EY692063

Overview
NameEY692063
Unique NameEY692063
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1037
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692063 vs. ExPASy Swiss-Prot
Match: COL14_ARATH (Zinc finger protein CONSTANS-LIKE 14 OS=Arabidopsis thaliana GN=COL14 PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 5.551e-16
Identity = 37/89 (41.57%), Postives = 51/89 (57.30%), Query Frame = 1
Query:   31 CDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPF 297
            C+ C   TA +FCRAD+A LC+ CD  +H+AN L+ +H R  +C+ C + P  V C  D   LC  CD D+H +   +  HER  V  F
Sbjct:   12 CEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNCSKEPVSVRCFTDNLVLCQECDWDVHGSCSSSATHERSAVEGF 100          
BLAST of EY692063 vs. ExPASy Swiss-Prot
Match: COL13_ARATH (Zinc finger protein CONSTANS-LIKE 13 OS=Arabidopsis thaliana GN=COL13 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.237e-15
Identity = 36/91 (39.56%), Postives = 58/91 (63.74%), Query Frame = 1
Query:   25 KLCDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPF 297
            +LCD C S+ A V+C+ADSA LC+ CD ++H AN+L ++H R  +C+ C ++P+ + C+ + + LC  CD   H+A+  +  H R P   F
Sbjct:   11 RLCDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLLCDSCNESPSSLFCETERSVLCQNCDWQHHTAS--SSLHSRRPFEGF 99          
BLAST of EY692063 vs. ExPASy Swiss-Prot
Match: COL15_ARATH (Zinc finger protein CONSTANS-LIKE 15 OS=Arabidopsis thaliana GN=COL15 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.615e-15
Identity = 37/89 (41.57%), Postives = 50/89 (56.18%), Query Frame = 1
Query:   31 CDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPF 297
            CD C   TA +FCRAD+A LC+ CD ++H AN L+ +H R  +C+ C   P  V C  D   LC  CD D+H +  ++  H R  V  F
Sbjct:    9 CDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQICDNCGNEPVSVRCFTDNLILCQECDWDVHGSCSVSDAHVRSAVEGF 97          
BLAST of EY692063 vs. ExPASy Swiss-Prot
Match: COL10_ARATH (Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsis thaliana GN=COL10 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.699e-15
Identity = 38/99 (38.38%), Postives = 52/99 (52.53%), Query Frame = 1
Query:   28 LCDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCVTCDRDIHSA-NPLARRHERVPVTPFYDSVDSSA 321
            +CD C    + V+CR+D+A LC++CD  +H+AN L+ RH+R  VCE C   PA V C  +  +LC  CD   H   N     H +      Y    SSA
Sbjct:    4 MCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLVCERCNAQPASVRCSDERVSLCQNCDWSGHDGKNSTTTSHHKRQTINCYSGCPSSA 102          
BLAST of EY692063 vs. ExPASy Swiss-Prot
Match: COL9_ARATH (Zinc finger protein CONSTANS-LIKE 9 OS=Arabidopsis thaliana GN=COL9 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 5.196e-14
Identity = 32/74 (43.24%), Postives = 46/74 (62.16%), Query Frame = 1
Query:   28 LCDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCVTCDRDIHS 249
            +CD C    + V+CR+D+A LC++CD  +H+AN L+ RH+R  VCE C   PA V C  +  +LC  CD   H+
Sbjct:    4 MCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPATVRCVEERVSLCQNCDWSGHN 77          
BLAST of EY692063 vs. ExPASy Swiss-Prot
Match: COLX_ARATH (Putative zinc finger protein At1g68190 OS=Arabidopsis thaliana GN=At1g68190 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.183e-12
Identity = 32/86 (37.21%), Postives = 46/86 (53.49%), Query Frame = 1
Query:   13 EMASKLCDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARR 270
