EY692017

Overview
NameEY692017
Unique NameEY692017
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1059
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692017 vs. ExPASy Swiss-Prot
Match: NIP21_ORYSJ (Aquaporin NIP2-1 OS=Oryza sativa subsp. japonica GN=NIP2-1 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.838e-12
Identity = 35/100 (35.00%), Postives = 57/100 (57.00%), Query Frame = 2
Query:   95 WNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWLGPFIGAAIAAIVYDHIFIDD 394
            W+++V E+++TF +++   A A D +   +G +A +A+G  V    +  GA  G SMNPA + GPA+ S  +   W+Y+LGP +G    A  Y  I  +D
Sbjct:  164 WHSLVVEVIVTFNMMFVTLAVATDTRA--VGELAGLAVGSAVCITSIFAGAISGGSMNPARTLGPALASNKFDGLWIYFLGPVMGTLSGAWTYTFIRFED 261          
BLAST of EY692017 vs. ExPASy Swiss-Prot
Match: NIP31_MAIZE (Aquaporin NIP3-1 OS=Zea mays GN=NIP3-1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 5.013e-12
Identity = 41/109 (37.61%), Postives = 59/109 (54.13%), Query Frame = 2
Query:   86 VSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWLGPFIGAAIAAIVYDHIFI-DDNAHQP 409
            VS+  A   E +++F L++ V A A D +   +G +A IA+G  V  NIL  G   G SMNP  + GPAV +  +   W+Y L P +GA   A VY  + + D+N   P
Sbjct:  188 VSTAQAFFTEFIISFNLLFVVTAVATDTRA--VGELAGIAVGAAVTLNILVAGPTTGGSMNPVRTLGPAVAAGNYRQLWIYLLAPTLGALAGASVYKAVKLRDENGETP 294          
BLAST of EY692017 vs. ExPASy Swiss-Prot
Match: PIP27_ORYSJ (Probable aquaporin PIP2-7 OS=Oryza sativa subsp. japonica GN=PIP2-7 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 6.547e-12
Identity = 45/107 (42.06%), Postives = 61/107 (57.01%), Query Frame = 2
Query:   65 AFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKK----GNLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVV---SWTWTNHWVYWLGPFIGAAIAA 364
            A  +S G S+  A+  EIV TF LVYTV++ A DPK+      +  + P+ IGF V    LA     G  +NPA S G AV+      W +HW++W+GP IGA +AA
Sbjct:  160 ANTVSDGYSAAGALGAEIVGTFILVYTVFS-ATDPKRTARDSFIPVLVPLPIGFAVFVVHLATIPITGTGINPARSLGAAVLYNQHAAWKDHWIFWVGPVIGAFLAA 265          
BLAST of EY692017 vs. ExPASy Swiss-Prot
Match: NIP11_ORYSJ (Aquaporin NIP1-1 OS=Oryza sativa subsp. japonica GN=NIP1-1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.905e-11
Identity = 36/98 (36.73%), Postives = 56/98 (57.14%), Query Frame = 2
Query:   89 SSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWLGPFIGAAIAAIVYDHI 382
            S   ++V E ++TF L++ +   A D +   +G +A +A+G  +  N+L  G   GASMNPA S GPA++   + + WVY +GP  GA   A  Y+ I
Sbjct:  162 SDVQSLVLEFIITFYLMFVISGVATDNRA--IGELAGLAVGATILLNVLIAGPISGASMNPARSLGPAMIGGEYRSIWVYIVGPVAGAVAGAWAYNII 257          
BLAST of EY692017 vs. ExPASy Swiss-Prot
Match: BIB_DROME (Neurogenic protein big brain OS=Drosophila melanogaster GN=bib PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 5.542e-11
Identity = 38/112 (33.93%), Postives = 58/112 (51.79%), Query Frame = 2
