EY692075

Overview
NameEY692075
Unique NameEY692075
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length540
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLNA_MIMIV (Putative glutamine synthetase OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R565 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.876e-19
Identity = 44/78 (56.41%), Postives = 55/78 (70.51%), Query Frame = 3
Query:   33 LGKRHGEHTAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAET 266
            L  +H EH   YG  N+ RLTG HETA I+ FS G+ +R  S+R+  DT K G GYFEDRRPA+N+DPY VTS+I +T
Sbjct:  271 LRTKHSEHMKVYGIDNDLRLTGDHETASIDEFSHGIGSRQCSVRIPNDTVKNGYGYFEDRRPAANIDPYQVTSIILQT 348          
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLNA_CAEEL (Probable glutamine synthetase OS=Caenorhabditis elegans GN=gln-2 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.876e-19
Identity = 44/68 (64.71%), Postives = 52/68 (76.47%), Query Frame = 3
Query:   69 GEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTI 272
            GE N RRLTGRHET+  + FSWGVANRG SIR+ R    E KGY EDRRP+SN DPY VT+MIA++ +
Sbjct:  299 GEDNLRRLTGRHETSSADKFSWGVANRGCSIRIPRQVAAERKGYLEDRRPSSNCDPYQVTAMIAQSIL 366          
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLNA_BOVIN (Glutamine synthetase OS=Bos taurus GN=GLUL PE=2 SV=4)

HSP 1 Score: 94.7449 bits (234), Expect = 2.876e-19
Identity = 49/85 (57.65%), Postives = 58/85 (68.24%), Query Frame = 3
Query:   33 LGKRHGEHTAAY----GEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTIL 275
            L KRH  H  AY    G  N RRLTG HET++IN FS GVANRGASIR+ R   +E KGYFEDRRP++N DP+ VT  +  T +L
Sbjct:  277 LSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGVANRGASIRIPRTVGQEKKGYFEDRRPSANCDPFAVTEALIRTCLL 361          
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLNA_RAT (Glutamine synthetase OS=Rattus norvegicus GN=Glul PE=1 SV=3)

HSP 1 Score: 94.3597 bits (233), Expect = 3.757e-19
Identity = 50/85 (58.82%), Postives = 57/85 (67.06%), Query Frame = 3
Query:   33 LGKRHGEHTAAY----GEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTIL 275
            L KRH  H  AY    G  N RRLTG HET++IN FS GVANR ASIR+ R   +E KGYFEDRRP++N DPY VT  I  T +L
Sbjct:  277 LSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGVANRSASIRIPRIVGQEKKGYFEDRRPSANCDPYAVTEAIVRTCLL 361          
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLNA_PIG (Glutamine synthetase OS=Sus scrofa GN=GLUL PE=2 SV=3)

HSP 1 Score: 93.9745 bits (232), Expect = 4.906e-19
Identity = 49/85 (57.65%), Postives = 58/85 (68.24%), Query Frame = 3
Query:   33 LGKRHGEHTAAY----GEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTIL 275
            L KRH  H  AY    G  N RRLTG HET++IN FS GVANRGASIR+ R   +E KGYFEDRRP++N DP+ VT  +  T +L
Sbjct:  277 LSKRHQYHIRAYDPKGGLDNTRRLTGFHETSNINDFSAGVANRGASIRIPRTGGQEKKGYFEDRRPSANCDPFAVTEALIRTCLL 361          
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLNA_CANFA (Glutamine synthetase OS=Canis familiaris GN=GLUL PE=1 SV=3)

HSP 1 Score: 93.9745 bits (232), Expect = 4.906e-19
Identity = 49/85 (57.65%), Postives = 58/85 (68.24%), Query Frame = 3
Query:   33 LGKRHGEHTAAY----GEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTIL 275
            L KRH  H  AY    G  N RRLTG HET++IN FS GVANRGASIR+ R   +E KGYFEDRRP++N DP+ VT  +  T +L
Sbjct:  277 LSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGVANRGASIRIPRTVGQEKKGYFEDRRPSANCDPFSVTEALIRTCLL 361          
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLNA2_FRAAL (Glutamine synthetase 2 OS=Frankia alni GN=glnII PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 4.906e-19
Identity = 43/78 (55.13%), Postives = 57/78 (73.08%), Query Frame = 3
Query:   33 LGKRHGEHTAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAET 266
            LG R  EH   YG+G E RLTG+HETA  N +SWG ++RGAS+R+    EK  KG+ EDRRP +NMDPY+VT+++ +T
Sbjct:  248 LGTRVTEHVTHYGKGIEDRLTGKHETAPWNKYSWGASDRGASVRIPWAVEKAKKGWLEDRRPNANMDPYLVTALMIDT 325          
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLNA_MACFA (Glutamine synthetase OS=Macaca fascicularis GN=GLUL PE=2 SV=3)

