EY691978

Overview
NameEY691978
Unique NameEY691978
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length970
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY691978 vs. ExPASy Swiss-Prot
Match: UCRI_PONPY (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Pongo pygmaeus GN=UQCRFS1 PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 8.825e-37
Identity = 71/149 (47.65%), Postives = 101/149 (67.79%), Query Frame = 3
Query:    9 SKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDTQEDSVRVKNPEWLVVVGVCTHLGCIPCKNGGDFGGWINPCHG*HDDISEWIHIGTSPSN 455
            +++ F+Y +        A   + ++ +FV SMSAS DVLALA +E+ LS I  G  +T KWRGKP+F+R RT+++I+   +V+++ LRD Q D  RVK PEW++++GVCTHLGC+P  N GDFGG+  PCHG H D S  I +G +P N
Sbjct:  109 ARKGFSYLVTGVTTVGVAYAAKNVVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMTFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLN 257          
BLAST of EY691978 vs. ExPASy Swiss-Prot
Match: UCRI_THEGE (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Theropithecus gelada GN=UQCRFS1 PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.966e-36
Identity = 67/149 (44.97%), Postives = 101/149 (67.79%), Query Frame = 3
Query:    9 SKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDTQEDSVRVKNPEWLVVVGVCTHLGCIPCKNGGDFGGWINPCHG*HDDISEWIHIGTSPSN 455
            +++ F+Y +        A   +  + +F+ SMSAS DVLA+A +E++LS I  G  +  KWRGKP+F+R RT+++I+   +V+++ LRD Q D  RVK PEW++++G+CTHLGC+P  N GDFGG+  PCHG H D+S  I +G +P N
Sbjct:  109 ARKGFSYLVTAVTTVGVAYAAKNAVTQFISSMSASADVLAMAKIEINLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGICTHLGCVPIANAGDFGGYYCPCHGSHYDVSGRIRLGPAPLN 257          
BLAST of EY691978 vs. ExPASy Swiss-Prot
Match: UCRI_HYLSY (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Hylobates syndactylus GN=UQCRFS1 PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 3.353e-36
Identity = 70/149 (46.98%), Postives = 99/149 (66.44%), Query Frame = 3
Query:    9 SKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDTQEDSVRVKNPEWLVVVGVCTHLGCIPCKNGGDFGGWINPCHG*HDDISEWIHIGTSPSN 455
            +++ F+Y +        A   +  + +FV SMSAS DVLALA +E+ LS I  G  +  KWRGKP+F+R RT+++I+   +V+++ LRD Q D  RVK PEW++++GVCTHLGC+P  N GDFGG+  PCHG H D S  I +G +P N
Sbjct:  109 ARKGFSYLVTAVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKRPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLN 257          
BLAST of EY691978 vs. ExPASy Swiss-Prot
Match: UCRI_COLPO (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Colobus polykomos GN=UQCRFS1 PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 3.353e-36
Identity = 70/149 (46.98%), Postives = 100/149 (67.11%), Query Frame = 3
Query:    9 SKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDTQEDSVRVKNPEWLVVVGVCTHLGCIPCKNGGDFGGWINPCHG*HDDISEWIHIGTSPSN 455
            ++++F+Y +        A   +  + +FV SMSAS DVLA+A +EV LS I  G  +  KWRGKP+F+R RT+++I+   +V+++ LRD Q D  RVK PEW++++GVCTHLGC+P  N GDFGG+  PCHG H D S  I +G +P N
Sbjct:  109 ARKSFSYMVTAVTTVGVAYAAKNAVTQFVSSMSASADVLAMAKIEVKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLN 257          
BLAST of EY691978 vs. ExPASy Swiss-Prot