            E   ++C+ CK+  A V+C AD+A LC+ CD K+H+AN L+ RH R  +C+ C+  P  V C      LC  C+   H       R
Sbjct:    8 ENMERVCEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVLCDSCKNQPCVVRCFDHKMFLCHGCNDKFHGGGSSEHR 93          
BLAST of EY692063 vs. ExPASy Swiss-Prot
Match: COL11_ARATH (Putative zinc finger protein CONSTANS-LIKE 11 OS=Arabidopsis thaliana GN=COL11 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 2.183e-12
Identity = 31/80 (38.75%), Postives = 44/80 (55.00%), Query Frame = 1
Query:   31 CDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARR 270
            CD C +  A ++C++DSA LC+NCD  +H+AN L+ RH R  +CE C   P  V C  +  +LC  C     +   L  R
Sbjct:    5 CDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLLCEKCSLQPTAVHCMNENVSLCQGCQWTASNCTGLGHR 84          
BLAST of EY692063 vs. ExPASy Swiss-Prot
Match: COL12_ARATH (Zinc finger protein CONSTANS-LIKE 12 OS=Arabidopsis thaliana GN=COL12 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 4.863e-12
Identity = 32/89 (35.96%), Postives = 48/89 (53.93%), Query Frame = 1
Query:   31 CDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPF 297
            CD C ++ A ++C++D A LC+NCD  +H+AN L+ RH R  +CE C   PA + C  +  + C  C    H +N     H    + PF
Sbjct:    5 CDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSLICEKCFSQPAAIRCLDEKVSYCQGC--HWHESNCSELGHRVQSLNPF 91          
The following BLAST results are available for this feature:
BLAST of EY692063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
COL14_ARATH5.551e-1641.57Zinc finger protein CONSTANS-LIKE 14 OS=Arabidopsi... [more]
COL13_ARATH1.237e-1539.56Zinc finger protein CONSTANS-LIKE 13 OS=Arabidopsi... [more]
COL15_ARATH1.615e-1541.57Zinc finger protein CONSTANS-LIKE 15 OS=Arabidopsi... [more]
COL10_ARATH4.699e-1538.38Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsi... [more]
COL9_ARATH5.196e-1443.24Zinc finger protein CONSTANS-LIKE 9 OS=Arabidopsis... [more]
COLX_ARATH2.183e-1237.21Putative zinc finger protein At1g68190 OS=Arabidop... [more]
COL11_ARATH2.183e-1238.75Putative zinc finger protein CONSTANS-LIKE 11 OS=A... [more]
COL12_ARATH4.863e-1235.96Zinc finger protein CONSTANS-LIKE 12 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-106-C08-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692063 ID=EY692063; Name=EY692063; organism=Citrus sinensis; type=EST; length=1037bp
CCACGCGTCCGAGAAATGGCATCCAAGCTGTGTGACTCGTGCAAATCGGC
AACGGCGACTGTGTTCTGCCGGGCCGACTCGGCGTTCTTGTGTGTCAACT
GCGACACCAAAATCCACGCGGCCAACAAGCTGGCGTCGCGCCACGCGCGT
GTCTGGGTTTGCGAGGTGTGTGAGCAGGCGCCGGCCCACGTCACGTGCAA
GGCAGACGCTGCGGCGCTCTGCGTCACGTGCGACCGCGACATCCATTCCG
CCAACCCACTGGCCCGGCGCCACGAGCGAGTCCCCGTGACACCCTTCTAC
GACTCAGTCGACTCCTCTGCCGTCAAGCAAGGCAACGGCGGAGTAGTCAA
CTTCTTAGACGAAGACCGCTACTTGGACCACGTCGACGGGAGAAGCGGTG
ACGTCAGCAGGGAGGAAGCAGAGGCGGCTTCGTGGCTGCTGCCGATCCCG
AAGGTGGCGGATTTGAACACGGGTCAGGCGCAAGAGCCGTATGTGTTCCC
GGATATGGATCCGTATTTGGAATTAGATTACGGGCATGTGGATACGAATC
TAGAAGCCCAGGAACAAAAAAGTTCGGGGCACTGAAGGTGTTGTTCCCGT
ACAAACCAAAAACGTTAAGCCTAACGGCCAATTTGGTCAACGATGCATGG
TTTAGACCTCCATTTTCCCAGGCTCCCAATCTATAGGGGTAAGGGCTACA
ACATCCCACTCCACGGTGCCTTCAGTCAAAAAGGGGGTCCCCCCTCCACC
CTTGAAAGGGGGGGAAGGGGTGCCCTAATAGAAAATTAATTGCNAAAAAA
CGTAATAATAACTAATCCCTTACTGTATCAAGGGATCGGGGGGTGTGGTA
GGGAAGTAAATATAATGAAAATGGACGGGTCAAAATCTTCCTTAAATCTG
AAAAAACGTGAGACAGAAAGGGTTAGTATGAAGCAGACTAGAGAGAATGA
ATTGAATATAGATAAAAAGAACATAAAAATTTATGTGAAAAGATAAGACT
AAATGCTAAAAAATAAGCATACTATACATATAGTGAT
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