EY692042

Overview
NameEY692042
Unique NameEY692042
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1040
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY692042 vs. ExPASy Swiss-Prot
Match: SYN_ECOL6 (Asparaginyl-tRNA synthetase OS=Escherichia coli O6 GN=asnS PE=3 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 3.433e-34
Identity = 68/126 (53.97%), Postives = 83/126 (65.87%), Query Frame = 3 
Query:   51 MEFMANTPYKSCINRLRMVASPPFERISYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKTRI 428
            M+F A    K  ++RL       F ++ YT            G+ FEN V WG+DL+SEHERYL E  F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+  R+
Sbjct:  285 MKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENC---GRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDERM 407

HSP 2 Score: 33.4982 bits (75), Expect = 3.433e-34
Identity = 18/48 (37.50%), Postives = 25/48 (52.08%), Query Frame = 1 
Query:  433 DMGLPLEPYEWYLDLQRFGTVKQYRVWLKALNGRFLFATCIEHFRDAI 576
            +MGL  E Y WY DL+R+GTV      L        + T +++ RD I
Sbjct:  409 EMGLNKEDYWWYRDLRRYGTVPHSGFGL-GFERLIAYVTGVQNVRDVI 455
[Close]
BLAST of EY692042 vs. ExPASy Swiss-Prot
Match: SYN_ECOL5 (Asparaginyl-tRNA synthetase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=asnS PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 3.433e-34
Identity = 68/126 (53.97%), Postives = 83/126 (65.87%), Query Frame = 3 
Query:   51 MEFMANTPYKSCINRLRMVASPPFERISYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKTRI 428
            M+F A    K  ++RL       F ++ YT            G+ FEN V WG+DL+SEHERYL E  F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+  R+
Sbjct:  285 MKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENC---GRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDERM 407

HSP 2 Score: 33.4982 bits (75), Expect = 3.433e-34
Identity = 18/48 (37.50%), Postives = 25/48 (52.08%), Query Frame = 1 
Query:  433 DMGLPLEPYEWYLDLQRFGTVKQYRVWLKALNGRFLFATCIEHFRDAI 576
            +MGL  E Y WY DL+R+GTV      L        + T +++ RD I
Sbjct:  409 EMGLNKEDYWWYRDLRRYGTVPHSGFGL-GFERLIAYVTGVQNVRDVI 455
[Close]
BLAST of EY692042 vs. ExPASy Swiss-Prot
Match: SYN_ECOHS (Asparaginyl-tRNA synthetase OS=Escherichia coli O9:H4 (strain HS) GN=asnS PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 3.433e-34
Identity = 68/126 (53.97%), Postives = 83/126 (65.87%), Query Frame = 3 
Query:   51 MEFMANTPYKSCINRLRMVASPPFERISYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKTRI 428
            M+F A    K  ++RL       F ++ YT            G+ FEN V WG+DL+SEHERYL E  F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+  R+
Sbjct:  285 MKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENC---GRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDERM 407

HSP 2 Score: 33.4982 bits (75), Expect = 3.433e-34
Identity = 18/48 (37.50%), Postives = 25/48 (52.08%), Query Frame = 1 
Query:  433 DMGLPLEPYEWYLDLQRFGTVKQYRVWLKALNGRFLFATCIEHFRDAI 576
            +MGL  E Y WY DL+R+GTV      L        + T +++ RD I
Sbjct:  409 EMGLNKEDYWWYRDLRRYGTVPHSGFGL-GFERLIAYVTGVQNVRDVI 455
[Close]
BLAST of EY692042 vs. ExPASy Swiss-Prot
Match: SYN_ECO57 (Asparaginyl-tRNA synthetase OS=Escherichia coli O157:H7 GN=asnS PE=3 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 3.433e-34
Identity = 68/126 (53.97%), Postives = 83/126 (65.87%), Query Frame = 3 
Query:   51 MEFMANTPYKSCINRLRMVASPPFERISYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKTRI 428
            M+F A    K  ++RL       F ++ YT            G+ FEN V WG+DL+SEHERYL E  F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+  R+
Sbjct:  285 MKFFAERVDKDAVSRLERFIEADFAQVDYTEAVTILENC---GRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDERM 407