Match: UCRI_CERAE (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cercopithecus aethiops GN=UQCRFS1 PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 3.353e-36
Identity = 68/149 (45.64%), Postives = 101/149 (67.79%), Query Frame = 3
Query:    9 SKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDTQEDSVRVKNPEWLVVVGVCTHLGCIPCKNGGDFGGWINPCHG*HDDISEWIHIGTSPSN 455
            +++ F+Y +        A   + ++ +F+ SMSAS DVLA+A +E++LS I  G  +  KWRGKP+F+R RT+++I+   +V+++ LRD Q D  RVK PEW++++GVCTHLGC+P  N GDFGG+  PCHG H D S  I +G +P N
Sbjct:  109 ARKGFSYLVTAVTTVGVAYAAKNVVTQFISSMSASADVLAMAKIEINLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEEEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLN 257          
BLAST of EY691978 vs. ExPASy Swiss-Prot
Match: UCRI_PANTR (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Pan troglodytes GN=UQCRFS1 PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 5.720e-36
Identity = 70/149 (46.98%), Postives = 99/149 (66.44%), Query Frame = 3
Query:    9 SKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDTQEDSVRVKNPEWLVVVGVCTHLGCIPCKNGGDFGGWINPCHG*HDDISEWIHIGTSPSN 455
            +++ F+Y +        A   +  + +FV SMSAS DVLALA +E+ LS I  G  +  KWRGKP+F+R RT+++I+   +V+++ LRD Q D  RVK PEW++++GVCTHLGC+P  N GDFGG+  PCHG H D S  I +G +P N
Sbjct:  109 ARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLN 257          
BLAST of EY691978 vs. ExPASy Swiss-Prot
Match: UCRI_PANPA (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Pan paniscus GN=UQCRFS1 PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 5.720e-36
Identity = 70/149 (46.98%), Postives = 99/149 (66.44%), Query Frame = 3
Query:    9 SKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDTQEDSVRVKNPEWLVVVGVCTHLGCIPCKNGGDFGGWINPCHG*HDDISEWIHIGTSPSN 455
            +++ F+Y +        A   +  + +FV SMSAS DVLALA +E+ LS I  G  +  KWRGKP+F+R RT+++I+   +V+++ LRD Q D  RVK PEW++++GVCTHLGC+P  N GDFGG+  PCHG H D S  I +G +P N
Sbjct:  109 ARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLN 257          
BLAST of EY691978 vs. ExPASy Swiss-Prot
Match: UCRI_HUMAN (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Homo sapiens GN=UQCRFS1 PE=1 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 5.720e-36
Identity = 70/149 (46.98%), Postives = 99/149 (66.44%), Query Frame = 3
Query:    9 SKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDTQEDSVRVKNPEWLVVVGVCTHLGCIPCKNGGDFGGWINPCHG*HDDISEWIHIGTSPSN 455
            +++ F+Y +        A   +  + +FV SMSAS DVLALA +E+ LS I  G  +  KWRGKP+F+R RT+++I+   +V+++ LRD Q D  RVK PEW++++GVCTHLGC+P  N GDFGG+  PCHG H D S  I +G +P N
Sbjct:  109 ARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLN 257          
BLAST of EY691978 vs. ExPASy Swiss-Prot
Match: UCRI_GORGO (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Gorilla gorilla gorilla GN=UQCRFS1 PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 5.720e-36
Identity = 70/149 (46.98%), Postives = 99/149 (66.44%), Query Frame = 3
Query:    9 SKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDTQEDSVRVKNPEWLVVVGVCTHLGCIPCKNGGDFGGWINPCHG*HDDISEWIHIGTSPSN 455
