EY692081

Overview
NameEY692081
Unique NameEY692081
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length967
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY692081 vs. ExPASy Swiss-Prot
Match: CAPP_SHELP (Phosphoenolpyruvate carboxylase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=ppc PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 9.495e-15
Identity = 45/113 (39.82%), Postives = 68/113 (60.18%), Query Frame = 1 
Query:    1 IEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDD-DNHKLRDALLITINGIAAGMRNTG 336
            +EMV  KA+ ++AK Y+  LV +    LG  LR  + T  K VL ++  + L  +    R  +E R PY++P+N LQ E+L R R++   +  +  AL++TI G+AAGMRNTG
Sbjct:  766 LEMVYAKAEPNLAKYYETCLVPQELHHLGEALRSRMATGIKVVLELTQSDALMSHTPWNRESVELRNPYIDPLNFLQAELLARTRKEQAGSSNVELALMLTIAGVAAGMRNTG 878
[Close]
BLAST of EY692081 vs. ExPASy Swiss-Prot
Match: CAPP_SHEHH (Phosphoenolpyruvate carboxylase OS=Shewanella halifaxensis (strain HAW-EB4) GN=ppc PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 9.495e-15
Identity = 45/113 (39.82%), Postives = 70/113 (61.95%), Query Frame = 1 
Query:    1 IEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHK-LRDALLITINGIAAGMRNTG 336
            +EMV  KA+ +++K Y+  LV +    LG +LR  L    + VL ++  E L  +    R  +E R PY++P+N LQ E+L R R+++ + K +  AL++TI G+AAGMRNTG
Sbjct:  766 LEMVYAKAEPNLSKFYETSLVPKELHHLGVQLRERLAIGIEAVLELTQAESLMAHTPWNRESVELRNPYIDPLNFLQAELLARTRREEQSSKNVELALMLTIAGVAAGMRNTG 878
[Close]
BLAST of EY692081 vs. ExPASy Swiss-Prot
Match: CAPP_LACH4 (Phosphoenolpyruvate carboxylase OS=Lactobacillus helveticus (strain DPC 4571) GN=ppc PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 9.495e-15
Identity = 39/111 (35.14%), Postives = 71/111 (63.96%), Query Frame = 1 
Query:    4 EMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITINGIAAGMRNTG 336
            +MVL K++  IAK+Y E+   E  + +   + +E   T++ +L + GH+ L  +  +L+  + SR+PY N +N +Q+E++KR R+D+     +  + ITING+A+G+RN+G
Sbjct:  802 DMVLSKSNMEIAKQYAELCQDEKTKSVFDIIYQEWKLTKQIILQIEGHDDLLSDAPNLKNSLASRMPYFNILNYIQLEMIKRDREDEIKGVFQSIIPITINGVASGLRNSG 912
[Close]
BLAST of EY692081 vs. ExPASy Swiss-Prot
Match: CAPP_BURPS (Phosphoenolpyruvate carboxylase OS=Burkholderia pseudomallei GN=ppc PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.240e-14
Identity = 47/117 (40.17%), Postives = 71/117 (60.68%), Query Frame = 1 
Query:    1 IEMVLGKADTHIAKRYDEVLVSESRQE-----LGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITINGIAAGMRNTG 336
            ++MVL K D  +A RY +++  +  ++     + AE  R   T +    +   H +L+ N   L R I++R PYL+P+N LQVE++KR R  D N +LR  + +TINGIAAG+RNTG
Sbjct:  882 MDMVLAKTDLAVASRYAQLVADKKLRKHVFERIVAEWHR---TADALAEITGAHARLAANPL-LARSIKNRFPYLDPLNHLQVELIKRHRAGDTNARLRRGIHLTINGIAAGLRNTG 994
[Close]
BLAST of EY692081 vs. ExPASy Swiss-Prot
Match: CAPP_BURP6 (Phosphoenolpyruvate carboxylase OS=Burkholderia pseudomallei (strain 668) GN=ppc PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.240e-14
Identity = 47/117 (40.17%), Postives = 71/117 (60.68%), Query Frame = 1 