HSP 2 Score: 33.4982 bits (75), Expect = 3.433e-34
Identity = 18/48 (37.50%), Postives = 25/48 (52.08%), Query Frame = 1 
Query:  433 DMGLPLEPYEWYLDLQRFGTVKQYRVWLKALNGRFLFATCIEHFRDAI 576
            +MGL  E Y WY DL+R+GTV      L        + T +++ RD I
Sbjct:  409 EMGLNKEDYWWYRDLRRYGTVPHSGFGL-GFERLIAYVTGVQNVRDVI 455
[Close]
BLAST of EY692042 vs. ExPASy Swiss-Prot
Match: SYN_ECO24 (Asparaginyl-tRNA synthetase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=asnS PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 3.433e-34
Identity = 68/126 (53.97%), Postives = 83/126 (65.87%), Query Frame = 3 
Query:   51 MEFMANTPYKSCINRLRMVASPPFERISYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKTRI 428
            M+F A    K  ++RL       F ++ YT            G+ FEN V WG+DL+SEHERYL E  F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+  R+
Sbjct:  285 MKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENC---GRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDERM 407

HSP 2 Score: 33.4982 bits (75), Expect = 3.433e-34
Identity = 18/48 (37.50%), Postives = 25/48 (52.08%), Query Frame = 1 
Query:  433 DMGLPLEPYEWYLDLQRFGTVKQYRVWLKALNGRFLFATCIEHFRDAI 576
            +MGL  E Y WY DL+R+GTV      L        + T +++ RD I
Sbjct:  409 EMGLNKEDYWWYRDLRRYGTVPHSGFGL-GFERLIAYVTGVQNVRDVI 455
[Close]
BLAST of EY692042 vs. ExPASy Swiss-Prot
Match: SYN_MANSM (Asparaginyl-tRNA synthetase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=asnS PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 4.472e-34
Identity = 71/121 (58.68%), Postives = 81/121 (66.94%), Query Frame = 3 
Query:   78 KSCINRLRMVASPPFERISYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKTRIKGHG 440
            K  INRL    +  F +I YT          K GK FE  V WGIDL+SEHERYL E  F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+  R+   G
Sbjct:  295 KDVINRLERFVASDFAQIDYTDAIDVLL---KSGKKFEFPVSWGIDLSSEHERYLAEEHFKSPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARMAEMG 412

HSP 2 Score: 31.187 bits (69), Expect = 4.472e-34
Identity = 16/48 (33.33%), Postives = 26/48 (54.17%), Query Frame = 1 
Query:  433 DMGLPLEPYEWYLDLQRFGTVKQYRVWLKALNGRFLFATCIEHFRDAI 576
            +MGL  E Y WY DL+++GTV      L       ++ T +++ R+ I
Sbjct:  410 EMGLNPEDYWWYRDLRKYGTVPHSGFGL-GFERLIVYVTGLQNIREVI 456
[Close]
BLAST of EY692042 vs. ExPASy Swiss-Prot
Match: SYN_ENT38 (Asparaginyl-tRNA synthetase OS=Enterobacter sp. (strain 638) GN=asnS PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.472e-34
Identity = 70/130 (53.85%), Postives = 85/130 (65.38%), Query Frame = 3 
Query:   51 MEFMANTPYKSCINRLRMVASPPFERISYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKTRIKGHG 440
            M+F A       + RL    S  F ++ YT          K G+ FEN V WG+DL+SEHERYL E  F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+  R++  G
Sbjct:  285 MKFFAERVDSDAVARLERFVSADFAQVDYTDAVAILE---KCGEKFENPVYWGVDLSSEHERYLAEKHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARMEEMG 411

