EY692002

Overview
NameEY692002
Unique NameEY692002
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1040
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692002 vs. ExPASy Swiss-Prot
Match: UBE2A_HUMAN (Ubiquitin-conjugating enzyme E2 A OS=Homo sapiens GN=UBE2A PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 2.424e-11
Identity = 32/96 (33.33%), Postives = 51/96 (53.12%), Query Frame = 2
Query:  158 ASKRILKELKDLQKDPPTSCSAGPAAEDMFHWQATVMGPSDNPYADMQVYXXXXXXXXXXXXXXXQRLLLGPKVFHPNIDSNGSICLDILKEQWNP 445
            A +R++++ K LQ+DPP   S  P+  ++  W A + GP   P+ D                    R +   K+FHPN+ ++GSICLDIL+ +W+P
Sbjct:    5 ARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRFV--SKMFHPNVYADGSICLDILQNRWSP 98          
BLAST of EY692002 vs. ExPASy Swiss-Prot
Match: UBC2_ARATH (Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana GN=UBC2 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.424e-11
Identity = 34/96 (35.42%), Postives = 50/96 (52.08%), Query Frame = 2
Query:  158 ASKRILKELKDLQKDPPTSCSAGPAAEDMFHWQATVMGPSDNPYADMQVYXXXXXXXXXXXXXXXQRLLLGPKVFHPNIDSNGSICLDILKEQWNP 445
            A KR++++ K LQ+DPP   S  P   ++  W A + GP D P+                      R +   ++FHPNI ++GSICLDIL+ QW+P
Sbjct:    5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFV--SRMFHPNIYADGSICLDILQNQWSP 98          
BLAST of EY692002 vs. ExPASy Swiss-Prot
Match: UBC1_ARATH (Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana GN=UBC1 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.424e-11
Identity = 34/96 (35.42%), Postives = 50/96 (52.08%), Query Frame = 2
Query:  158 ASKRILKELKDLQKDPPTSCSAGPAAEDMFHWQATVMGPSDNPYADMQVYXXXXXXXXXXXXXXXQRLLLGPKVFHPNIDSNGSICLDILKEQWNP 445
            A KR++++ K LQ+DPP   S  P   ++  W A + GP D P+                      R +   ++FHPNI ++GSICLDIL+ QW+P
Sbjct:    5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFV--SRMFHPNIYADGSICLDILQNQWSP 98          
BLAST of EY692002 vs. ExPASy Swiss-Prot
Match: UBC2_DICDI (Ubiquitin-conjugating enzyme E2 2 OS=Dictyostelium discoideum GN=ubc2 PE=3 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 3.166e-11
Identity = 33/96 (34.38%), Postives = 50/96 (52.08%), Query Frame = 2
Query:  158 ASKRILKELKDLQKDPPTSCSAGPAAEDMFHWQATVMGPSDNPYADMQVYXXXXXXXXXXXXXXXQRLLLGPKVFHPNIDSNGSICLDILKEQWNP 445
            A +R++++ K LQ DPP   S  P   ++  WQA + GP D+ +                      + L   K+FHPN+ ++GSICLDIL+ QW+P
Sbjct:    5 ARRRLMRDFKRLQSDPPAGISGAPLENNILMWQAVIFGPDDSIWEGATFKLSLQFSEEYPNDAPTVKFL--SKMFHPNVYADGSICLDILQNQWSP 98          
BLAST of EY692002 vs. ExPASy Swiss-Prot
Match: UBC2_NEUCR (Ubiquitin-conjugating enzyme E2 2 OS=Neurospora crassa GN=mus-8 PE=3 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 4.135e-11
Identity = 29/96 (30.21%), Postives = 52/96 (54.17%), Query Frame = 2