Query:    1 IEMVLGKADTHIAKRYDEVLVSESRQE-----LGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITINGIAAGMRNTG 336
            ++MVL K D  +A RY +++  +  ++     + AE  R   T +    +   H +L+ N   L R I++R PYL+P+N LQVE++KR R  D N +LR  + +TINGIAAG+RNTG
Sbjct:  882 MDMVLAKTDLAVASRYAQLVADKKLRKHVFERIVAEWHR---TADALAEITGAHARLAANPL-LARSIKNRFPYLDPLNHLQVELIKRHRAGDTNARLRRGIHLTINGIAAGLRNTG 994
[Close]
BLAST of EY692081 vs. ExPASy Swiss-Prot
Match: CAPP_BURMS (Phosphoenolpyruvate carboxylase OS=Burkholderia mallei (strain SAVP1) GN=ppc PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.240e-14
Identity = 47/117 (40.17%), Postives = 71/117 (60.68%), Query Frame = 1 
Query:    1 IEMVLGKADTHIAKRYDEVLVSESRQE-----LGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITINGIAAGMRNTG 336
            ++MVL K D  +A RY +++  +  ++     + AE  R   T +    +   H +L+ N   L R I++R PYL+P+N LQVE++KR R  D N +LR  + +TINGIAAG+RNTG
Sbjct:  882 MDMVLAKTDLAVASRYAQLVADKKLRKHVFERIVAEWHR---TADALAEITGAHARLAANPL-LARSIKNRFPYLDPLNHLQVELIKRHRAGDTNARLRRGIHLTINGIAAGLRNTG 994
[Close]
BLAST of EY692081 vs. ExPASy Swiss-Prot
Match: CAPP_BURMA (Phosphoenolpyruvate carboxylase OS=Burkholderia mallei GN=ppc PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.240e-14
Identity = 47/117 (40.17%), Postives = 71/117 (60.68%), Query Frame = 1 
Query:    1 IEMVLGKADTHIAKRYDEVLVSESRQE-----LGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITINGIAAGMRNTG 336
            ++MVL K D  +A RY +++  +  ++     + AE  R   T +    +   H +L+ N   L R I++R PYL+P+N LQVE++KR R  D N +LR  + +TINGIAAG+RNTG
Sbjct:  882 MDMVLAKTDLAVASRYAQLVADKKLRKHVFERIVAEWHR---TADALAEITGAHARLAANPL-LARSIKNRFPYLDPLNHLQVELIKRHRAGDTNARLRRGIHLTINGIAAGLRNTG 994
[Close]
BLAST of EY692081 vs. ExPASy Swiss-Prot
Match: CAPP_BURM9 (Phosphoenolpyruvate carboxylase OS=Burkholderia mallei (strain NCTC 10229) GN=ppc PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.240e-14
Identity = 47/117 (40.17%), Postives = 71/117 (60.68%), Query Frame = 1 
Query:    1 IEMVLGKADTHIAKRYDEVLVSESRQE-----LGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITINGIAAGMRNTG 336
            ++MVL K D  +A RY +++  +  ++     + AE  R   T +    +   H +L+ N   L R I++R PYL+P+N LQVE++KR R  D N +LR  + +TINGIAAG+RNTG
Sbjct:  882 MDMVLAKTDLAVASRYAQLVADKKLRKHVFERIVAEWHR---TADALAEITGAHARLAANPL-LARSIKNRFPYLDPLNHLQVELIKRHRAGDTNARLRRGIHLTINGIAAGLRNTG 994
[Close]
BLAST of EY692081 vs. ExPASy Swiss-Prot
Match: CAPP_BURM7 (Phosphoenolpyruvate carboxylase OS=Burkholderia mallei (strain NCTC 10247) GN=ppc PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.240e-14
Identity = 47/117 (40.17%), Postives = 71/117 (60.68%), Query Frame = 1 
Query:    1 IEMVLGKADTHIAKRYDEVLVSESRQE-----LGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITINGIAAGMRNTG 336
            ++MVL K D  +A RY +++  +  ++     + AE  R   T +    +   H +L+ N   L R I++R PYL+P+N LQVE++KR R  D N +LR  + +TINGIAAG+RNTG