HSP 2 Score: 31.9574 bits (71), Expect = 4.472e-34
Identity = 17/48 (35.42%), Postives = 24/48 (50.00%), Query Frame = 1 
Query:  433 DMGLPLEPYEWYLDLQRFGTVKQYRVWLKALNGRFLFATCIEHFRDAI 576
            +MGL    Y WY DL+R+GTV      L        + T +++ RD I
Sbjct:  409 EMGLNPADYSWYRDLRRYGTVPHSGFGL-GFERLIAYVTGVQNVRDVI 455
[Close]
BLAST of EY692042 vs. ExPASy Swiss-Prot
Match: SYN_SHEHH (Asparaginyl-tRNA synthetase OS=Shewanella halifaxensis (strain HAW-EB4) GN=asnS PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 5.824e-34
Identity = 72/126 (57.14%), Postives = 83/126 (65.87%), Query Frame = 3 
Query:   51 MEFMANTPYKSCINRLRMVASPPFERISYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKTRI 428
            +EF A    K+ I RL    S  F +I YT          K+   FE  VEWGIDL SEHERYL E  F+ PV+V NYPK IKAFYMRLNDD KTVAAMDVL P +GE+IGG+QREER DV+  R+
Sbjct:  285 LEFFAQRVEKTAIERLEAFVSSDFAQIDYTDAIEILKACDKD---FEYDVEWGIDLHSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGAQREERLDVLDARL 407

HSP 2 Score: 29.6462 bits (65), Expect = 5.824e-34
Identity = 17/48 (35.42%), Postives = 23/48 (47.92%), Query Frame = 1 
Query:  433 DMGLPLEPYEWYLDLQRFGTVKQYRVWLKALNGRFLFATCIEHFRDAI 576
            +M L  E Y WY DL+R+GTV      L        + T + + RD I
Sbjct:  409 EMELSQEDYWWYRDLRRYGTVPHAGFGL-GFERLVSYVTGVSNIRDVI 455
[Close]
BLAST of EY692042 vs. ExPASy Swiss-Prot
Match: SYN_SHEON (Asparaginyl-tRNA synthetase OS=Shewanella oneidensis GN=asnS PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 7.586e-34
Identity = 70/127 (55.12%), Postives = 86/127 (67.72%), Query Frame = 3 
Query:   51 MEFMANTPYKSCINRLRMVASPPFERISYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKTRIK 431
            ++F A    K+ I RL+   S  F ++ YT          K G+ FE  V WGIDL+SEHERYL E  F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+  R++
Sbjct:  285 LQFFAQHVDKTVIERLQSFVSSDFAQVDYTDAVEILQ---KSGREFEFPVSWGIDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDMRLE 408

HSP 2 Score: 29.6462 bits (65), Expect = 7.586e-34
Identity = 17/48 (35.42%), Postives = 23/48 (47.92%), Query Frame = 1 
Query:  433 DMGLPLEPYEWYLDLQRFGTVKQYRVWLKALNGRFLFATCIEHFRDAI 576
            +M L  E Y WY DL+R+GTV      L        + T + + RD I
Sbjct:  409 EMDLNKEDYWWYRDLRRYGTVPHAGFGL-GFERLVSYVTGVSNIRDVI 455
[Close]
BLAST of EY692042 vs. ExPASy Swiss-Prot
Match: SYN_SHEAM (Asparaginyl-tRNA synthetase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=asnS PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 7.586e-34
Identity = 72/127 (56.69%), Postives = 85/127 (66.93%), Query Frame = 3 
Query:   51 MEFMANTPYKSCINRLRMVASPPFERISYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKTRIK 431
            M+F A     S I+RL+   S  F ++ YT            GK FE  VEWGIDL SEHERYL E  F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+  R++
Sbjct:  285 MKFFAERVDGSVIDRLQSFVSSDFAQVDYTDAVEILQNC---GKTFEYPVEWGIDLQSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARLE 408

