EY692002

Overview
NameEY692002
Unique NameEY692002
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1040
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY692002 vs. ExPASy Swiss-Prot
Match: UB2D2_XENLA (Ubiquitin-conjugating enzyme E2 D2 OS=Xenopus laevis GN=ube2d2 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.789e-22
Identity = 49/97 (50.52%), Postives = 63/97 (64.95%), Query Frame = 2 
Query:  155 MASKRILKELKDLQKDPPTSCSAGPAAEDMFHWQATVMGPSDNPYADMQVYXXXXXXXXXXXXXXXQRLLLGPKVFHPNIDSNGSICLDILKEQWNP 445
            MA KRI KEL DL +DPP  CSAGP  +DMFHWQAT+MGP+D+PY     +                ++    +++HPNI+SNGSICLDIL+ QW+P
Sbjct:    1 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFF--LTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSP 95
[Close]
BLAST of EY692002 vs. ExPASy Swiss-Prot
Match: UB2D2_RAT (Ubiquitin-conjugating enzyme E2 D2 OS=Rattus norvegicus GN=Ube2d2 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.789e-22
Identity = 49/97 (50.52%), Postives = 63/97 (64.95%), Query Frame = 2 
Query:  155 MASKRILKELKDLQKDPPTSCSAGPAAEDMFHWQATVMGPSDNPYADMQVYXXXXXXXXXXXXXXXQRLLLGPKVFHPNIDSNGSICLDILKEQWNP 445
            MA KRI KEL DL +DPP  CSAGP  +DMFHWQAT+MGP+D+PY     +                ++    +++HPNI+SNGSICLDIL+ QW+P
Sbjct:    1 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFF--LTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSP 95
[Close]
BLAST of EY692002 vs. ExPASy Swiss-Prot
Match: UB2D2_PIG (Ubiquitin-conjugating enzyme E2 D2 OS=Sus scrofa GN=UBE2D2 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.789e-22
Identity = 49/97 (50.52%), Postives = 63/97 (64.95%), Query Frame = 2 
Query:  155 MASKRILKELKDLQKDPPTSCSAGPAAEDMFHWQATVMGPSDNPYADMQVYXXXXXXXXXXXXXXXQRLLLGPKVFHPNIDSNGSICLDILKEQWNP 445
            MA KRI KEL DL +DPP  CSAGP  +DMFHWQAT+MGP+D+PY     +                ++    +++HPNI+SNGSICLDIL+ QW+P
Sbjct:    1 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFF--LTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSP 95
[Close]
BLAST of EY692002 vs. ExPASy Swiss-Prot
Match: UB2D2_MOUSE (Ubiquitin-conjugating enzyme E2 D2 OS=Mus musculus GN=Ube2d2 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.789e-22
Identity = 49/97 (50.52%), Postives = 63/97 (64.95%), Query Frame = 2 
Query:  155 MASKRILKELKDLQKDPPTSCSAGPAAEDMFHWQATVMGPSDNPYADMQVYXXXXXXXXXXXXXXXQRLLLGPKVFHPNIDSNGSICLDILKEQWNP 445
            MA KRI KEL DL +DPP  CSAGP  +DMFHWQAT+MGP+D+PY     +                ++    +++HPNI+SNGSICLDIL+ QW+P
Sbjct:    1 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFF--LTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSP 95
[Close]
BLAST of EY692002 vs. ExPASy Swiss-Prot
Match: UB2D2_HUMAN (Ubiquitin-conjugating enzyme E2 D2 OS=Homo sapiens GN=UBE2D2 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.789e-22
Identity = 49/97 (50.52%), Postives = 63/97 (64.95%), Query Frame = 2 