Sbjct:  882 MDMVLAKTDLAVASRYAQLVADKKLRKHVFERIVAEWHR---TADALAEITGAHARLAANPL-LARSIKNRFPYLDPLNHLQVELIKRHRAGDTNARLRRGIHLTINGIAAGLRNTG 994
[Close]
BLAST of EY692081 vs. ExPASy Swiss-Prot
Match: CAPP_STRP1 (Phosphoenolpyruvate carboxylase OS=Streptococcus pyogenes serotype M1 GN=ppc PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.620e-14
Identity = 39/112 (34.82%), Postives = 70/112 (62.50%), Query Frame = 1 
Query:    1 IEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITINGIAAGMRNTG 336
            ++MVL K++ +IA +Y ++   +  +++  E+  E   T+  +L +  H+ L E+N SL+  ++SRLPY N +N +Q+E++KR R +  +      +  TINGIA G+RN+G
Sbjct:  809 VDMVLSKSNMNIAFQYAQLAERQDVRDVFYEILDEWQLTKNVILAIQDHDDLLEDNPSLKHSLKSRLPYFNVLNYIQIELIKRWRNNQLDENDEKLIHTTINGIATGLRNSG 920
The following BLAST results are available for this feature:
BLAST of EY692081 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 191
Match NameE-valueIdentityDescription
CAPP_SHELP9.495e-1539.82Phosphoenolpyruvate carboxylase OS=Shewanella loih... [more]
CAPP_SHEHH9.495e-1539.82Phosphoenolpyruvate carboxylase OS=Shewanella hali... [more]
CAPP_LACH49.495e-1535.14Phosphoenolpyruvate carboxylase OS=Lactobacillus h... [more]
CAPP_BURPS1.240e-1440.17Phosphoenolpyruvate carboxylase OS=Burkholderia ps... [more]
CAPP_BURP61.240e-1440.17Phosphoenolpyruvate carboxylase OS=Burkholderia ps... [more]
CAPP_BURMS1.240e-1440.17Phosphoenolpyruvate carboxylase OS=Burkholderia ma... [more]
CAPP_BURMA1.240e-1440.17Phosphoenolpyruvate carboxylase OS=Burkholderia ma... [more]
CAPP_BURM91.240e-1440.17Phosphoenolpyruvate carboxylase OS=Burkholderia ma... [more]
CAPP_BURM71.240e-1440.17Phosphoenolpyruvate carboxylase OS=Burkholderia ma... [more]
CAPP_STRP11.620e-1434.82Phosphoenolpyruvate carboxylase OS=Streptococcus p... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-106-E07-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692081 ID=EY692081; Name=EY692081; organism=Citrus sinensis; type=EST; length=967bp
ATAGAGATGGTTTTAGGGAAGGCAGACACTCATATAGCCAAGCGCTATGA
TGAAGTCCTTGTTTCAGAGAGTAGGCAAGAGCTTGGTGCTGAGCTAAGGA
GGGAGCTCTTAACAACTGAGAAGTACGTACTTGTGGTTAGTGGGCATGAG
AAGCTATCTGAGAATAACCGCAGTTTGAGGAGGCTGATTGAGAGCAGACT
CCCATATCTCAATCCTATGAATATGTTGCAGGTGGAGATACTGAAGAGAT
TGAGACAGGATGATGATAACCATAAACTCAGAGATGCATTGCTCATCACT
ATAAATGGAATAGCTGCTGGTATGAGGAACACAGGTTAAGTCAATTCGCT
AGCTGGTTTAACACAGGTTAAGTTTAAATCGCTTGTATGCATATCGGGAA
GACAGGTTTAGTAAAATCTTGCTTGTCATCTGCTTATGTATGCCCGGAAA
CTACTCCTATTTCTATTTTTGTAATTTTCTTTTTAGAACTGCGGCTTGAT
GGTTGAGGGCACAACTAAATGTACTTGACATTTGGCTCTGGGGAAAAAAT
TTGTGGAAATTTTTTCGTTATGTAGTATTTTTGGGAGCTCCACAAAATAT
AATAATCTATAAGAAACACAAAATTAAATATGGGGCGGGCGCTCCTAAAG
GATCCAATTTTTACGTACCCATGGCTTGGAACGCCATATCTACTTCCAAA
GTGGGCCCCTAAATTTCAATTTCCTTGGGGACTTCCTTTTATTCGTCTGA
GAAGGATCGGGAAAAAACCCCGGGAGTTACCCCACATTATTTCCCCCCTG
TGTGCGACCCATCCCCCCCCTTTTTCCCCCACCTAGGGAGTAGATAAACA
AGAAAAAGGGCCCCCCCCCCCCTTCCACCCCCTCCACCCCACCATACAAT
TACCCGACCCCCCCTACAATGTGGGGCAATATACGTGCGACAACCCTCCC
CTCCCCGGTTTCATAGC
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