCATATCTACTTCCAAA
GTGGGCCCCTAAATTTCAATTTCCTTGGGGACTTCCTTTTATTCGTCTGA
GAAGGATCGGGAAAAAACCCCGGGAGTTACCCCACATTATTTCCCCCCTG
TGTGCGACCCATCCCCCCCCTTTTTCCCCCACCTAGGGAGTAGATAAACA
AGAAAAAGGGCCCCCCCCCCCCTTCCACCCCCTCCACCCCACCATACAAT
TACCCGACCCCCCCTACAATGTGGGGCAATATACGTGCGACAACCCTCCC
CTCCCCGGTTTCATAGC
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