EY692017

Overview
NameEY692017
Unique NameEY692017
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1059
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692017 vs. ExPASy Swiss-Prot
Match: TIP42_MAIZE (Aquaporin TIP4-2 OS=Zea mays GN=TIP4-2 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 7.439e-32
Identity = 60/127 (47.24%), Postives = 87/127 (68.50%), Query Frame = 2
Query:   32 VRFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWLGPFIGAAIAAIVYDHIFIDDNAHQPL 412
            +R+ +GG+ T   AL +G+     +V E+++TF L++  YA  +DP+   + TI P+  G IVGAN LAGG F GASMNPA SFGPA+ +  WTNHWVYW+GP +G ++A  VY+ +F+ +  H+PL
Sbjct:  127 LRYLSGGMVTPVHALGAGIRPMQGLVMEVILTFSLLFVTYAMILDPRS-QVRTIGPLLTGLIVGANSLAGGNFTGASMNPARSFGPAMATGVWTNHWVYWIGPLLGGSLAGFVYESLFMVNKTHEPL 252          
BLAST of EY692017 vs. ExPASy Swiss-Prot
Match: TIP41_MAIZE (Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.657e-31
Identity = 61/127 (48.03%), Postives = 84/127 (66.14%), Query Frame = 2
Query:   32 VRFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWLGPFIGAAIAAIVYDHIFIDDNAHQPL 412
            +RF +GG+ T   AL  G+S    +V E+++TF L++  YA  +DP+   +  I P+  G IVGAN LAGG F GASMNPA SFGPA+ +  WTNHWVYW+GP +G  +A  VY+ +F+    H+PL
Sbjct:  125 LRFLSGGMVTPVHALGRGISPMQGLVMEVILTFSLLFVTYAMILDPRS-QVRAIGPLLTGLIVGANSLAGGNFTGASMNPARSFGPALATGDWTNHWVYWIGPLLGGPLAGFVYESLFLVQKMHEPL 250          
BLAST of EY692017 vs. ExPASy Swiss-Prot
Match: TIP43_ORYSJ (Probable aquaporin TIP4-3 OS=Oryza sativa subsp. japonica GN=TIP4-3 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.074e-30
Identity = 62/127 (48.82%), Postives = 86/127 (67.72%), Query Frame = 2
Query:   44 TGGLET-SAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWLGPFIGAAIAAIVYDHIFIDDNAHQPLPAN 421
            TGG E     A + GV +  AV  E V+TF L++ VYAT VD ++  +G + P+ +G +VGANILAGG + GASMNPA SFGPA+ +  W +HW+YW+GP IG  +A +VY+ +F+    H+PLP N
Sbjct:  122 TGGEEAVPVHAPAPGVGAARAVAMEAVLTFSLLFAVYATVVDRRRA-VGALGPLLVGLVVGANILAGGPYSGASMNPARSFGPALAAGEWADHWIYWVGPLIGGPLAGLVYEGLFMGPPGHEPLPRN 247          
BLAST of EY692017 vs. ExPASy Swiss-Prot
Match: TIP43_MAIZE (Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 4.990e-28
Identity = 61/119 (51.26%), Postives = 78/119 (65.55%), Query Frame = 2
Query:   32 VRFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWLGPFIGAAIAAIVYDHIFI 388
            +R+ TGGL T   AL+ GV     VV E V TF L++ +YAT +DP+K   G   P+  G +VGAN +AG A  GASMNPA SFGPAV S  WT+HWVYW+GP  G  +A +VY+  F+
Sbjct:  118 LRWLTGGLATPVHALAEGVGPLQGVVAEAVFTFSLLFVIYATILDPRKLLPGA-GPLLTGLLVGANSVAGAALSGASMNPARSFGPAVASGVWTHHWVYWVGPLAGGPLAVLVYECCFM 235          
BLAST of EY692017 vs. ExPASy Swiss-Prot
Match: TIP42_ORYSJ (Probable aquaporin TIP4-2 OS=Oryza sativa subsp. japonica GN=TIP4-2 PE=2 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 2.476e-27
Identity = 60/132 (45.45%), Postives = 79/132 (59.85%), Query Frame = 2
Query:   32 VRFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWLGPFIGAAIAAIVYDHIFID----DNAHQPLP 415
            +R  TGG  T   AL+ GV     V  E V TF L+  + AT +DP++       P+  G +VGAN +AGGA  GASMNPA SFGPA+ +  W +HWVYW+GP  G  +A + Y+ +F+D      AHQPLP
Sbjct:  123 LRCLTGGAATPVHALADGVGPVQGVAAEAVFTFTLLLVICATILDPRRAAPPGTGPLLTGLLVGANTVAGGALTGASMNPARSFGPALATGEWAHHWVYWVGPLAGGPLAVVAYELLFMDVEDAGGAHQPLP 254          
BLAST of EY692017 vs. ExPASy Swiss-Prot
Match: TIP51_ARATH (Probable aquaporin TIP5-1 OS=Arabidopsis thaliana GN=TIP5-1 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.555e-21
Identity = 50/107 (46.73%), Postives = 73/107 (68.22%), Query Frame = 2
Query:   68 FALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWLGPFIGAAIAAIVYDHIFI 388
            + ++  ++ + A V E V+ F LVYTV+ TA DP++G    + PI IGF+ GAN+LA G F G SMNPA +FG A+V  ++ N  VYW+GP +G A AA+VYD++ +
Sbjct:  135 YKIAGEMTGFGASVLEGVLAFVLVYTVF-TASDPRRGLPLAVGPIFIGFVAGANVLAAGPFSGGSMNPACAFGSAMVYGSFKNQAVYWVGPLLGGATAALVYDNVVV 240          
BLAST of EY692017 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 8.531e-20
Identity = 47/116 (40.52%), Postives = 74/116 (63.79%), Query Frame = 2