HSP 2 Score: 30.0314 bits (66), Expect = 7.586e-34
Identity = 12/21 (57.14%), Postives = 15/21 (71.43%), Query Frame = 1 
Query:  433 DMGLPLEPYEWYLDLQRFGTV 495
            +M L  E Y WY DL+R+GTV
Sbjct:  409 EMNLSKEDYWWYRDLRRYGTV 429
The following BLAST results are available for this feature:
BLAST of EY692042 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 254
Match NameE-valueIdentityDescription
SYN_ECOL63.433e-3453.97Asparaginyl-tRNA synthetase OS=Escherichia coli O6... [more]
SYN_ECOL53.433e-3453.97Asparaginyl-tRNA synthetase OS=Escherichia coli O6... [more]
SYN_ECOHS3.433e-3453.97Asparaginyl-tRNA synthetase OS=Escherichia coli O9... [more]
SYN_ECO573.433e-3453.97Asparaginyl-tRNA synthetase OS=Escherichia coli O1... [more]
SYN_ECO243.433e-3453.97Asparaginyl-tRNA synthetase OS=Escherichia coli O1... [more]
SYN_MANSM4.472e-3458.68Asparaginyl-tRNA synthetase OS=Mannheimia succinic... [more]
SYN_ENT384.472e-3453.85Asparaginyl-tRNA synthetase OS=Enterobacter sp. (s... [more]
SYN_SHEHH5.824e-3457.14Asparaginyl-tRNA synthetase OS=Shewanella halifaxe... [more]
SYN_SHEON7.586e-3455.12Asparaginyl-tRNA synthetase OS=Shewanella oneidens... [more]
SYN_SHEAM7.586e-3456.69Asparaginyl-tRNA synthetase OS=Shewanella amazonen... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-106-A02-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692042 ID=EY692042; Name=EY692042; organism=Citrus sinensis; type=EST; length=1040bp
ACCCCGGCCGGTCCCGGTCCCGGGAATTCCGGGTCGACCCACGCCTCCGC
ATGGAGTTTATGGCTAACACCCCTTATAAAAGTTGCATTAACCGTCTAAG
AATGGTTGCTTCCCCTCCCTTTGAACGCATATCATACACTGAAGCAGTAG
AGCTACTAGAGGTTGCTGTGAAGGAGGGGAAACATTTTGAGAATAAAGTG
GAGTGGGGGATTGATTTGGCATCTGAGCATGAAAGATACTTAACTGAGGT
CAAATTTCAGAAGCCTGTCATTGTGTACAACTATCCAAAAGGAATCAAAG
CATTTTACATGAGGCTCAATGATGACTTGAAGACTGTGGCAGCTATGGAT
GTCCTTGTACCTAAGGTAGGAGAGTTAATTGGTGGGAGCCAAAGGGAAGA
GCGTTATGATGTAATCAAGACCAGAATAAAGGGACATGGGACTCCCTCTT
GAACCATACGAGTGGTACCTTGACCTGCAGCGCTTTGGGACAGTGAAACA
ATATCGTGTTTGGCTTAAGGCTTTGAACGGAAGATTTCTTTTTGCCACAT
GCATCGAACACTTTAGAGATGCTATCCCCTTTCCCCCAGAATCCCCGGAA
GAACCATATCCTCTAATCCTTGAATTTGCCAAATTGCACTTTATGAAAAA
ACCCCTGATTTTATACATCTTTTGGCTGATTCCCAGCATTGCTAGACCCC
CGACAAACCATAACTCACTGAACTTCCTTTTATCCCCCTATTCCTATAAG
AAAGAAGATATTTTCCCGGGATATAACCTCCCATGCCGACCTATAACCGG
GCTGCATTAATTTACTTATTTTAATCAAGATAAATCTTATAACTAATCAT
TTTTGATTGTGCATTACTACATGTGTGCTTCGGGACGGAATATCCACGAA
TTTTATTAAAAGATTTAAAATATAATAGACAAAAGATAATAGTGTCTAAA
AATCTTTTAGGAAAAAGGTATACAAAAAATAATACATAATAAACACAACA
AAAAAACAATTAAAAATAAGGGGAGGGAAGATAAAATCTA
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