EY692002

Overview
NameEY692002
Unique NameEY692002
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1040
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692002 vs. ExPASy Swiss-Prot
Match: UBE2B_BOVIN (Ubiquitin-conjugating enzyme E2 B OS=Bos taurus GN=UBE2B PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.884e-12
Identity = 33/96 (34.38%), Postives = 51/96 (53.12%), Query Frame = 2
Query:  158 ASKRILKELKDLQKDPPTSCSAGPAAEDMFHWQATVMGPSDNPYADMQVYXXXXXXXXXXXXXXXQRLLLGPKVFHPNIDSNGSICLDILKEQWNP 445
            A +R++++ K LQ+DPP   S  P+  ++  W A + GP   P+ D                    R L   K+FHPN+ ++GSICLDIL+ +W+P
Sbjct:    5 ARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFL--SKMFHPNVYADGSICLDILQNRWSP 98          
BLAST of EY692002 vs. ExPASy Swiss-Prot
Match: UBC2_USTMA (Ubiquitin-conjugating enzyme E2 2 OS=Ustilago maydis GN=UBC2 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.884e-12
Identity = 32/96 (33.33%), Postives = 51/96 (53.12%), Query Frame = 2
Query:  158 ASKRILKELKDLQKDPPTSCSAGPAAEDMFHWQATVMGPSDNPYADMQVYXXXXXXXXXXXXXXXQRLLLGPKVFHPNIDSNGSICLDILKEQWNP 445
            + KR++++ K L  DPP   S  P A+++  W A + GP+D P+ D                    + L   K+FHPN+ +NG +CLDIL+ +W+P
Sbjct:    5 SKKRLIRDFKRLSTDPPGGISGAPCADNLMIWNAVIFGPADTPFEDGTFKLVLTFDESYPNKPPTVKFL--SKMFHPNVYANGELCLDILQNRWSP 98          
BLAST of EY692002 vs. ExPASy Swiss-Prot
Match: UBC2_CANAL (Ubiquitin-conjugating enzyme E2 2 OS=Candida albicans GN=UBC2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.379e-12
Identity = 30/96 (31.25%), Postives = 55/96 (57.29%), Query Frame = 2
Query:  158 ASKRILKELKDLQKDPPTSCSAGPAAEDMFHWQATVMGPSDNPYADMQVYXXXXXXXXXXXXXXXQRLLLGPKVFHPNIDSNGSICLDILKEQWNP 445
            A +R++++ K +Q+DPP+  SA P  +++  W A ++GPSD P+ D                    + +   ++FHPN+ ++G +CLDIL+ +W+P
Sbjct:    5 ARRRLMRDFKRMQQDPPSGVSASPLPDNVMKWNAVIIGPSDTPFEDGTFRLLLSFDEQYPNKPPQVKFI--SEMFHPNVYASGELCLDILQNRWSP 98          
BLAST of EY692002 vs. ExPASy Swiss-Prot
Match: UBC2_SCHPO (Ubiquitin-conjugating enzyme E2 2 OS=Schizosaccharomyces pombe GN=rhp6 PE=1 SV=3)

HSP 1 Score: 71.633 bits (174), Expect = 8.331e-12
Identity = 30/96 (31.25%), Postives = 54/96 (56.25%), Query Frame = 2
Query:  158 ASKRILKELKDLQKDPPTSCSAGPAAEDMFHWQATVMGPSDNPYADMQVYXXXXXXXXXXXXXXXQRLLLGPKVFHPNIDSNGSICLDILKEQWNP 445
            A +R++++ K +Q+DPP   SA P ++++  W A ++GP+D P+ D                    + +    +FHPN+ +NG +CLDIL+ +W+P
Sbjct:    5 ARRRLMRDFKRMQQDPPAGVSASPVSDNVMLWNAVIIGPADTPFEDGTFKLVLSFDEQYPNKPPLVKFV--STMFHPNVYANGELCLDILQNRWSP 98          
BLAST of EY692002 vs. ExPASy Swiss-Prot
Match: UBC2_YARLI (Ubiquitin-conjugating enzyme E2 2 OS=Yarrowia lipolytica GN=UBC2 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.088e-11
Identity = 30/96 (31.25%), Postives = 55/96 (57.29%), Query Frame = 2
