EY692042

Overview
NameEY692042
Unique NameEY692042
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1040
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY692042 vs. ExPASy Swiss-Prot
Match: SYN_SHESH (Asparaginyl-tRNA synthetase OS=Shewanella sediminis (strain HAW-EB3) GN=asnS PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 2.024e-34
Identity = 72/127 (56.69%), Postives = 85/127 (66.93%), Query Frame = 3 
Query:   51 MEFMANTPYKSCINRLRMVASPPFERISYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKTRIK 431
            +EF A    K+ I+RL    S  F ++ YT            GK FE  VEWGIDL SEHERYL E  F+ PV+V NYPK IKAFYMRLNDD KTVAAMDVL P +GE+IGG+QREER DV+  R++
Sbjct:  285 LEFFAQRVDKTVIDRLESFVSSDFAQVDYTDAVEILKSC---GKKFEYPVEWGIDLQSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGAQREERLDVLDARLE 408

HSP 2 Score: 29.6462 bits (65), Expect = 2.024e-34
Identity = 16/48 (33.33%), Postives = 23/48 (47.92%), Query Frame = 1 
Query:  433 DMGLPLEPYEWYLDLQRFGTVKQYRVWLKALNGRFLFATCIEHFRDAI 576
            +M L  E Y WY D++R+GTV      L        + T + + RD I
Sbjct:  409 EMNLSKEDYWWYRDMRRYGTVPHSGFGL-GFERLVSYVTGVSNIRDVI 455
[Close]
BLAST of EY692042 vs. ExPASy Swiss-Prot
Match: SYN_VIBPA (Asparaginyl-tRNA synthetase OS=Vibrio parahaemolyticus GN=asnS PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 2.024e-34
Identity = 71/130 (54.62%), Postives = 85/130 (65.38%), Query Frame = 3 
Query:   51 MEFMANTPYKSCINRLRMVASPPFERISYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKTRIKGHG 440
            +EF A    K  I RL    S  F ++ YT            G+ FE  VEWGID++SEHER+L E  F+ PVIV NYPK IKAFYMR+NDD KTVAAMDVL P +GE+IGGSQREER DV+  R++  G
Sbjct:  285 LEFFAQRIDKQAITRLEQFVSSDFAQVDYTDAIQILLD---SGREFEFPVEWGIDMSSEHERFLAEEHFKAPVIVKNYPKDIKAFYMRMNDDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARMREMG 411

HSP 2 Score: 30.8018 bits (68), Expect = 2.024e-34
Identity = 12/22 (54.55%), Postives = 16/22 (72.73%), Query Frame = 1 
Query:  430 RDMGLPLEPYEWYLDLQRFGTV 495
            R+MG+  E   WY DL+R+GTV
Sbjct:  408 REMGIDPEHMSWYRDLRRYGTV 429
[Close]
BLAST of EY692042 vs. ExPASy Swiss-Prot
Match: SYN_SHIDS (Asparaginyl-tRNA synthetase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=asnS PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 2.636e-34
Identity = 68/126 (53.97%), Postives = 83/126 (65.87%), Query Frame = 3 
Query:   51 MEFMANTPYKSCINRLRMVASPPFERISYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKTRI 428
            M+F A    K  ++RL       F ++ YT            G+ FEN V WG+DL+SEHERYL E  F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+  R+
Sbjct:  285 MKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENC---GRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDVRM 407

HSP 2 Score: 33.4982 bits (75), Expect = 2.636e-34
Identity = 18/48 (37.50%), Postives = 25/48 (52.08%), Query Frame = 1 
Query:  433 DMGLPLEPYEWYLDLQRFGTVKQYRVWLKALNGRFLFATCIEHFRDAI 576
            +MGL  E Y WY DL+R+GTV      L        + T +++ RD I
Sbjct:  409 EMGLNKEDYWWYRDLRRYGTVPHSGFGL-GFERLIAYVTGVQNVRDVI 455
[Close]
BLAST of EY692042 vs. ExPASy Swiss-Prot
Match: SYN_SHISS (Asparaginyl-tRNA synthetase OS=Shigella sonnei (strain Ss046) GN=asnS PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 3.433e-34
Identity = 68/126 (53.97%), Postives = 83/126 (65.87%), Query Frame = 3 
Query:   51 MEFMANTPYKSCINRLRMVASPPFERISYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKTRI 428
            M+F A    K  ++RL       F ++ YT            G+ FEN V WG+DL+SEHERYL E  F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+  R+
Sbjct:  285 MKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENC---GRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDERM 407