Query:   62 SAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWLGPFIGAAIAAIVYDHIFIDDN 397
            +A + S+ +++W     E ++TF LV   Y  + DP K  +G  A  +IG    A       +    +NPA S GP+ V   W +HWVYW GP +G   + +VY++IF   N
Sbjct:  176 AAISHSAALAAWERFGVEFILTF-LVVLCYFVSTDPMKKFMGNSAA-SIGCAYSACCFVSMPY----LNPARSLGPSFVLNKWDSHWVYWFGPLVGGMASGLVYEYIFNSRN 281          
BLAST of EY692017 vs. ExPASy Swiss-Prot
Match: NIP12_ARATH (Aquaporin NIP1-2 OS=Arabidopsis thaliana GN=NIP1-2 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 9.454e-11
Identity = 38/107 (35.51%), Postives = 59/107 (55.14%), Query Frame = 2
Query:   74 LSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWLGPFIGAAIAAIVYDHIFIDD 394
            L SG S+  + V E ++TF L++ +   A D +   +G +A +A+G  V  N++  G   GASMNP  S GPA+V   +   W+Y + P +GA   A VY+ +   D
Sbjct:  169 LPSG-SNLQSFVIEFIITFYLMFVISGVATDNRA--IGELAGLAVGSTVLLNVIIAGPVSGASMNPGRSLGPAMVYSCYRGLWIYIVSPIVGAVSGAWVYNMVRYTD 272          
The following BLAST results are available for this feature:
BLAST of EY692017 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
NIP21_ORYSJ3.838e-1235.00Aquaporin NIP2-1 OS=Oryza sativa subsp. japonica G... [more]
NIP31_MAIZE5.013e-1237.61Aquaporin NIP3-1 OS=Zea mays GN=NIP3-1 PE=2 SV=1[more]
PIP27_ORYSJ6.547e-1242.06Probable aquaporin PIP2-7 OS=Oryza sativa subsp. j... [more]
NIP11_ORYSJ1.905e-1136.73Aquaporin NIP1-1 OS=Oryza sativa subsp. japonica G... [more]
BIB_DROME5.542e-1133.93Neurogenic protein big brain OS=Drosophila melanog... [more]
NIP12_ARATH9.454e-1135.51Aquaporin NIP1-2 OS=Arabidopsis thaliana GN=NIP1-2... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-086-E12-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692017 ID=EY692017; Name=EY692017; organism=Citrus sinensis; type=EST; length=1059bp
CCGGGGAAATTTCCCGGGGTCGACCCCACGCGTCCGGTTTTCCACCGGTG
GATTGGAAACATCGGCATTCGCACTATCATCTGGCGTCTCATCATGGAAT
GCAGTTGTGTTTGAGATTGTGATGACCTTTGGCTTGGTCTACACAGTGTA
TGCAACAGCAGTGGATCCAAAGAAGGGAAATCTGGGCACTATTGCACCAA
TTGCAATCGGTTTCATTGTTGGTGCCAACATTTTGGCTGGTGGCGCTTTT
GATGGTGCATCAATGAACCCAGCAGTCTCTTTTGGTCCTGCTGTGGTTAG
CTGGACTTGGACTAACCACTGGGTCTACTGGCTTGGACCATTTATTGGTG
CCGCGATTGCGGCCATTGTTTACGACCACATCTTCATCGATGACAACGCT
CACCAACCACTTCCTGCCAATGAAATTCTAACAATCTAATTAATCATAGA
GCTATTGTCACTCTTATCGTTTTAAATCATGAAAAGAATTGAAGCTAGAG
TATTCTTCTGACTTTAATTGGTTGATGATGATAATATAAATAAAAATAAA
AAAGAGAGGAAGAGAATAAAAAAAAATAAAAACAATGGAAACAAAATCAA
TAAGAACACAGTGTGAAAGCCTCAGCACTAAGTTACGAAACAGTTGATAT
AAGGGAGAGACAGTGTTGCAGTTCACTGGCCCTTAACTTACAACACGTAC
AACAATGTACACATCAGAAGTATCGTGTAATGAACTCATCTAAATCAGAA
CCAACGACCAAGAGCAGTCATAAGAAATAACACGAAAGTATCATAACAAA
AACACTAAAAACAGAAACGTACACATGATCAGAAGTGTAAATATTTGTGA
ACAATCAATTATACAGCATACCAGTTGGAGAATGAATACAAAAAAAAAAA
AAAAAAAAAAAACAAAACTAGAAAAACAAGACAAAAACGAGTTCAAAAAC
AACCAATGACAAAACACTGAAGACCTTGCCCTATGCAGACATCAACCTGC
TCCAAAGCAAACAAGACACAACGACAAAATACATACTTAGAACCACAATG
CAACCACAC
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