EY692035

Overview
NameEY692035
Unique NameEY692035
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length962
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692035 vs. ExPASy Swiss-Prot
Match: RSSA_BOMMO (40S ribosomal protein SA OS=Bombyx mori PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.095e-14
Identity = 36/65 (55.38%), Postives = 46/65 (70.77%), Query Frame = 2
Query:   17 NFPGRTARPTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 211
            N P      TDSP+R+VDI IP N K  HSIG ++WLLAR VL++RG +    +WDV+V+LFFYR
Sbjct:  141 NIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVELFFYR 205          
BLAST of EY692035 vs. ExPASy Swiss-Prot
Match: RSSA1_SCHJY (40S ribosomal protein S0-A OS=Schizosaccharomyces japonicus (strain yFS275 / FY16936) GN=rps0a PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.095e-14
Identity = 37/65 (56.92%), Postives = 47/65 (72.31%), Query Frame = 2
Query:   17 NFPGRTARPTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 211
            N P  +   TDSP+ +VD+ IP NNKG  SIG ++WLLAR VL++RGTI     WDVMVD++FYR
Sbjct:  143 NIPVISLCDTDSPLAHVDVAIPTNNKGYKSIGLVWWLLAREVLRLRGTISRTSPWDVMVDMYFYR 207          
BLAST of EY692035 vs. ExPASy Swiss-Prot
Match: RSSA_ASPTN (40S ribosomal protein S0 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=rps0 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.573e-14
Identity = 57/167 (34.13%), Postives = 73/167 (43.71%), Query Frame = 2
Query:   17 NFPGRTARPTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYRXXXXXXXXXXXXXXXI---DYATAEYSMNLTSGEQWPSQIADGGWAGGEVQKPIPVVLYFPEAAPTAIVPLGGDGWDAVPAHPRARVTAHPMVSRCGSWGA 505
            N P      TDSP  +VD+ IP NNKG+HSIG ++WLLAR VL++RGT+     +WDV+VDL+FYR               +   D   A    +  +GE W +Q    G                P  A  A    G   W+A  A   A   A P      SW A
Sbjct:  143 NIPVIALCDTDSPTDFVDVAIPTNNKGRHSIGLVWWLLAREVLRLRGTLASREAEWDVVVDLYFYRDPEAEENKEIAEEAKVPGADEIGAGAVESGFAGENWETQAPGAG---------------VPGTAFAAASAAGATSWEADGADWAASSAAAP----AESWAA 290          
BLAST of EY692035 vs. ExPASy Swiss-Prot
Match: RSSA_MALGO (40S ribosomal protein S0 OS=Malassezia globosa (strain ATCC 96807 / CBS 7966) GN=RPS0 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.666e-14
Identity = 37/66 (56.06%), Postives = 48/66 (72.73%), Query Frame = 2
Query:   17 NFPGRTARPTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI-RPGHKWDVMVDLFFYR 211
            N P      TD+P+R+VDI IP NNKG+HSIG L+WLL R  L++RG + R  + W+VMVD+FFYR
Sbjct:  142 NIPVIALCDTDAPLRHVDIAIPGNNKGRHSIGLLWWLLCREFLRLRGIVPRTPNGWNVMVDMFFYR 207          
BLAST of EY692035 vs. ExPASy Swiss-Prot
Match: RSSA_COPC7 (40S ribosomal protein S0 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=RPS0 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.666e-14
Identity = 37/66 (56.06%), Postives = 49/66 (74.24%), Query Frame = 2