            +++ F+Y +        A   +  + +FV SMSAS DVLALA +E+ LS I  G  +  KWRGKP+F+R RT+++I+   +V+++ LRD Q D  RVK PEW++++GVCTHLGC+P  N GDFGG+  PCHG H D S  I +G +P N
Sbjct:  109 ARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLN 257          
BLAST of EY691978 vs. ExPASy Swiss-Prot
Match: UCRI_CHICK (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Gallus gallus GN=UQCRFS1 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 5.720e-36
Identity = 71/148 (47.97%), Postives = 95/148 (64.19%), Query Frame = 3
Query:   12 KRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDTQEDSVRVKNPEWLVVVGVCTHLGCIPCKNGGDFGGWINPCHG*HDDISEWIHIGTSPSN 455
            ++ F+Y +        A   + ++ +F+ S+SAS DVLAL+ +E+ LS I  G  V  KWRGKP+F+R RT+ +I     VDV+ LRD Q D  RVK PEW+++VGVCTHLGC+P  N GDFGG+  PCHG H D S  I  G +P N
Sbjct:  108 RKGFSYLVTATACVATAYAAKNVVTQFISSLSASADVLALSKIEIKLSDIPEGKNVAFKWRGKPLFVRHRTQAEINQEAEVDVSKLRDPQHDLDRVKKPEWVILVGVCTHLGCVPIANSGDFGGYYCPCHGSHYDASGRIRKGPAPYN 255          
The following BLAST results are available for this feature:
BLAST of EY691978 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
UCRI_PONPY8.825e-3747.65Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
UCRI_THEGE1.966e-3644.97Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
UCRI_HYLSY3.353e-3646.98Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
UCRI_COLPO3.353e-3646.98Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
UCRI_CERAE3.353e-3645.64Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
UCRI_PANTR5.720e-3646.98Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
UCRI_PANPA5.720e-3646.98Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
UCRI_HUMAN5.720e-3646.98Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
UCRI_GORGO5.720e-3646.98Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
UCRI_CHICK5.720e-3647.97Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-086-A06-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY691978 ID=EY691978; Name=EY691978; organism=Citrus sinensis; type=EST; length=970bp
GTGACGCCAGCAAGCGTGCATTTGCTTATTTTATCTTGACAGGTGGCAGG
TTTGTGTATGCCTCCTTAATTCGTCTTTTGATCCTCAAGTTTGTTCTTAG
CATGTCTGCGAGCAAAGATGTCCTTGCCCTTGCCTCCCTTGAGGTTGACC
TATCCAGCATTGAACCCGGGACTACTGTTACAGTCAAGTGGCGTGGGAAG
CCTGTTTTCATCAGGCGTCGGACTGAAGAGGATATTCAGTTGGCTAACAG
TGTTGATGTAGCGTCACTCCGGGACACGCAGGAAGATTCTGTCAGGGTTA
AGAATCCAGAATGGCTTGTCGTTGTTGGTGTGTGCACACATTTGGGGTGC
ATTCCATGTAAAAATGGTGGTGACTTTGGAGGTTGGATCAACCCCTGCCA
TGGATAGCACGATGACATATCTGAGTGGATACACATAGGGACATCACCTT
CAAATCAGTGGTACCGAATCAGCACTCATGGACGACAAAATATAAAGAAT
GGCTGCAAATACAAAATGGATACAATATAAAAACAACCACTAACGACGAG
AAAGGCTAACACCACCTACCCATACACTGTAGAACAAGCCTCAGAAGAAC
ATATTGTAAAGATAGCATGTGAAAATGCATCAACAATGCGTACATCAACC
AACTCACGAAAGCCTAACATAGAAGCGATTGCACAATAGAGTGACAGAAG
AAACCATAAACGCTAATCCGACCGCAGAACGCACCACCGGAACAAAACCA
ACAAGAGGGATAACTAGAACAATGACAGGACGACGACGAATCCCACACCG
ACTCATAAGCACAAACCACACCATGAGACTCAGAAACAACCAAACTGATG
GCAGACAAAGCAAAAGCCGAGAAGGAAAGCTACGCATAAGACAAATAAGA
AACAACACGACGAACGCAAAACTGTCTGGAATAACATAAAAAACTCAAGA
AAACGATGAGAAAGAAATTA
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