HSP 1 Score: 91.6633 bits (226), Expect = 2.435e-18
Identity = 48/85 (56.47%), Postives = 57/85 (67.06%), Query Frame = 3
Query:   33 LGKRHGEHTAAY----GEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTIL 275
            L KRH  H  AY    G  N RRLTG HET++IN FS GVANR ASIR+ R   +E KGYFEDRRP++N DP+ VT  +  T +L
Sbjct:  278 LSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGVANRSASIRIPRTVGQEKKGYFEDRRPSANCDPFSVTEALIRTCLL 362          
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLNA_HUMAN (Glutamine synthetase OS=Homo sapiens GN=GLUL PE=1 SV=4)

HSP 1 Score: 91.6633 bits (226), Expect = 2.435e-18
Identity = 48/85 (56.47%), Postives = 57/85 (67.06%), Query Frame = 3
Query:   33 LGKRHGEHTAAY----GEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTIL 275
            L KRH  H  AY    G  N RRLTG HET++IN FS GVANR ASIR+ R   +E KGYFEDRRP++N DP+ VT  +  T +L
Sbjct:  277 LSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGVANRSASIRIPRTVGQEKKGYFEDRRPSANCDPFSVTEALIRTCLL 361          
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLNA_CHICK (Glutamine synthetase OS=Gallus gallus GN=GLUL PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.435e-18
Identity = 48/85 (56.47%), Postives = 56/85 (65.88%), Query Frame = 3
Query:   33 LGKRHGEHTAAY----GEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTIL 275
            L KRH  H  AY    G  N RRLTG HET+ I+ FS GVANRGASIR+ R+   E KGYFEDR P++N DPY VT  +  T +L
Sbjct:  277 LSKRHQYHIRAYDPKGGLDNARRLTGFHETSSIHEFSAGVANRGASIRIPRNVGHEKKGYFEDRGPSANCDPYAVTEALVRTCLL 361          
The following BLAST results are available for this feature:
BLAST of EY692075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GLNA_MIMIV2.876e-1956.41Putative glutamine synthetase OS=Acanthamoeba poly... [more]
GLNA_CAEEL2.876e-1964.71Probable glutamine synthetase OS=Caenorhabditis el... [more]
GLNA_BOVIN2.876e-1957.65Glutamine synthetase OS=Bos taurus GN=GLUL PE=2 SV... [more]
GLNA_RAT3.757e-1958.82Glutamine synthetase OS=Rattus norvegicus GN=Glul ... [more]
GLNA_PIG4.906e-1957.65Glutamine synthetase OS=Sus scrofa GN=GLUL PE=2 SV... [more]
GLNA_CANFA4.906e-1957.65Glutamine synthetase OS=Canis familiaris GN=GLUL P... [more]
GLNA2_FRAAL4.906e-1955.13Glutamine synthetase 2 OS=Frankia alni GN=glnII PE... [more]
GLNA_MACFA2.435e-1856.47Glutamine synthetase OS=Macaca fascicularis GN=GLU... [more]
GLNA_HUMAN2.435e-1856.47Glutamine synthetase OS=Homo sapiens GN=GLUL PE=1 ... [more]
GLNA_CHICK2.435e-1856.47Glutamine synthetase OS=Gallus gallus GN=GLUL PE=2... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-106-D11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692075 ID=EY692075; Name=EY692075; organism=Citrus sinensis; type=EST; length=540bp
CCGGGGAATTCCCGAGGGTCGACCCACGCGTCCTGGGGAAACGCCATGGG
GAACACACTGCTGCTTATGGAGAGGGCAACGAAAGAAGACTGACAGGTCG
ACATGAAACTGCAGATATCAACACTTTTTCTTGGGGTGTCGCTAACAGAG
GTGCCTCCATTCGCGTTGGTCGTGACACTGAGAAAGAAGGAAAGGGATAC
TTTGAAGACAGAAGGCCAGCTTCAAACATGGACCCATATGTTGTGACTTC
AATGATCGCTGAAACCACCATTCTCTGGAAGCCTTAGAAAACAAACTTGA
GCATGGATGACGAAGAAGAAATCGAGGGAAAATGAAAGCTTAAATTGAAC
CCACCACAAAAATAATTCTTATGTTTTTATAATTTGTCAATGCGTTTAAG
TCTGTTGTTTGAATTTGTTCCTTGCCATTCAAAACTGTACTCTGTTTCTC
TTGTTCCTCATTCTTTGGGATGCTCAGTTGTGATTACTATATTATAGTTT
AAAACTATTTCCCTTCTGTTTAAAAAAAAAAAAAAAAGGG
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