Query:   17 NFPGRTARPTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI-RPGHKWDVMVDLFFYR 211
            N P      TD+P+++VD+ IP NNK +HSIG ++WLLAR VL++RGTI R    W+VMVD+FFYR
Sbjct:  142 NIPVIALCDTDAPLQFVDVAIPTNNKTRHSIGLIWWLLAREVLRLRGTIPRTPDGWNVMVDMFFYR 207          
BLAST of EY692035 vs. ExPASy Swiss-Prot
Match: RSSA_BOTFB (40S ribosomal protein S0 OS=Botryotinia fuckeliana (strain B05.10) GN=rps0 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.666e-14
Identity = 57/167 (34.13%), Postives = 78/167 (46.71%), Query Frame = 2
Query:   17 NFPGRTARPTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYRXXXXXXXXXXXXXXXIDYATAEYSMNLTSGEQWPSQIADGGWAG-GEVQKPIPVVLYFPEAAPTAIVPLGGDGWDAVPAHPRARVTAHPMVSRCGSWGAAG 511
            N P      TDSP  +VD+ IP NNKG+HSIG ++W+LAR VL++RG+I     +WD MVDL+FYR                +   A         ++  +   D G+AG G+ +        F  A+ TA    GG  WDA  A P     A     +   W A+G
Sbjct:  143 NIPVIALCDTDSPTEFVDVAIPTNNKGRHSIGLVWWMLAREVLRLRGSIASREAEWDTMVDLYFYRDPEAE-----------ENKEAIEEAKAPGADEVGAAAVDQGFAGAGDWEVSGATAGAFTAASNTAAA--GGASWDA--AEPSDWAAAPAAAGQ--EWAASG 292          
BLAST of EY692035 vs. ExPASy Swiss-Prot
Match: RSSA_AJEDS (40S ribosomal protein S0 OS=Ajellomyces dermatitidis (strain SLH14081) GN=RPS0 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.666e-14
Identity = 36/66 (54.55%), Postives = 48/66 (72.73%), Query Frame = 2
Query:   17 NFPGRTARPTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYR 211
            N P      TDSP  +VD+ IP NNKG+H+IG ++W+LAR VL++RGTI     +WDV+VDL+FYR
Sbjct:  143 NIPVIALCDTDSPTEFVDVAIPTNNKGRHAIGLIWWMLAREVLRLRGTIASRETEWDVVVDLYFYR 208          
BLAST of EY692035 vs. ExPASy Swiss-Prot
Match: RSSA_AJEDR (40S ribosomal protein S0 OS=Ajellomyces dermatitidis (strain ER-3) GN=RPS0 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.666e-14
Identity = 36/66 (54.55%), Postives = 48/66 (72.73%), Query Frame = 2
Query:   17 NFPGRTARPTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYR 211
            N P      TDSP  +VD+ IP NNKG+H+IG ++W+LAR VL++RGTI     +WDV+VDL+FYR
Sbjct:  143 NIPVIALCDTDSPTEFVDVAIPTNNKGRHAIGLIWWMLAREVLRLRGTIASRETEWDVVVDLYFYR 208          
BLAST of EY692035 vs. ExPASy Swiss-Prot
Match: RSSA_TALSN (40S ribosomal protein S0 OS=Talaromyces stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 / NRRL 1006) GN=rps0 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.094e-14
Identity = 36/66 (54.55%), Postives = 48/66 (72.73%), Query Frame = 2
Query:   17 NFPGRTARPTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYR 211
            N P      TDSP  +VD+ IP NNKG+H+IG ++WLLAR VL++RGT+     +WDV+VDL+FYR
Sbjct:  143 NIPVIALCDTDSPTEFVDVAIPTNNKGRHAIGLVWWLLAREVLRLRGTLATRETEWDVVVDLYFYR 208          
BLAST of EY692035 vs. ExPASy Swiss-Prot
Match: RSSA_SCLS1 (40S ribosomal protein S0 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=rps0 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.094e-14