Query:  158 ASKRILKELKDLQKDPPTSCSAGPAAEDMFHWQATVMGPSDNPYADMQVYXXXXXXXXXXXXXXXQRLLLGPKVFHPNIDSNGSICLDILKEQWNP 445
            A +R++++ K +Q+DPP   SA P A+++  W A ++GP++ P+ D                    + +   ++FHPN+ S+G +CLDIL+ +W+P
Sbjct:    5 ARRRLMRDFKRMQQDPPQGVSASPVADNVLTWNAVIIGPAETPFEDGTFRMVLQFDEQYPNKPPAVKFV--SQMFHPNVYSSGELCLDILQNRWSP 98          
BLAST of EY692002 vs. ExPASy Swiss-Prot
Match: UBC2_TRIHA (Ubiquitin-conjugating enzyme E2 2 OS=Trichoderma harzianum GN=UBC2 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.088e-11
Identity = 30/96 (31.25%), Postives = 53/96 (55.21%), Query Frame = 2
Query:  158 ASKRILKELKDLQKDPPTSCSAGPAAEDMFHWQATVMGPSDNPYADMQVYXXXXXXXXXXXXXXXQRLLLGPKVFHPNIDSNGSICLDILKEQWNP 445
            A +R++++ K +Q DPP   SA P  +++  W A ++GP+D P+ D                    + +   ++FHPN+ +NG +CLDIL+ +W+P
Sbjct:    5 ARRRLMRDFKRMQTDPPAGVSASPIPDNVMTWNAVIIGPADTPFEDGTFRLVMQFEEQYPNKPPQVKFI--SQMFHPNVYANGELCLDILQNRWSP 98          
BLAST of EY692002 vs. ExPASy Swiss-Prot
Match: UBC2_EMENI (Ubiquitin-conjugating enzyme E2 2 OS=Emericella nidulans GN=uvsJ PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.421e-11
Identity = 30/96 (31.25%), Postives = 52/96 (54.17%), Query Frame = 2
Query:  158 ASKRILKELKDLQKDPPTSCSAGPAAEDMFHWQATVMGPSDNPYADMQVYXXXXXXXXXXXXXXXQRLLLGPKVFHPNIDSNGSICLDILKEQWNP 445
            A +R++++ K +Q DPP   SA P A+++  W A ++GP+D P+ D                    + +   ++FHPN+   G +CLDIL+ +W+P
Sbjct:    5 ARRRLMRDFKRMQTDPPAGVSASPVADNVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPGVKFI--SQMFHPNVYGTGELCLDILQNRWSP 98          
BLAST of EY692002 vs. ExPASy Swiss-Prot
Match: UBC2_ASPFU (Ubiquitin-conjugating enzyme E2 2 OS=Aspergillus fumigatus GN=ubc2 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.421e-11
Identity = 30/96 (31.25%), Postives = 52/96 (54.17%), Query Frame = 2
Query:  158 ASKRILKELKDLQKDPPTSCSAGPAAEDMFHWQATVMGPSDNPYADMQVYXXXXXXXXXXXXXXXQRLLLGPKVFHPNIDSNGSICLDILKEQWNP 445
            A +R++++ K +Q DPP   SA P A+++  W A ++GP+D P+ D                    + +   ++FHPN+   G +CLDIL+ +W+P
Sbjct:    5 ARRRLMRDFKRMQTDPPAGVSASPVADNVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPGVKFI--SQMFHPNVYGTGELCLDILQNRWSP 98          
BLAST of EY692002 vs. ExPASy Swiss-Prot
Match: UBC1_CAEEL (Ubiquitin-conjugating enzyme E2 1 OS=Caenorhabditis elegans GN=ubc-1 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.421e-11
Identity = 30/94 (31.91%), Postives = 52/94 (55.32%), Query Frame = 2
Query:  164 KRILKELKDLQKDPPTSCSAGPAAEDMFHWQATVMGPSDNPYADMQVYXXXXXXXXXXXXXXXQRLLLGPKVFHPNIDSNGSICLDILKEQWNP 445
            +R++++ K LQ+DPP   S  P  +++  W+A + GP + P+ D                    + +   K+FHPN+ ++GSICLDIL+ +W+P
Sbjct:    7 RRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFI--SKMFHPNVYADGSICLDILQNRWSP 98          
BLAST of EY692002 vs. ExPASy Swiss-Prot
