EY692075

Overview
NameEY692075
Unique NameEY692075
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length540
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLNA2_PEA (Glutamine synthetase leaf isozyme, chloroplastic OS=Pisum sativum GN=GS2 PE=2 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 3.165e-34
Identity = 66/84 (78.57%), Postives = 73/84 (86.90%), Query Frame = 3
Query:   33 LGKRHGEHTAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 284
            L  RH  H  AYGEGNERRLTG+HETA IN FSWGVANRG SIRVGRDTEK GKGY EDRRPASNMDPYVVT+++AE+T+LW+P
Sbjct:  331 LSLRHKIHIEAYGEGNERRLTGKHETASINDFSWGVANRGCSIRVGRDTEKNGKGYLEDRRPASNMDPYVVTALLAESTLLWEP 414          
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLNA2_ORYSJ (Glutamine synthetase, chloroplastic OS=Oryza sativa subsp. japonica GN=GLN2 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 9.210e-34
Identity = 66/84 (78.57%), Postives = 73/84 (86.90%), Query Frame = 3
Query:   33 LGKRHGEHTAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 284
            L  RH  H +AYGEGNERRLTG HETA I+ FSWGVANRG SIRVGRDTE +GKGY EDRRPASNMDPYVVT+++AETTILW+P
Sbjct:  329 LSLRHDLHISAYGEGNERRLTGLHETASIDNFSWGVANRGCSIRVGRDTEAKGKGYLEDRRPASNMDPYVVTALLAETTILWEP 412          
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLNA2_HORVU (Glutamine synthetase leaf isozyme, chloroplastic OS=Hordeum vulgare PE=2 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 1.571e-33
Identity = 66/84 (78.57%), Postives = 72/84 (85.71%), Query Frame = 3
Query:   33 LGKRHGEHTAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 284
            L  RH  H AAYGEGNERRLTG HETA I+ FSWGVANRG SIRVGRDTE +GKGY EDRRPASNMDPY VT+++AETTILW+P
Sbjct:  335 LSLRHDLHIAAYGEGNERRLTGLHETASISDFSWGVANRGCSIRVGRDTEAKGKGYLEDRRPASNMDPYTVTALLAETTILWEP 418          
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLNA_DUNSA (Glutamine synthetase (Fragment) OS=Dunaliella salina PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 5.230e-29
Identity = 60/91 (65.93%), Postives = 71/91 (78.02%), Query Frame = 3
Query:    3 GEFPRVDPRVLGKRHGEHTAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTIL 275
            G+  R   + LGKRH  H AAYGEGNERRLTG+HET+ +N FSWGVANRG SIRVGR    E  GY+EDRRP+SN+DPYVVT ++ ETT+L
Sbjct:  144 GKQSRSSAKKLGKRHRWHIAAYGEGNERRLTGKHETSSMNDFSWGVANRGCSIRVGRMVPVEKCGYYEDRRPSSNLDPYVVTRLLVETTLL 234          
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLNA1_CHLRE (Glutamine synthetase cytosolic isozyme OS=Chlamydomonas reinhardtii GN=GLN1 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 8.349e-27
Identity = 57/81 (70.37%), Postives = 64/81 (79.01%), Query Frame = 3
Query:   33 LGKRHGEHTAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTIL 275
            L  RH  H AAYGEGNERRLTG+HET+ ++ FSWGVANRG SIRVGR    E  GY+EDRRPASN+D YVVT +I ETTIL
Sbjct:  301 LEARHAVHIAAYGEGNERRLTGKHETSSMSDFSWGVANRGCSIRVGRMVPVEKSGYYEDRRPASNLDAYVVTRLIVETTIL 381          
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLNA_AGABI (Glutamine synthetase OS=Agaricus bisporus GN=glnA PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 5.412e-26
Identity = 59/83 (71.08%), Postives = 64/83 (77.11%), Query Frame = 3
Query:   33 LGKRHGEHTAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWK 281
            L KRH EH A YGE N+ RLTGRHET  I+ FS GVANRGASIRV R    +G GY EDRRPASN+DPY VTS+IAETTIL K
Sbjct:  272 LAKRHDEHIAVYGEDNDLRLTGRHETGHISNFSSGVANRGASIRVPRHVASQGYGYLEDRRPASNIDPYRVTSIIAETTILDK 354          
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLNA_AMAMU (Glutamine synthetase OS=Amanita muscaria GN=GLN1 PE=2 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 9.231e-26
Identity = 59/83 (71.08%), Postives = 62/83 (74.70%), Query Frame = 3