Query:  155 MASKRILKELKDLQKDPPTSCSAGPAAEDMFHWQATVMGPSDNPYADMQVYXXXXXXXXXXXXXXXQRLLLGPKVFHPNIDSNGSICLDILKEQWNP 445
            MA KRI KEL DL +DPP  CSAGP  +DMFHWQAT+MGP+D+PY     +                ++    +++HPNI+SNGSICLDIL+ QW+P
Sbjct:    1 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFF--LTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSP 95
[Close]
BLAST of EY692002 vs. ExPASy Swiss-Prot
Match: UB2D2_BOVIN (Ubiquitin-conjugating enzyme E2 D2 OS=Bos taurus GN=UBE2D2 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.789e-22
Identity = 49/97 (50.52%), Postives = 63/97 (64.95%), Query Frame = 2 
Query:  155 MASKRILKELKDLQKDPPTSCSAGPAAEDMFHWQATVMGPSDNPYADMQVYXXXXXXXXXXXXXXXQRLLLGPKVFHPNIDSNGSICLDILKEQWNP 445
            MA KRI KEL DL +DPP  CSAGP  +DMFHWQAT+MGP+D+PY     +                ++    +++HPNI+SNGSICLDIL+ QW+P
Sbjct:    1 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFF--LTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSP 95
[Close]
BLAST of EY692002 vs. ExPASy Swiss-Prot
Match: U2D2B_RAT (Ubiquitin-conjugating enzyme E2 D2B OS=Rattus norvegicus GN=Ube2d2b PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.789e-22
Identity = 49/97 (50.52%), Postives = 63/97 (64.95%), Query Frame = 2 
Query:  155 MASKRILKELKDLQKDPPTSCSAGPAAEDMFHWQATVMGPSDNPYADMQVYXXXXXXXXXXXXXXXQRLLLGPKVFHPNIDSNGSICLDILKEQWNP 445
            MA KRI KEL DL +DPP  CSAGP  EDMFHWQAT+MGP+D+PY     +                ++    +++HPN++SNGSICLDIL+ QW+P
Sbjct:    1 MALKRIHKELNDLAQDPPAQCSAGPVGEDMFHWQATIMGPNDSPYQGGAFF--LTIDFPTEYPFKPPKVEFTTRIYHPNVNSNGSICLDILRSQWSP 95
[Close]
BLAST of EY692002 vs. ExPASy Swiss-Prot
Match: U2D2B_MOUSE (Ubiquitin-conjugating enzyme E2 D2B OS=Mus musculus GN=Ube2d2b PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.789e-22
Identity = 49/97 (50.52%), Postives = 63/97 (64.95%), Query Frame = 2 
Query:  155 MASKRILKELKDLQKDPPTSCSAGPAAEDMFHWQATVMGPSDNPYADMQVYXXXXXXXXXXXXXXXQRLLLGPKVFHPNIDSNGSICLDILKEQWNP 445
            MA KRI KEL DL +DPP  CSAGP  EDMFHWQAT+MGP+D+PY     +                ++    +++HPN++SNGSICLDIL+ QW+P
Sbjct:    1 MALKRIHKELNDLAQDPPAQCSAGPVGEDMFHWQATIMGPNDSPYQGGAFF--LTIDFPTEYPFKPPKVEFTTRIYHPNVNSNGSICLDILRSQWSP 95
[Close]
BLAST of EY692002 vs. ExPASy Swiss-Prot
Match: UBC5_YEAST (Ubiquitin-conjugating enzyme E2-16 kDa OS=Saccharomyces cerevisiae GN=UBC5 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.337e-22
Identity = 48/96 (50.00%), Postives = 66/96 (68.75%), Query Frame = 2 
Query:  158 ASKRILKELKDLQKDPPTSCSAGPAAEDMFHWQATVMGPSDNPYADMQVYXXXXXXXXXXXXXXXQRLLLGPKVFHPNIDSNGSICLDILKEQWNP 445
            +SKRI KEL DL +DPP SCSAGP  +D++HWQA++MGPSD+PYA    +                ++    K++HPNI+S+G+ICLDILK+QW+P
Sbjct:    3 SSKRIAKELSDLGRDPPASCSAGPVGDDLYHWQASIMGPSDSPYAGGVFF--LSIHFPTDYPFKPPKVNFTTKIYHPNINSSGNICLDILKDQWSP 96
[Close]