Match: UBE2A_MOUSE (Ubiquitin-conjugating enzyme E2 A OS=Mus musculus GN=Ube2a PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.424e-11
Identity = 32/96 (33.33%), Postives = 51/96 (53.12%), Query Frame = 2
Query:  158 ASKRILKELKDLQKDPPTSCSAGPAAEDMFHWQATVMGPSDNPYADMQVYXXXXXXXXXXXXXXXQRLLLGPKVFHPNIDSNGSICLDILKEQWNP 445
            A +R++++ K LQ+DPP   S  P+  ++  W A + GP   P+ D                    R +   K+FHPN+ ++GSICLDIL+ +W+P
Sbjct:    5 ARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRFV--SKMFHPNVYADGSICLDILQNRWSP 98          
The following BLAST results are available for this feature:
BLAST of EY692002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
UBE2B_BOVIN4.884e-1234.38Ubiquitin-conjugating enzyme E2 B OS=Bos taurus GN... [more]
UBC2_USTMA4.884e-1233.33Ubiquitin-conjugating enzyme E2 2 OS=Ustilago mayd... [more]
UBC2_CANAL6.379e-1231.25Ubiquitin-conjugating enzyme E2 2 OS=Candida albic... [more]
UBC2_SCHPO8.331e-1231.25Ubiquitin-conjugating enzyme E2 2 OS=Schizosacchar... [more]
UBC2_YARLI1.088e-1131.25Ubiquitin-conjugating enzyme E2 2 OS=Yarrowia lipo... [more]
UBC2_TRIHA1.088e-1131.25Ubiquitin-conjugating enzyme E2 2 OS=Trichoderma h... [more]
UBC2_EMENI1.421e-1131.25Ubiquitin-conjugating enzyme E2 2 OS=Emericella ni... [more]
UBC2_ASPFU1.421e-1131.25Ubiquitin-conjugating enzyme E2 2 OS=Aspergillus f... [more]
UBC1_CAEEL1.421e-1131.91Ubiquitin-conjugating enzyme E2 1 OS=Caenorhabditi... [more]
UBE2A_MOUSE2.424e-1133.33Ubiquitin-conjugating enzyme E2 A OS=Mus musculus ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-086-D03-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692002 ID=EY692002; Name=EY692002; organism=Citrus sinensis; type=EST; length=1040bp
GTTCACGAAGGAAGCGAGGCGTGGGGCGGCTTGACGACGTAGATCTGCTT
CACCGTTTCGCTTTCTCGACGCTATTACCCTACGATCCTGTTCTCTGCCG
CGCAAGGTCTTAAGGTTCGTTGTAGCTTTAATTTTAATAACCCCTTGAAG
AGTCATGGCTTCAAAGCGTATTTTGAAGGAACTCAAGGATCTGCAAAAGG
ATCCTCCCACATCTTGCAGCGCTGGCCCTGCGGCTGAAGACATGTTCCAC
TGGCAAGCCACAGTTATGGGCCCTTCTGATAACCCATATGCTGATATGCA
GGTGTATTTTTAGTTGCCATTAATTTTCCTCCTGATTATCCTTTCAAGCC
CCCAAAGGTTGCTTTTAGGACCAAAGGTCTTCCACCCGAACATCGACAGC
AATGGAAGCATCTGTCTTGATATCCTTAAAGAACAGTGGAATCCCTGCGC
TTAACCTTTCAAAGATGGTGAAATTGTAACACGAATGCACGATATAATGC
GGAAGAATGATTGGATGATGAATACATTTAAAGGTGAATATGGGACTTCC
ACACAACCTAACTTCACCCCTGACATTAGATAGAAGCCTTATAAACAAAA
AAGAATAAAAATACTAAAAAAATAGATAAACATTTTCTAAAAAAAAAACA
CTGTAAAAACAGAAAAAATATAAGTAAAGGCACTCGAGAGAAACTCATAC
GGATTATACATCTACACTTATACTCGCCATGACACTCCATGCAGGAGATA
ACAACCAGTCTTGACGCATTAAAATAAAAAATAATTTAATATCATGATTA
CATATAGAGGACATAAATTGCTGTTTAACATTCGAGAAGACCAACCAACA
TAATGTCGATATTAAATATTTATATAAACAAATATAACAAAAAAAAAACA
GTTGATATACGAAGAGTGGCAATAAACGAATAGTCCATAAAACCTTGGAA
ACTAAAATTAATAGTATGACATCGTTCAACACGACGATATAATTTGTATT
TTGTAAGTAATTGCGAATGTTAATACGAATGTTGTGTTAT
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