Query:   47 GGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWLGPFIGAAIAAIVYDHIFIDD 394
            GGL  +   +   +++ + ++ E+++TF LV+T++A+    +    G+IA +AIGF V    L    + GASMNPA SFGPAV+   W NHW+YW+GP IGA +A  +Y+++F  D
Sbjct:  146 GGLGVTT--VHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCPD 258          
BLAST of EY692017 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.114e-19
Identity = 46/116 (39.66%), Postives = 74/116 (63.79%), Query Frame = 2
Query:   47 GGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWLGPFIGAAIAAIVYDHIFIDD 394
            GGL  +   +   +++ + ++ E+++TF LV+T++A+    +    G++A +AIGF V    L    + GASMNPA SFGPAV+   W NHW+YW+GP IGA +A  +Y+++F  D
Sbjct:  143 GGLGVTT--VHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSVA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCPD 255          
BLAST of EY692017 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.455e-19
Identity = 46/116 (39.66%), Postives = 74/116 (63.79%), Query Frame = 2
Query:   47 GGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWLGPFIGAAIAAIVYDHIFIDD 394
            GGL  +   +   +++ + ++ E+++TF LV+T++A+    +    G+IA +AIGF V    L    + GASMNPA SFGPAV+   W NHW+YW+GP +GA +A  +Y+++F  D
Sbjct:  143 GGLGVTT--VHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWANHWIYWVGPIMGAVLAGALYEYVFCPD 255          
BLAST of EY692017 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.900e-19
Identity = 47/116 (40.52%), Postives = 74/116 (63.79%), Query Frame = 2
Query:   47 GGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWLGPFIGAAIAAIVYDHIFIDD 394
            GGL  +   +   +++ + ++ E+++TF LV+T++A+    +    G+IA +AIGF V    L    + GASMNPA SFGPAV+   W NHW+YW+GP IGA +A  +Y+++F  D
Sbjct:  143 GGLGVTT--VHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGGLYEYVFCPD 255          
The following BLAST results are available for this feature:
BLAST of EY692017 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
TIP42_MAIZE7.439e-3247.24Aquaporin TIP4-2 OS=Zea mays GN=TIP4-2 PE=2 SV=1[more]
TIP41_MAIZE1.657e-3148.03Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1[more]
TIP43_ORYSJ1.074e-3048.82Probable aquaporin TIP4-3 OS=Oryza sativa subsp. j... [more]
TIP43_MAIZE4.990e-2851.26Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1[more]
TIP42_ORYSJ2.476e-2745.45Probable aquaporin TIP4-2 OS=Oryza sativa subsp. j... [more]
TIP51_ARATH1.555e-2146.73Probable aquaporin TIP5-1 OS=Arabidopsis thaliana ... [more]
AQP4_NOTAL8.531e-2040.52Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1[more]
AQP4_RAT1.114e-1939.66Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1[more]
AQP4_MOUSE1.455e-1939.66Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2[more]
AQP4_DIPME1.900e-1940.52Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-086-E12-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692017 ID=EY692017; Name=EY692017; organism=Citrus sinensis; type=EST; length=1059bp
CCGGGGAAATTTCCCGGGGTCGACCCCACGCGTCCGGTTTTCCACCGGTG
GATTGGAAACATCGGCATTCGCACTATCATCTGGCGTCTCATCATGGAAT
GCAGTTGTGTTTGAGATTGTGATGACCTTTGGCTTGGTCTACACAGTGTA
TGCAACAGCAGTGGATCCAAAGAAGGGAAATCTGGGCACTATTGCACCAA
TTGCAATCGGTTTCATTGTTGGTGCCAACATTTTGGCTGGTGGCGCTTTT
GATGGTGCATCAATGAACCCAGCAGTCTCTTTTGGTCCTGCTGTGGTTAG
CTGGACTTGGACTAACCACTGGGTCTACTGGCTTGGACCATTTATTGGTG
CCGCGATTGCGGCCATTGTTTACGACCACATCTTCATCGATGACAACGCT
CACCAACCACTTCCTGCCAATGAAATTCTAACAATCTAATTAATCATAGA
GCTATTGTCACTCTTATCGTTTTAAATCATGAAAAGAATTGAAGCTAGAG
TATTCTTCTGACTTTAATTGGTTGATGATGATAATATAAATAAAAATAAA
AAAGAGAGGAAGAGAATAAAAAAAAATAAAAACAATGGAAACAAAATCAA
TAAGAACACAGTGTGAAAGCCTCAGCACTAAGTTACGAAACAGTTGATAT
AAGGGAGAGACAGTGTTGCAGTTCACTGGCCCTTAACTTACAACACGTAC
AACAATGTACACATCAGAAGTATCGTGTAATGAACTCATCTAAATCAGAA
CCAACGACCAAGAGCAGTCATAAGAAATAACACGAAAGTATCATAACAAA
AACACTAAAAACAGAAACGTACACATGATCAGAAGTGTAAATATTTGTGA
ACAATCAATTATACAGCATACCAGTTGGAGAATGAATACAAAAAAAAAAA
AAAAAAAAAAAACAAAACTAGAAAAACAAGACAAAAACGAGTTCAAAAAC
AACCAATGACAAAACACTGAAGACCTTGCCCTATGCAGACATCAACCTGC
TCCAAAGCAAACAAGACACAACGACAAAATACATACTTAGAACCACAATG
CAACCACAC
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