Identity = 56/167 (33.53%), Postives = 77/167 (46.11%), Query Frame = 2
Query:   17 NFPGRTARPTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYRXXXXXXXXXXXXXXXIDYATAEYSMNLTSGEQWPSQIADGGWAG-GEVQKPIPVVLYFPEAAPTAIVPLGGDGWDAVPAHPRARVTAHPMVSRCGSWGAAG 511
            N P      TDSP  +VD+ IP NNKG+HSIG ++W+LAR VL++RG+I     +WD MVDL+FYR                +   A         ++  +   D G+AG G+ +        F  A+ TA    GG  WDA      A   A    +    W A+G
Sbjct:  143 NIPVIALCDTDSPTEFVDVAIPTNNKGRHSIGLVWWMLAREVLRLRGSIASREAEWDTMVDLYFYRDPEAE-----------ENKDAIEEAKAPGADEVGAAAVDQGFAGTGDWEVSGATAGAFTAASNTAAA--GGASWDAAEPSDWAATPA----AAGQEWAASG 292          
The following BLAST results are available for this feature:
BLAST of EY692035 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 135
Match NameE-valueIdentityDescription
RSSA_BOMMO2.095e-1455.3840S ribosomal protein SA OS=Bombyx mori PE=2 SV=1[more]
RSSA1_SCHJY2.095e-1456.9240S ribosomal protein S0-A OS=Schizosaccharomyces ... [more]
RSSA_ASPTN3.573e-1434.1340S ribosomal protein S0 OS=Aspergillus terreus (s... [more]
RSSA_MALGO4.666e-1456.0640S ribosomal protein S0 OS=Malassezia globosa (st... [more]
RSSA_COPC74.666e-1456.0640S ribosomal protein S0 OS=Coprinopsis cinerea (s... [more]
RSSA_BOTFB4.666e-1434.1340S ribosomal protein S0 OS=Botryotinia fuckeliana... [more]
RSSA_AJEDS4.666e-1454.5540S ribosomal protein S0 OS=Ajellomyces dermatitid... [more]
RSSA_AJEDR4.666e-1454.5540S ribosomal protein S0 OS=Ajellomyces dermatitid... [more]
RSSA_TALSN6.094e-1454.5540S ribosomal protein S0 OS=Talaromyces stipitatus... [more]
RSSA_SCLS16.094e-1433.5340S ribosomal protein S0 OS=Sclerotinia sclerotior... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-086-H01-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692035 ID=EY692035; Name=EY692035; organism=Citrus sinensis; type=EST; length=962bp
TGGCAGTCAGGGTCGGAATTTCCCGGGTCGGACCGCGCGTCCGACTGACT
CACCTATGCGTTATGTTGATATTGGCATTCCTGCCAATAACAAGGGCAAA
CACAGCATTGGGTGTCTCTTCTGGCTTTTGGCTAGAATGGTTCTCCAGAT
GCGCGGCACTATTCGTCCTGGCCACAAGTGGGATGTGATGGTCGATCTGT
TCTTCTACAGGGAGCCAGAAGAAACCAAGCAGGCTGAAGAAGAAGAAACT
GCTGCTATTGATTATGCTACAGCAGAGTACAGCATGAATCTTACCAGTGG
TGAGCAATGGCCTTCCCAAATTGCTGATGGTGGGTGGGCGGGTGGTGAAG
TTCAGAAGCCCATTCCTGTTGTTCTCTATTTCCCAGAAGCAGCACCAACA
GCTATAGTTCCTTTGGGTGGGGATGGATGGGATGCAGTGCCGGCACACCC
ACGGGCAAGAGTTACTGCACACCCCATGGTCAGCAGGTGCGGCTCGTGGG
GTGCCGCTGGACCCATGCGTAGTGGCGAGTGAATAGATTAGAGTGAGAGG
GTTATGCCGCTTCCTAAGCATCCACTTCTGACACATAAATGTTTTGATTT
ATAACTTCTTTTTGTCACCGCTGAGGAAATGGGCCGTTACCCAGTAGGGT
AAGATATGACATAAACGAAGACGCAAGAAAACACGACTATATATGTACAA
ACCTGTCCAAACTAAACAACAACTACGGTAAACCCGTATACCGTACCCTA
AAACTTCTATAGTCCACTATTTATAAAATAAAATACCATGAAGTTTACGA
AAGAGGGAATATGGAATCTACCTGTACCGACGCACCACATGGGCATTGGC
AAAACCACTATGTCAGTCACAAAACAAAACGTACGACAATACCTACTGCG
CGCGCGAAGCCAAACCTAGAAAAAACACTTCAAAGAATACACATCACCCC
CAATGAAATAAA
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