HSP 2 Score: 33.4982 bits (75), Expect = 3.433e-34
Identity = 18/48 (37.50%), Postives = 25/48 (52.08%), Query Frame = 1 
Query:  433 DMGLPLEPYEWYLDLQRFGTVKQYRVWLKALNGRFLFATCIEHFRDAI 576
            +MGL  E Y WY DL+R+GTV      L        + T +++ RD I
Sbjct:  409 EMGLNKEDYWWYRDLRRYGTVPHSGFGL-GFERLIAYVTGVQNVRDVI 455
[Close]
BLAST of EY692042 vs. ExPASy Swiss-Prot
Match: SYN_SHIFL (Asparaginyl-tRNA synthetase OS=Shigella flexneri GN=asnS PE=3 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 3.433e-34
Identity = 68/126 (53.97%), Postives = 83/126 (65.87%), Query Frame = 3 
Query:   51 MEFMANTPYKSCINRLRMVASPPFERISYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKTRI 428
            M+F A    K  ++RL       F ++ YT            G+ FEN V WG+DL+SEHERYL E  F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+  R+
Sbjct:  285 MKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENC---GRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDERM 407

HSP 2 Score: 33.4982 bits (75), Expect = 3.433e-34
Identity = 18/48 (37.50%), Postives = 25/48 (52.08%), Query Frame = 1 
Query:  433 DMGLPLEPYEWYLDLQRFGTVKQYRVWLKALNGRFLFATCIEHFRDAI 576
            +MGL  E Y WY DL+R+GTV      L        + T +++ RD I
Sbjct:  409 EMGLNKEDYWWYRDLRRYGTVPHSGFGL-GFERLIAYVTGVQNVRDVI 455
[Close]
BLAST of EY692042 vs. ExPASy Swiss-Prot
Match: SYN_SHIF8 (Asparaginyl-tRNA synthetase OS=Shigella flexneri serotype 5b (strain 8401) GN=asnS PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 3.433e-34
Identity = 68/126 (53.97%), Postives = 83/126 (65.87%), Query Frame = 3 
Query:   51 MEFMANTPYKSCINRLRMVASPPFERISYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKTRI 428
            M+F A    K  ++RL       F ++ YT            G+ FEN V WG+DL+SEHERYL E  F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+  R+
Sbjct:  285 MKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENC---GRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDERM 407

HSP 2 Score: 33.4982 bits (75), Expect = 3.433e-34
Identity = 18/48 (37.50%), Postives = 25/48 (52.08%), Query Frame = 1 
Query:  433 DMGLPLEPYEWYLDLQRFGTVKQYRVWLKALNGRFLFATCIEHFRDAI 576
            +MGL  E Y WY DL+R+GTV      L        + T +++ RD I
Sbjct:  409 EMGLNKEDYWWYRDLRRYGTVPHSGFGL-GFERLIAYVTGVQNVRDVI 455
[Close]
BLAST of EY692042 vs. ExPASy Swiss-Prot
Match: SYN_SHIBS (Asparaginyl-tRNA synthetase OS=Shigella boydii serotype 4 (strain Sb227) GN=asnS PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 3.433e-34
Identity = 68/126 (53.97%), Postives = 83/126 (65.87%), Query Frame = 3 
Query:   51 MEFMANTPYKSCINRLRMVASPPFERISYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKTRI 428
            M+F A    K  ++RL       F ++ YT            G+ FEN V WG+DL+SEHERYL E  F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+  R+
Sbjct:  285 MKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENC---GRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDERM 407

