EY692002

Overview
NameEY692002
Unique NameEY692002
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1040
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692002 vs. ExPASy Swiss-Prot
Match: UB2E3_BOVIN (Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus GN=UBE2E3 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.679e-12
Identity = 33/96 (34.38%), Postives = 56/96 (58.33%), Query Frame = 2
Query:  158 ASKRILKELKDLQKDPPTSCSAGPAAEDMFHWQATVMGPSDNPYADMQVYXXXXXXXXXXXXXXXQRLLLGPKVFHPNIDSNGSICLDILKEQWNP 445
            ++KRI KEL ++  DPP +CSAGP  ++++ W++T++GP  + Y     +                ++    +++H NI+S G ICLDILK+ W+P
Sbjct:   62 SAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFF--LDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSP 155          
BLAST of EY692002 vs. ExPASy Swiss-Prot
Match: UB2E2_MOUSE (Ubiquitin-conjugating enzyme E2 E2 OS=Mus musculus GN=Ube2e2 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.679e-12
Identity = 33/96 (34.38%), Postives = 56/96 (58.33%), Query Frame = 2
Query:  158 ASKRILKELKDLQKDPPTSCSAGPAAEDMFHWQATVMGPSDNPYADMQVYXXXXXXXXXXXXXXXQRLLLGPKVFHPNIDSNGSICLDILKEQWNP 445
            ++KRI KEL ++  DPP +CSAGP  ++++ W++T++GP  + Y     +                ++    +++H NI+S G ICLDILK+ W+P
Sbjct:   56 SAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFF--LDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSP 149          
BLAST of EY692002 vs. ExPASy Swiss-Prot
Match: UB2E2_HUMAN (Ubiquitin-conjugating enzyme E2 E2 OS=Homo sapiens GN=UBE2E2 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.679e-12
Identity = 33/96 (34.38%), Postives = 56/96 (58.33%), Query Frame = 2
Query:  158 ASKRILKELKDLQKDPPTSCSAGPAAEDMFHWQATVMGPSDNPYADMQVYXXXXXXXXXXXXXXXQRLLLGPKVFHPNIDSNGSICLDILKEQWNP 445
            ++KRI KEL ++  DPP +CSAGP  ++++ W++T++GP  + Y     +                ++    +++H NI+S G ICLDILK+ W+P
Sbjct:   56 SAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFF--LDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSP 149          
BLAST of EY692002 vs. ExPASy Swiss-Prot
Match: UBCD6_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=UbcD6 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.863e-12
Identity = 34/96 (35.42%), Postives = 51/96 (53.12%), Query Frame = 2
Query:  158 ASKRILKELKDLQKDPPTSCSAGPAAEDMFHWQATVMGPSDNPYADMQVYXXXXXXXXXXXXXXXQRLLLGPKVFHPNIDSNGSICLDILKEQWNP 445
            A +R++++ K LQ+DPPT  S  P   ++  W A + GP D P+ D                    R +   KVFHPN+ ++G ICLDIL+ +W+P
Sbjct:    5 ARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFV--SKVFHPNVYADGGICLDILQNRWSP 98          
BLAST of EY692002 vs. ExPASy Swiss-Prot
Match: UBCD2_DROME (Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophila melanogaster GN=UbcD2 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.863e-12
Identity = 33/96 (34.38%), Postives = 55/96 (57.29%), Query Frame = 2
