EY692075

Overview
NameEY692075
Unique NameEY692075
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length540
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLNA_PANAR (Glutamine synthetase OS=Panulirus argus PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.153e-18
Identity = 47/85 (55.29%), Postives = 57/85 (67.06%), Query Frame = 3
Query:   33 LGKRHGEHTAAY----GEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTIL 275
            L K H +H  AY    G+ NERRLTG +ET+ I+ FS GVANRGASIR+ R   +E  GY EDRRP+SN DPYVV+  +  T  L
Sbjct:  274 LSKVHEKHIKAYDPHAGKDNERRLTGHYETSSIHDFSAGVANRGASIRIPRGVAEEKTGYLEDRRPSSNADPYVVSERLVRTICL 358          
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLNA2_STRVR (Glutamine synthetase 2 OS=Streptomyces viridochromogenes GN=glnII PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.153e-18
Identity = 41/77 (53.25%), Postives = 56/77 (72.73%), Query Frame = 3
Query:   36 GKRHGEHTAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAET 266
            G +  +H   YG G + RLTG HETA  N +S+GV++RGAS+R+    EK+GKGY EDRRP +N+DPYVVT ++ +T
Sbjct:  256 GSKPLDHVKNYGAGIDDRLTGLHETAPWNEYSYGVSDRGASVRIPWQVEKDGKGYIEDRRPNANVDPYVVTRLLVDT 332          
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLNA2_STRHY (Glutamine synthetase 2 OS=Streptomyces hygroscopicus GN=glnB PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.279e-16
Identity = 39/72 (54.17%), Postives = 51/72 (70.83%), Query Frame = 3
Query:   51 EHTAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAET 266
            EH   YG G E RLTG HETA  + +S+G ++RGAS+R+    E E KGY EDRRP +N+DPYVVT ++ +T
Sbjct:  258 EHVRQYGTGIEDRLTGAHETAPWDAYSYGASDRGASVRIPWQVEVEKKGYIEDRRPNANVDPYVVTRLMVDT 329          
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLNA3_LUPAN (Glutamine synthetase nodule isozyme (Fragment) OS=Lupinus angustifolius PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 3.887e-16
Identity = 39/43 (90.70%), Postives = 40/43 (93.02%), Query Frame = 3
Query:   33 LGKRHGEHTAAYGEGNERRLTGRHETADINTFSWGVANRGASI 161
            L KRH EH AAYGEGNERRLTGRHETADI+TFSWGVANRGASI
Sbjct:  273 LEKRHNEHIAAYGEGNERRLTGRHETADISTFSWGVANRGASI 315          
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLNA_CRIGR (Glutamine synthetase OS=Cricetulus griseus GN=GLUL PE=2 SV=4)

HSP 1 Score: 83.9593 bits (206), Expect = 5.077e-16
Identity = 45/85 (52.94%), Postives = 55/85 (64.71%), Query Frame = 3
Query:   33 LGKRHGEHTAAY----GEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTIL 275
            L KRH  H  AY    G  N RRLTG H+T++IN FS GVA+R ASIR+ R   +E KGYFE R P++N DP+ VT  I  T +L
Sbjct:  277 LSKRHRYHIRAYDPKGGLDNARRLTGFHKTSNINDFSAGVADRSASIRIPRTVGQEKKGYFEARCPSANCDPFAVTEAIVRTCLL 361          
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLNA2_BRAJA (Glutamine synthetase 2 OS=Bradyrhizobium japonicum GN=glnII PE=3 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 6.631e-16
Identity = 42/73 (57.53%), Postives = 50/73 (68.49%), Query Frame = 3
Query:   51 EHTAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEG-KGYFEDRRPASNMDPYVVTSMIAET 266
            +H A YG  N++RLTG+HETA  N FS+GVA+RGASIRV       G KGY EDRRP S  DPY + S I +T
Sbjct:  260 DHIAVYGPDNDKRLTGKHETAPWNKFSYGVADRGASIRVPHSFVNNGYKGYLEDRRPNSQGDPYQIASQILKT 332          
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLNA2_RHILP (Glutamine synthetase 2 OS=Rhizobium leguminosarum bv. phaseoli GN=glnII PE=1 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 4.752e-14
Identity = 38/66 (57.58%), Postives = 47/66 (71.21%), Query Frame = 3
Query:   51 EHTAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRD-TEKEGKGYFEDRRPASNMDPYVV 245
            +H A YG  N++RLTG+HETA  N FS+GVA+RGASIRV     + + KGY EDRRP S  DPY +
Sbjct:  257 DHIAVYGPDNDKRLTGKHETAPWNKFSYGVADRGASIRVPHSFIKNDYKGYLEDRRPNSQGDPYQI 322          
The following BLAST results are available for this feature:
BLAST of EY692075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GLNA_PANAR4.153e-1855.29Glutamine synthetase OS=Panulirus argus PE=2 SV=1[more]
GLNA2_STRVR4.153e-1853.25Glutamine synthetase 2 OS=Streptomyces viridochrom... [more]
GLNA2_STRHY2.279e-1654.17Glutamine synthetase 2 OS=Streptomyces hygroscopic... [more]
GLNA3_LUPAN3.887e-1690.70Glutamine synthetase nodule isozyme (Fragment) OS=... [more]
GLNA_CRIGR5.077e-1652.94Glutamine synthetase OS=Cricetulus griseus GN=GLUL... [more]
GLNA2_BRAJA6.631e-1657.53Glutamine synthetase 2 OS=Bradyrhizobium japonicum... [more]
GLNA2_RHILP4.752e-1457.58Glutamine synthetase 2 OS=Rhizobium leguminosarum ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-106-D11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692075 ID=EY692075; Name=EY692075; organism=Citrus sinensis; type=EST; length=540bp
CCGGGGAATTCCCGAGGGTCGACCCACGCGTCCTGGGGAAACGCCATGGG
GAACACACTGCTGCTTATGGAGAGGGCAACGAAAGAAGACTGACAGGTCG
ACATGAAACTGCAGATATCAACACTTTTTCTTGGGGTGTCGCTAACAGAG
GTGCCTCCATTCGCGTTGGTCGTGACACTGAGAAAGAAGGAAAGGGATAC
TTTGAAGACAGAAGGCCAGCTTCAAACATGGACCCATATGTTGTGACTTC
AATGATCGCTGAAACCACCATTCTCTGGAAGCCTTAGAAAACAAACTTGA
GCATGGATGACGAAGAAGAAATCGAGGGAAAATGAAAGCTTAAATTGAAC
CCACCACAAAAATAATTCTTATGTTTTTATAATTTGTCAATGCGTTTAAG
TCTGTTGTTTGAATTTGTTCCTTGCCATTCAAAACTGTACTCTGTTTCTC
TTGTTCCTCATTCTTTGGGATGCTCAGTTGTGATTACTATATTATAGTTT
AAAACTATTTCCCTTCTGTTTAAAAAAAAAAAAAAAAGGG
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