HSP 2 Score: 33.4982 bits (75), Expect = 3.433e-34
Identity = 18/48 (37.50%), Postives = 25/48 (52.08%), Query Frame = 1 
Query:  433 DMGLPLEPYEWYLDLQRFGTVKQYRVWLKALNGRFLFATCIEHFRDAI 576
            +MGL  E Y WY DL+R+GTV      L        + T +++ RD I
Sbjct:  409 EMGLNKEDYWWYRDLRRYGTVPHSGFGL-GFERLIAYVTGVQNVRDVI 455
[Close]
BLAST of EY692042 vs. ExPASy Swiss-Prot
Match: SYN_ECOUT (Asparaginyl-tRNA synthetase OS=Escherichia coli (strain UTI89 / UPEC) GN=asnS PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 3.433e-34
Identity = 68/126 (53.97%), Postives = 83/126 (65.87%), Query Frame = 3 
Query:   51 MEFMANTPYKSCINRLRMVASPPFERISYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKTRI 428
            M+F A    K  ++RL       F ++ YT            G+ FEN V WG+DL+SEHERYL E  F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+  R+
Sbjct:  285 MKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENC---GRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDERM 407

HSP 2 Score: 33.4982 bits (75), Expect = 3.433e-34
Identity = 18/48 (37.50%), Postives = 25/48 (52.08%), Query Frame = 1 
Query:  433 DMGLPLEPYEWYLDLQRFGTVKQYRVWLKALNGRFLFATCIEHFRDAI 576
            +MGL  E Y WY DL+R+GTV      L        + T +++ RD I
Sbjct:  409 EMGLNKEDYWWYRDLRRYGTVPHSGFGL-GFERLIAYVTGVQNVRDVI 455
[Close]
BLAST of EY692042 vs. ExPASy Swiss-Prot
Match: SYN_ECOLI (Asparaginyl-tRNA synthetase OS=Escherichia coli (strain K12) GN=asnS PE=1 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 3.433e-34
Identity = 68/126 (53.97%), Postives = 83/126 (65.87%), Query Frame = 3 
Query:   51 MEFMANTPYKSCINRLRMVASPPFERISYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKTRI 428
            M+F A    K  ++RL       F ++ YT            G+ FEN V WG+DL+SEHERYL E  F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+  R+
Sbjct:  285 MKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENC---GRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDERM 407

HSP 2 Score: 33.4982 bits (75), Expect = 3.433e-34
Identity = 18/48 (37.50%), Postives = 25/48 (52.08%), Query Frame = 1 
Query:  433 DMGLPLEPYEWYLDLQRFGTVKQYRVWLKALNGRFLFATCIEHFRDAI 576
            +MGL  E Y WY DL+R+GTV      L        + T +++ RD I
Sbjct:  409 EMGLNKEDYWWYRDLRRYGTVPHSGFGL-GFERLIAYVTGVQNVRDVI 455
[Close]
BLAST of EY692042 vs. ExPASy Swiss-Prot
Match: SYN_ECOLC (Asparaginyl-tRNA synthetase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=asnS PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 3.433e-34
Identity = 68/126 (53.97%), Postives = 83/126 (65.87%), Query Frame = 3 
Query:   51 MEFMANTPYKSCINRLRMVASPPFERISYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKTRI 428
            M+F A    K  ++RL       F ++ YT            G+ FEN V WG+DL+SEHERYL E  F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+  R+
Sbjct:  285 MKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENC---GRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDERM 407