Query:  158 ASKRILKELKDLQKDPPTSCSAGPAAEDMFHWQATVMGPSDNPYADMQVYXXXXXXXXXXXXXXXQRLLLGPKVFHPNIDSNGSICLDILKEQWNP 445
            ++KRI KEL ++  DPP +CSAGP  ++++ W +T++GP  + Y     +                ++    +++H NI+S G ICLDILK+ W+P
Sbjct:   87 SAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFF--LDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSP 180          
BLAST of EY692002 vs. ExPASy Swiss-Prot
Match: COP10_ARATH (Constitutive photomorphogenesis protein 10 OS=Arabidopsis thaliana GN=COP10 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.740e-12
Identity = 31/96 (32.29%), Postives = 55/96 (57.29%), Query Frame = 2
Query:  158 ASKRILKELKDLQKDPPTSCSAGPAAEDMFHWQATVMGPSDNPYADMQVYXXXXXXXXXXXXXXXQRLLLGPKVFHPNIDSNGSICLDILKEQWNP 445
            + KRI +E+ +L  DPP  CSAGP  ++++HW AT++GPS  PY     +                +L+   +++H N+D+ G + ++IL++ W+P
Sbjct:   37 SGKRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIFF--LDIIFPSDYPFKPPKLVFKTRIYHCNVDTAGDLSVNILRDSWSP 130          
BLAST of EY692002 vs. ExPASy Swiss-Prot
Match: UBE2B_RAT (Ubiquitin-conjugating enzyme E2 B OS=Rattus norvegicus GN=Ube2b PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.884e-12
Identity = 33/96 (34.38%), Postives = 51/96 (53.12%), Query Frame = 2
Query:  158 ASKRILKELKDLQKDPPTSCSAGPAAEDMFHWQATVMGPSDNPYADMQVYXXXXXXXXXXXXXXXQRLLLGPKVFHPNIDSNGSICLDILKEQWNP 445
            A +R++++ K LQ+DPP   S  P+  ++  W A + GP   P+ D                    R L   K+FHPN+ ++GSICLDIL+ +W+P
Sbjct:    5 ARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFL--SKMFHPNVYADGSICLDILQNRWSP 98          
BLAST of EY692002 vs. ExPASy Swiss-Prot
Match: UBE2B_RABIT (Ubiquitin-conjugating enzyme E2 B OS=Oryctolagus cuniculus GN=UBE2B PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.884e-12
Identity = 33/96 (34.38%), Postives = 51/96 (53.12%), Query Frame = 2
Query:  158 ASKRILKELKDLQKDPPTSCSAGPAAEDMFHWQATVMGPSDNPYADMQVYXXXXXXXXXXXXXXXQRLLLGPKVFHPNIDSNGSICLDILKEQWNP 445
            A +R++++ K LQ+DPP   S  P+  ++  W A + GP   P+ D                    R L   K+FHPN+ ++GSICLDIL+ +W+P
Sbjct:    5 ARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFL--SKMFHPNVYADGSICLDILQNRWSP 98          
BLAST of EY692002 vs. ExPASy Swiss-Prot
Match: UBE2B_MOUSE (Ubiquitin-conjugating enzyme E2 B OS=Mus musculus GN=Ube2b PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.884e-12
Identity = 33/96 (34.38%), Postives = 51/96 (53.12%), Query Frame = 2
Query:  158 ASKRILKELKDLQKDPPTSCSAGPAAEDMFHWQATVMGPSDNPYADMQVYXXXXXXXXXXXXXXXQRLLLGPKVFHPNIDSNGSICLDILKEQWNP 445
            A +R++++ K LQ+DPP   S  P+  ++  W A + GP   P+ D                    R L   K+FHPN+ ++GSICLDIL+ +W+P
Sbjct:    5 ARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFL--SKMFHPNVYADGSICLDILQNRWSP 98          
BLAST of EY692002 vs. ExPASy Swiss-Prot