Query:  158 ASKRILKELKDLQKDPPTSCSAGPAAEDMFHWQATVMGPSDNPYADMQVYXXXXXXXXXXXXXXXQRLLLGPKVFHPNIDSNGSICLDILKEQWNP 445
            A +R++++ K +Q DPP   SA P  +++  W A ++GP+D P+ D                    + +   ++FHPN+ + G +CLDIL+ +W+P
Sbjct:    5 ARRRLMRDFKRMQTDPPAGVSASPVPDNVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPSVKFI--SEMFHPNVYATGELCLDILQNRWSP 98          
BLAST of EY692002 vs. ExPASy Swiss-Prot
Match: UBC2_NECHA (Ubiquitin-conjugating enzyme E2 2 OS=Nectria haematococca GN=UBC2 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 4.135e-11
Identity = 29/96 (30.21%), Postives = 52/96 (54.17%), Query Frame = 2
Query:  158 ASKRILKELKDLQKDPPTSCSAGPAAEDMFHWQATVMGPSDNPYADMQVYXXXXXXXXXXXXXXXQRLLLGPKVFHPNIDSNGSICLDILKEQWNP 445
            A +R++++ K +Q DPP   SA P  +++  W A ++GP+D P+ D                    + +   ++FHPN+ + G +CLDIL+ +W+P
Sbjct:    5 ARRRLMRDFKRMQTDPPAGVSASPVPDNVMTWNAVIIGPADTPFEDGTFRLVMQFEEQYPNKPPQVKFI--SEMFHPNVYATGELCLDILQNRWSP 98          
BLAST of EY692002 vs. ExPASy Swiss-Prot
Match: UBC2_MEDSA (Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa GN=UBC2 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 4.135e-11
Identity = 34/96 (35.42%), Postives = 49/96 (51.04%), Query Frame = 2
Query:  158 ASKRILKELKDLQKDPPTSCSAGPAAEDMFHWQATVMGPSDNPYADMQVYXXXXXXXXXXXXXXXQRLLLGPKVFHPNIDSNGSICLDILKEQWNP 445
            A KR++++ K LQ DPP   S  P   ++  W A + GP D P+                      R +   ++FHPNI ++GSICLDIL+ QW+P
Sbjct:    5 ARKRLMRDFKRLQHDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFV--SRMFHPNIYADGSICLDILQNQWSP 98          
BLAST of EY692002 vs. ExPASy Swiss-Prot
Match: UBC2_YEAST (Ubiquitin-conjugating enzyme E2 2 OS=Saccharomyces cerevisiae GN=RAD6 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.400e-11
Identity = 31/96 (32.29%), Postives = 52/96 (54.17%), Query Frame = 2
Query:  158 ASKRILKELKDLQKDPPTSCSAGPAAEDMFHWQATVMGPSDNPYADMQVYXXXXXXXXXXXXXXXQRLLLGPKVFHPNIDSNGSICLDILKEQWNP 445
            A +R++++ K +++D P   SA P  +++  W A ++GP+D PY D                    + L   ++FHPN+ +NG ICLDIL+ +W P
Sbjct:    5 ARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFL--SEMFHPNVYANGEICLDILQNRWTP 98          
BLAST of EY692002 vs. ExPASy Swiss-Prot
Match: UBC2_WHEAT (Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.400e-11
Identity = 34/96 (35.42%), Postives = 50/96 (52.08%), Query Frame = 2
Query:  158 ASKRILKELKDLQKDPPTSCSAGPAAEDMFHWQATVMGPSDNPYADMQVYXXXXXXXXXXXXXXXQRLLLGPKVFHPNIDSNGSICLDILKEQWNP 445
            A KR++++ K LQ+DPP   S  P   ++  W A + GP D P+                      R +   ++FHPNI ++GSICLDIL+ QW+P
Sbjct:    5 ARKRLMRDFKRLQQDPPAGISGAPHDNNITLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFV--SRMFHPNIYADGSICLDILQNQWSP 98          
BLAST of EY692002 vs. ExPASy Swiss-Prot
Match: UBC2_KLULA (Ubiquitin-conjugating enzyme E2 2 OS=Kluyveromyces lactis GN=UBC2 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.400e-11