HSP 2 Score: 33.4982 bits (75), Expect = 3.433e-34
Identity = 18/48 (37.50%), Postives = 25/48 (52.08%), Query Frame = 1 
Query:  433 DMGLPLEPYEWYLDLQRFGTVKQYRVWLKALNGRFLFATCIEHFRDAI 576
            +MGL  E Y WY DL+R+GTV      L        + T +++ RD I
Sbjct:  409 EMGLNKEDYWWYRDLRRYGTVPHSGFGL-GFERLIAYVTGVQNVRDVI 455
The following BLAST results are available for this feature:
BLAST of EY692042 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 254
Match NameE-valueIdentityDescription
SYN_SHESH2.024e-3456.69Asparaginyl-tRNA synthetase OS=Shewanella sedimini... [more]
SYN_VIBPA2.024e-3454.62Asparaginyl-tRNA synthetase OS=Vibrio parahaemolyt... [more]
SYN_SHIDS2.636e-3453.97Asparaginyl-tRNA synthetase OS=Shigella dysenteria... [more]
SYN_SHISS3.433e-3453.97Asparaginyl-tRNA synthetase OS=Shigella sonnei (st... [more]
SYN_SHIFL3.433e-3453.97Asparaginyl-tRNA synthetase OS=Shigella flexneri G... [more]
SYN_SHIF83.433e-3453.97Asparaginyl-tRNA synthetase OS=Shigella flexneri s... [more]
SYN_SHIBS3.433e-3453.97Asparaginyl-tRNA synthetase OS=Shigella boydii ser... [more]
SYN_ECOUT3.433e-3453.97Asparaginyl-tRNA synthetase OS=Escherichia coli (s... [more]
SYN_ECOLI3.433e-3453.97Asparaginyl-tRNA synthetase OS=Escherichia coli (s... [more]
SYN_ECOLC3.433e-3453.97Asparaginyl-tRNA synthetase OS=Escherichia coli (s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-106-A02-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692042 ID=EY692042; Name=EY692042; organism=Citrus sinensis; type=EST; length=1040bp
ACCCCGGCCGGTCCCGGTCCCGGGAATTCCGGGTCGACCCACGCCTCCGC
ATGGAGTTTATGGCTAACACCCCTTATAAAAGTTGCATTAACCGTCTAAG
AATGGTTGCTTCCCCTCCCTTTGAACGCATATCATACACTGAAGCAGTAG
AGCTACTAGAGGTTGCTGTGAAGGAGGGGAAACATTTTGAGAATAAAGTG
GAGTGGGGGATTGATTTGGCATCTGAGCATGAAAGATACTTAACTGAGGT
CAAATTTCAGAAGCCTGTCATTGTGTACAACTATCCAAAAGGAATCAAAG
CATTTTACATGAGGCTCAATGATGACTTGAAGACTGTGGCAGCTATGGAT
GTCCTTGTACCTAAGGTAGGAGAGTTAATTGGTGGGAGCCAAAGGGAAGA
GCGTTATGATGTAATCAAGACCAGAATAAAGGGACATGGGACTCCCTCTT
GAACCATACGAGTGGTACCTTGACCTGCAGCGCTTTGGGACAGTGAAACA
ATATCGTGTTTGGCTTAAGGCTTTGAACGGAAGATTTCTTTTTGCCACAT
GCATCGAACACTTTAGAGATGCTATCCCCTTTCCCCCAGAATCCCCGGAA
GAACCATATCCTCTAATCCTTGAATTTGCCAAATTGCACTTTATGAAAAA
ACCCCTGATTTTATACATCTTTTGGCTGATTCCCAGCATTGCTAGACCCC
CGACAAACCATAACTCACTGAACTTCCTTTTATCCCCCTATTCCTATAAG
AAAGAAGATATTTTCCCGGGATATAACCTCCCATGCCGACCTATAACCGG
GCTGCATTAATTTACTTATTTTAATCAAGATAAATCTTATAACTAATCAT
TTTTGATTGTGCATTACTACATGTGTGCTTCGGGACGGAATATCCACGAA
TTTTATTAAAAGATTTAAAATATAATAGACAAAAGATAATAGTGTCTAAA
AATCTTTTAGGAAAAAGGTATACAAAAAATAATACATAATAAACACAACA
AAAAAACAATTAAAAATAAGGGGAGGGAAGATAAAATCTA
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