Match: UBE2B_HUMAN (Ubiquitin-conjugating enzyme E2 B OS=Homo sapiens GN=UBE2B PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.884e-12
Identity = 33/96 (34.38%), Postives = 51/96 (53.12%), Query Frame = 2
Query:  158 ASKRILKELKDLQKDPPTSCSAGPAAEDMFHWQATVMGPSDNPYADMQVYXXXXXXXXXXXXXXXQRLLLGPKVFHPNIDSNGSICLDILKEQWNP 445
            A +R++++ K LQ+DPP   S  P+  ++  W A + GP   P+ D                    R L   K+FHPN+ ++GSICLDIL+ +W+P
Sbjct:    5 ARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFL--SKMFHPNVYADGSICLDILQNRWSP 98          
The following BLAST results are available for this feature:
BLAST of EY692002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
UB2E3_BOVIN1.679e-1234.38Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus G... [more]
UB2E2_MOUSE1.679e-1234.38Ubiquitin-conjugating enzyme E2 E2 OS=Mus musculus... [more]
UB2E2_HUMAN1.679e-1234.38Ubiquitin-conjugating enzyme E2 E2 OS=Homo sapiens... [more]
UBCD6_DROME2.863e-1235.42Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophi... [more]
UBCD2_DROME2.863e-1234.38Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophi... [more]
COP10_ARATH3.740e-1232.29Constitutive photomorphogenesis protein 10 OS=Arab... [more]
UBE2B_RAT4.884e-1234.38Ubiquitin-conjugating enzyme E2 B OS=Rattus norveg... [more]
UBE2B_RABIT4.884e-1234.38Ubiquitin-conjugating enzyme E2 B OS=Oryctolagus c... [more]
UBE2B_MOUSE4.884e-1234.38Ubiquitin-conjugating enzyme E2 B OS=Mus musculus ... [more]
UBE2B_HUMAN4.884e-1234.38Ubiquitin-conjugating enzyme E2 B OS=Homo sapiens ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-086-D03-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692002 ID=EY692002; Name=EY692002; organism=Citrus sinensis; type=EST; length=1040bp
GTTCACGAAGGAAGCGAGGCGTGGGGCGGCTTGACGACGTAGATCTGCTT
CACCGTTTCGCTTTCTCGACGCTATTACCCTACGATCCTGTTCTCTGCCG
CGCAAGGTCTTAAGGTTCGTTGTAGCTTTAATTTTAATAACCCCTTGAAG
AGTCATGGCTTCAAAGCGTATTTTGAAGGAACTCAAGGATCTGCAAAAGG
ATCCTCCCACATCTTGCAGCGCTGGCCCTGCGGCTGAAGACATGTTCCAC
TGGCAAGCCACAGTTATGGGCCCTTCTGATAACCCATATGCTGATATGCA
GGTGTATTTTTAGTTGCCATTAATTTTCCTCCTGATTATCCTTTCAAGCC
CCCAAAGGTTGCTTTTAGGACCAAAGGTCTTCCACCCGAACATCGACAGC
AATGGAAGCATCTGTCTTGATATCCTTAAAGAACAGTGGAATCCCTGCGC
TTAACCTTTCAAAGATGGTGAAATTGTAACACGAATGCACGATATAATGC
GGAAGAATGATTGGATGATGAATACATTTAAAGGTGAATATGGGACTTCC
ACACAACCTAACTTCACCCCTGACATTAGATAGAAGCCTTATAAACAAAA
AAGAATAAAAATACTAAAAAAATAGATAAACATTTTCTAAAAAAAAAACA
CTGTAAAAACAGAAAAAATATAAGTAAAGGCACTCGAGAGAAACTCATAC
GGATTATACATCTACACTTATACTCGCCATGACACTCCATGCAGGAGATA
ACAACCAGTCTTGACGCATTAAAATAAAAAATAATTTAATATCATGATTA
CATATAGAGGACATAAATTGCTGTTTAACATTCGAGAAGACCAACCAACA
TAATGTCGATATTAAATATTTATATAAACAAATATAACAAAAAAAAAACA
GTTGATATACGAAGAGTGGCAATAAACGAATAGTCCATAAAACCTTGGAA
ACTAAAATTAATAGTATGACATCGTTCAACACGACGATATAATTTGTATT
TTGTAAGTAATTGCGAATGTTAATACGAATGTTGTGTTAT
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