Identity = 31/96 (32.29%), Postives = 52/96 (54.17%), Query Frame = 2
Query:  158 ASKRILKELKDLQKDPPTSCSAGPAAEDMFHWQATVMGPSDNPYADMQVYXXXXXXXXXXXXXXXQRLLLGPKVFHPNIDSNGSICLDILKEQWNP 445
            A +R++++ K +++D P   SA P  +++  W A ++GP+D PY D                    + L   ++FHPN+ +NG ICLDIL+ +W P
Sbjct:    5 ARRRLMRDFKRMKEDSPPGVSASPLPDNVMIWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFL--SEMFHPNVYANGEICLDILQNRWTP 98          
The following BLAST results are available for this feature:
BLAST of EY692002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
UBE2A_HUMAN2.424e-1133.33Ubiquitin-conjugating enzyme E2 A OS=Homo sapiens ... [more]
UBC2_ARATH2.424e-1135.42Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis t... [more]
UBC1_ARATH2.424e-1135.42Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis t... [more]
UBC2_DICDI3.166e-1134.38Ubiquitin-conjugating enzyme E2 2 OS=Dictyostelium... [more]
UBC2_NEUCR4.135e-1130.21Ubiquitin-conjugating enzyme E2 2 OS=Neurospora cr... [more]
UBC2_NECHA4.135e-1130.21Ubiquitin-conjugating enzyme E2 2 OS=Nectria haema... [more]
UBC2_MEDSA4.135e-1135.42Ubiquitin-conjugating enzyme E2 2 OS=Medicago sati... [more]
UBC2_YEAST5.400e-1132.29Ubiquitin-conjugating enzyme E2 2 OS=Saccharomyces... [more]
UBC2_WHEAT5.400e-1135.42Ubiquitin-conjugating enzyme E2 2 OS=Triticum aest... [more]
UBC2_KLULA5.400e-1132.29Ubiquitin-conjugating enzyme E2 2 OS=Kluyveromyces... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-086-D03-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692002 ID=EY692002; Name=EY692002; organism=Citrus sinensis; type=EST; length=1040bp
GTTCACGAAGGAAGCGAGGCGTGGGGCGGCTTGACGACGTAGATCTGCTT
CACCGTTTCGCTTTCTCGACGCTATTACCCTACGATCCTGTTCTCTGCCG
CGCAAGGTCTTAAGGTTCGTTGTAGCTTTAATTTTAATAACCCCTTGAAG
AGTCATGGCTTCAAAGCGTATTTTGAAGGAACTCAAGGATCTGCAAAAGG
ATCCTCCCACATCTTGCAGCGCTGGCCCTGCGGCTGAAGACATGTTCCAC
TGGCAAGCCACAGTTATGGGCCCTTCTGATAACCCATATGCTGATATGCA
GGTGTATTTTTAGTTGCCATTAATTTTCCTCCTGATTATCCTTTCAAGCC
CCCAAAGGTTGCTTTTAGGACCAAAGGTCTTCCACCCGAACATCGACAGC
AATGGAAGCATCTGTCTTGATATCCTTAAAGAACAGTGGAATCCCTGCGC
TTAACCTTTCAAAGATGGTGAAATTGTAACACGAATGCACGATATAATGC
GGAAGAATGATTGGATGATGAATACATTTAAAGGTGAATATGGGACTTCC
ACACAACCTAACTTCACCCCTGACATTAGATAGAAGCCTTATAAACAAAA
AAGAATAAAAATACTAAAAAAATAGATAAACATTTTCTAAAAAAAAAACA
CTGTAAAAACAGAAAAAATATAAGTAAAGGCACTCGAGAGAAACTCATAC
GGATTATACATCTACACTTATACTCGCCATGACACTCCATGCAGGAGATA
ACAACCAGTCTTGACGCATTAAAATAAAAAATAATTTAATATCATGATTA
CATATAGAGGACATAAATTGCTGTTTAACATTCGAGAAGACCAACCAACA
TAATGTCGATATTAAATATTTATATAAACAAATATAACAAAAAAAAAACA
GTTGATATACGAAGAGTGGCAATAAACGAATAGTCCATAAAACCTTGGAA
ACTAAAATTAATAGTATGACATCGTTCAACACGACGATATAATTTGTATT
TTGTAAGTAATTGCGAATGTTAATACGAATGTTGTGTTAT
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