BLAST of EY692002 vs. ExPASy Swiss-Prot
Match: UB2D1_MOUSE (Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus GN=Ube2d1 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.986e-22
Identity = 49/97 (50.52%), Postives = 62/97 (63.92%), Query Frame = 2 
Query:  155 MASKRILKELKDLQKDPPTSCSAGPAAEDMFHWQATVMGPSDNPYADMQVYXXXXXXXXXXXXXXXQRLLLGPKVFHPNIDSNGSICLDILKEQWNP 445
            MA KRI KEL DLQ+DPP  CSAGP  +D+FHWQAT+MGP D+ Y     +                ++    K++HPNI+SNGSICLDIL+ QW+P
Sbjct:    1 MALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFF--LTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSP 95
The following BLAST results are available for this feature:
BLAST of EY692002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
UB2D2_XENLA1.789e-2250.52Ubiquitin-conjugating enzyme E2 D2 OS=Xenopus laev... [more]
UB2D2_RAT1.789e-2250.52Ubiquitin-conjugating enzyme E2 D2 OS=Rattus norve... [more]
UB2D2_PIG1.789e-2250.52Ubiquitin-conjugating enzyme E2 D2 OS=Sus scrofa G... [more]
UB2D2_MOUSE1.789e-2250.52Ubiquitin-conjugating enzyme E2 D2 OS=Mus musculus... [more]
UB2D2_HUMAN1.789e-2250.52Ubiquitin-conjugating enzyme E2 D2 OS=Homo sapiens... [more]
UB2D2_BOVIN1.789e-2250.52Ubiquitin-conjugating enzyme E2 D2 OS=Bos taurus G... [more]
U2D2B_RAT1.789e-2250.52Ubiquitin-conjugating enzyme E2 D2B OS=Rattus norv... [more]
U2D2B_MOUSE1.789e-2250.52Ubiquitin-conjugating enzyme E2 D2B OS=Mus musculu... [more]
UBC5_YEAST2.337e-2250.00Ubiquitin-conjugating enzyme E2-16 kDa OS=Saccharo... [more]
UB2D1_MOUSE3.986e-2250.52Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-086-D03-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692002 ID=EY692002; Name=EY692002; organism=Citrus sinensis; type=EST; length=1040bp
GTTCACGAAGGAAGCGAGGCGTGGGGCGGCTTGACGACGTAGATCTGCTT
CACCGTTTCGCTTTCTCGACGCTATTACCCTACGATCCTGTTCTCTGCCG
CGCAAGGTCTTAAGGTTCGTTGTAGCTTTAATTTTAATAACCCCTTGAAG
AGTCATGGCTTCAAAGCGTATTTTGAAGGAACTCAAGGATCTGCAAAAGG
ATCCTCCCACATCTTGCAGCGCTGGCCCTGCGGCTGAAGACATGTTCCAC
TGGCAAGCCACAGTTATGGGCCCTTCTGATAACCCATATGCTGATATGCA
GGTGTATTTTTAGTTGCCATTAATTTTCCTCCTGATTATCCTTTCAAGCC
CCCAAAGGTTGCTTTTAGGACCAAAGGTCTTCCACCCGAACATCGACAGC
AATGGAAGCATCTGTCTTGATATCCTTAAAGAACAGTGGAATCCCTGCGC
TTAACCTTTCAAAGATGGTGAAATTGTAACACGAATGCACGATATAATGC
GGAAGAATGATTGGATGATGAATACATTTAAAGGTGAATATGGGACTTCC
ACACAACCTAACTTCACCCCTGACATTAGATAGAAGCCTTATAAACAAAA
AAGAATAAAAATACTAAAAAAATAGATAAACATTTTCTAAAAAAAAAACA
CTGTAAAAACAGAAAAAATATAAGTAAAGGCACTCGAGAGAAACTCATAC
GGATTATACATCTACACTTATACTCGCCATGACACTCCATGCAGGAGATA
ACAACCAGTCTTGACGCATTAAAATAAAAAATAATTTAATATCATGATTA
CATATAGAGGACATAAATTGCTGTTTAACATTCGAGAAGACCAACCAACA
TAATGTCGATATTAAATATTTATATAAACAAATATAACAAAAAAAAAACA
GTTGATATACGAAGAGTGGCAATAAACGAATAGTCCATAAAACCTTGGAA
ACTAAAATTAATAGTATGACATCGTTCAACACGACGATATAATTTGTATT
TTGTAAGTAATTGCGAATGTTAATACGAATGTTGTGTTAT
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