Query:   33 LGKRHGEHTAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWK 281
            L KRH EH A YGE NE RLTGRHET  I TFS GVANRGASIRV R    +G GY EDRRPASN+DPY VT +I ETTIL K
Sbjct:  272 LAKRHDEHIAVYGEDNEMRLTGRHETGHIGTFSSGVANRGASIRVPRHVANKGYGYLEDRRPASNIDPYRVTGIIIETTILDK 354          
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLNA_EMENI (Glutamine synthetase OS=Emericella nidulans GN=glnA PE=3 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 1.206e-25
Identity = 54/78 (69.23%), Postives = 62/78 (79.49%), Query Frame = 3
Query:   33 LGKRHGEHTAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAET 266
            L  RH EH A YGEGNE RLTGRHET +I+ FS+GVA+RG SIR+ R   K+GKGYFEDRRPASN DPY +T +IAET
Sbjct:  262 LEARHVEHIAVYGEGNEERLTGRHETGNIDKFSYGVADRGGSIRIPRQVAKDGKGYFEDRRPASNADPYQITGIIAET 339          
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLNA_KLULA (Glutamine synthetase OS=Kluyveromyces lactis GN=GLN1 PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.575e-25
Identity = 54/78 (69.23%), Postives = 62/78 (79.49%), Query Frame = 3
Query:   33 LGKRHGEHTAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAET 266
            L KRH EH   YG  NE+RLTGRHETA ++TFS GVANRGASIR+ R   KEG GYFEDRRPASN+DPY+VT ++ ET
Sbjct:  276 LSKRHNEHIKLYGADNEQRLTGRHETASMSTFSSGVANRGASIRIPRSVNKEGYGYFEDRRPASNIDPYLVTGIMCET 353          
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLNA_HEBCY (Glutamine synthetase OS=Hebeloma cylindrosporum GN=GLN1 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 5.984e-25
Identity = 56/81 (69.14%), Postives = 61/81 (75.31%), Query Frame = 3
Query:   33 LGKRHGEHTAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTIL 275
            L KRH EH A YGE N+ RLTGRHET  I  FS GVANRGASIRV R    +G GY EDRRPASN+DPY VTS+I ETT+L
Sbjct:  272 LSKRHDEHIAVYGEDNDLRLTGRHETGHIGAFSSGVANRGASIRVPRHVAAQGYGYLEDRRPASNIDPYRVTSIIVETTLL 352          
The following BLAST results are available for this feature:
BLAST of EY692075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GLNA2_PEA3.165e-3478.57Glutamine synthetase leaf isozyme, chloroplastic O... [more]
GLNA2_ORYSJ9.210e-3478.57Glutamine synthetase, chloroplastic OS=Oryza sativ... [more]
GLNA2_HORVU1.571e-3378.57Glutamine synthetase leaf isozyme, chloroplastic O... [more]
GLNA_DUNSA5.230e-2965.93Glutamine synthetase (Fragment) OS=Dunaliella sali... [more]
GLNA1_CHLRE8.349e-2770.37Glutamine synthetase cytosolic isozyme OS=Chlamydo... [more]
GLNA_AGABI5.412e-2671.08Glutamine synthetase OS=Agaricus bisporus GN=glnA ... [more]
GLNA_AMAMU9.231e-2671.08Glutamine synthetase OS=Amanita muscaria GN=GLN1 P... [more]
GLNA_EMENI1.206e-2569.23Glutamine synthetase OS=Emericella nidulans GN=gln... [more]
GLNA_KLULA1.575e-2569.23Glutamine synthetase OS=Kluyveromyces lactis GN=GL... [more]
GLNA_HEBCY5.984e-2569.14Glutamine synthetase OS=Hebeloma cylindrosporum GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-106-D11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692075 ID=EY692075; Name=EY692075; organism=Citrus sinensis; type=EST; length=540bp
CCGGGGAATTCCCGAGGGTCGACCCACGCGTCCTGGGGAAACGCCATGGG
GAACACACTGCTGCTTATGGAGAGGGCAACGAAAGAAGACTGACAGGTCG
ACATGAAACTGCAGATATCAACACTTTTTCTTGGGGTGTCGCTAACAGAG
GTGCCTCCATTCGCGTTGGTCGTGACACTGAGAAAGAAGGAAAGGGATAC
TTTGAAGACAGAAGGCCAGCTTCAAACATGGACCCATATGTTGTGACTTC
AATGATCGCTGAAACCACCATTCTCTGGAAGCCTTAGAAAACAAACTTGA
GCATGGATGACGAAGAAGAAATCGAGGGAAAATGAAAGCTTAAATTGAAC
CCACCACAAAAATAATTCTTATGTTTTTATAATTTGTCAATGCGTTTAAG
TCTGTTGTTTGAATTTGTTCCTTGCCATTCAAAACTGTACTCTGTTTCTC
TTGTTCCTCATTCTTTGGGATGCTCAGTTGTGATTACTATATTATAGTTT
AAAACTATTTCCCTTCTGTTTAAAAAAAAAAAAAAAAGGG
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